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1.
J Environ Sci (China) ; 149: 242-253, 2025 Mar.
Artículo en Inglés | MEDLINE | ID: mdl-39181639

RESUMEN

Poly(butylene succinate-co-furandicarboxylate) (PBSF) and poly(butylene adipate-co-furandicarboxylate) (PBAF) are novel furandicarboxylic acid-based biodegradable copolyesters with great potential to replace fossil-derived terephthalic acid-based copolyesters such as poly(butylene succinate-co-terephthalate) (PBST) and poly(butylene adipate-co-terephthalate) (PBAT). In this study, quantum chemistry techniques after molecular dynamics simulations are employed to investigate the degradation mechanism of PBSF and PBAF catalyzed by Candida antarctica lipase B (CALB). Computational analysis indicates that the catalytic reaction follows a four-step mechanism resembling the ping-pong bibi mechanism, with the initial two steps being acylation reactions and the subsequent two being hydrolysis reactions. Notably, the first step of the hydrolysis is identified as the rate-determining step. Moreover, by introducing single-point mutations to expand the substrate entrance tunnel, the catalytic distance of the first acylation step decreases. Additionally, energy barrier of the rate-determining step is decreased in the PBSF system by site-directed mutations on key residues increasing hydrophobicity of the enzyme's active site. This study unprecedently show the substrate binding pocket and hydrophobicity of the enzyme's active site have the potential to be engineered to enhance the degradation of copolyesters catalyzed by CALB.


Asunto(s)
Proteínas Fúngicas , Lipasa , Poliésteres , Lipasa/metabolismo , Lipasa/química , Proteínas Fúngicas/metabolismo , Proteínas Fúngicas/química , Poliésteres/química , Poliésteres/metabolismo , Biodegradación Ambiental , Simulación de Dinámica Molecular , Hidrólisis , Modelos Químicos
2.
Chemosphere ; 364: 143241, 2024 Sep 03.
Artículo en Inglés | MEDLINE | ID: mdl-39236919

RESUMEN

Polychlorinated biphenyl compounds (PCBs) are industrial chemicals whose production was discontinued in the early nineties in most countries. Sill, PCBs are detectable in pristine and remote locations. Occurrence in regions such as Southern Oceans and Antarctica are influenced by the global, and regional, cycling. Here, we studied the surface and deep ocean distribution of indicator- and dioxin-like PCB congeners in the Southern Indian Ocean (SIO), and the coast of Antarctica (COA) during the tenth Indian Southern Ocean Expedition (SOE-10), December 2017-February 2018. ∑21PCBs in SIO surface waters ranged from 3.8 to 167.1 pg L-1 (average ± standard deviation: 35.7 ± 48.4 pg L-1), and in COA from 1.0 to 41.8 pg L-1 (13.8 ± 12.7 pg L-1), respectively. A noticeable gradient was observed, with higher PCBs levels in northern latitudes than southern latitudes in the SIO, and higher levels in the eastern longitudes compared to western longitudes in the COA. Results suggest the influence of secondary sources, or re-emission, of PCBs in the Southern Oceans and Antarctica. Both regions showed notable PCB levels in surface and deep waters (up to 1000 m) due to ongoing surface sources and remineralization processes in deeper waters. Multimedia modeling with the global model (BETR-Global) suggests the SIO act as a net sink for PCBs in the ocean.

3.
FEMS Microbiol Ecol ; 2024 Sep 17.
Artículo en Inglés | MEDLINE | ID: mdl-39289026

RESUMEN

Mt. Erebus, Antarctica, is the southernmost active volcano in the world and harbors diverse geothermally unique ecosystems, including 'Subglacial' and 'Exposed' features, surrounded by a vast desert of ice and snow. Previous studies, while limited in scope, have highlighted the unique and potentially endemic biota of Mt. Erebus. Here, we provide an amplicon-based biodiversity study across all domains of life and all types of geothermal features, with physicochemical and biological data from 48 samples (39 Exposed and 9 Subglacial) collected through various field seasons. We found potentially high taxonomic novelty among prokaryotes and fungi, supporting past hypotheses of high endemism due to the distinctive and isolated environment; in particular, the large number of taxonomically divergent fungal sequences was surprising. We found that different site types had unique physicochemistry and biota; Exposed sites were warmer than Subglacial (median: 40 vs 10°C for Exposed and Subglacial, respectively) and tended to have more photosynthetic organisms (Cyanobacteria and Chlorophyta). Subglacial sites had more Actinobacteriota, correlated with greater concentrations of Ca and Mg present. Our results also suggest potential human impacts on these remote, highly significant sites, finding evidence for fungal taxa normally associated with wood decay. In this study, we provide a blueprint for future work aimed at better understanding the novel biota of Mt. Erebus.

4.
Mar Pollut Bull ; 208: 116961, 2024 Sep 17.
Artículo en Inglés | MEDLINE | ID: mdl-39293370

RESUMEN

Microplastics are present even in remote regions like the Southern Ocean. Once in the water, they are rapidly colonised by marine microorganisms, forming the plastisphere. To address this issue in Antarctic waters, we conducted a microcosm experiment by incubating polypropylene, polyethylene, polystyrene microplastic pellets, and quartz for 33 days on Livingston Island, South Shetland Islands, Antarctica. We analysed plastic colonisation and plastisphere dynamics using scanning electron microscopy, flow cytometry, bacterial cultivation, qPCR, and 16S rRNA gene metabarcoding. Our results show rapid and consistent colonisation, although biomass formation was slightly slower than in other oceans, indicating unique environmental constraints. Time was the main factor influencing biofilm communities, while plastic polymer types had little effect. We observed a transition in microbial communities from early- to late-biofilm stages between days 12 and 19. Additionally, we described the bacterial plastisphere composition in this Antarctic environment, including the presence of hydrocarbon-degrading bacteria.

5.
Int J Mol Sci ; 25(15)2024 Aug 03.
Artículo en Inglés | MEDLINE | ID: mdl-39126044

RESUMEN

Biological invasions are now seen as one of the main threats to the Antarctic ecosystem. An example of such an invasion is the recent colonization of the H. Arctowski Polish Antarctic Station area by the non-native grass Poa annua. This site was previously occupied only by native plants like the Antarctic hair grass Deschampsia antarctica. To adapt successfully to new conditions, plants interact with soil microorganisms, including fungi. The aim of this study was to determine how the newly introduced grass P. annua established an interaction with fungi compared to resident grass D. antarctica. We found that fungal diversity in D. antarctica roots was significantly higher compared with P. annua roots. D. antarctica managed a biodiverse microbiome because of its ability to recruit fungal biocontrol agents from the soil, thus maintaining a beneficial nature of the endophyte community. P. annua relied on a set of specific fungal taxa, which likely modulated its cold response, increasing its competitiveness in Antarctic conditions. Cultivated endophytic fungi displayed strong chitinolysis, pointing towards their role as phytopathogenic fungi, nematode, and insect antagonists. This is the first study to compare the root mycobiomes of both grass species by direct culture-independent techniques as well as culture-based methods.


Asunto(s)
Ecosistema , Endófitos , Hongos , Especies Introducidas , Poaceae , Regiones Antárticas , Poaceae/microbiología , Hongos/clasificación , Hongos/fisiología , Endófitos/fisiología , Raíces de Plantas/microbiología , Microbiología del Suelo , Micobioma , Poa/microbiología , Biodiversidad
6.
J Hazard Mater ; 478: 135519, 2024 Oct 05.
Artículo en Inglés | MEDLINE | ID: mdl-39151362

RESUMEN

Despite growing concerns regarding the long-range transport (LRT) and ecological risks of organophosphate esters (OPEs), information on the environmental behaviors of OPEs in polar terrestrial ecosystems remains inadequate. In the present study, 10 OPEs were analyzed in soil and vegetation samples collected from Fildes Peninsula, Antarctica. The OPE concentrations in Antarctic soils, mosses, and lichens ranged from 0.87 to 15.7 ng/g dry weight (dw), 9.8 to 113 ng/g dw, and 3.6 to 75.2 ng/g dw, respectively. Non-chlorinated OPEs predominated in terrestrial matrices, accounting for approximately 76 % of the OPE composition. Source identification indicated that OPE contamination in Antarctica likely resulted from local anthropogenic sources and LRT. Moreover, the bioaccumulation behavior of OPEs from soil to vegetation was assessed using bioconcentration factors (BCFs), revealing a significant non-linear trend of initial increase and subsequent decrease in BCFs relative to the lipophilicities of the octanol-air partition coefficient (log KOA) and octanol-water partition coefficient (log KOW). While low levels of OPEs in Antarctic terrestrial environments were reported in this study, their sustained inputs and potential ecological risks in polar regions warrant further attention.


Asunto(s)
Monitoreo del Ambiente , Ésteres , Líquenes , Organofosfatos , Regiones Antárticas , Organofosfatos/análisis , Organofosfatos/metabolismo , Líquenes/química , Líquenes/metabolismo , Ésteres/análisis , Briófitas/química , Briófitas/metabolismo , Bioacumulación , Contaminantes del Suelo/análisis , Contaminantes del Suelo/metabolismo , Suelo/química , Contaminantes Ambientales/análisis , Contaminantes Ambientales/metabolismo
7.
Sci Total Environ ; 949: 175221, 2024 Nov 01.
Artículo en Inglés | MEDLINE | ID: mdl-39097013

RESUMEN

The increasing global concern over microplastic pollution has driven a surge in research efforts aimed at detecting microplastics across various ecosystems. Airborne microplastics (MPs) have been identified in remote environments worldwide, including Antarctica. However, data on bulk atmospheric deposition remain scarce. From January to December 2020, atmospheric deposition was directly collected using passive samplers placed in eight sites across Victoria Land. Using Raman Microspectroscopy, MPs were identified in six out of the seven samples collected (one sample was lost due to the extreme weather conditions). The average daily MP deposition for Victoria Land was 1.7 ± 1.1 MPs m-2 d-1, with values ranging from 0.76 to 3.44 MPs m-2 d-1. The majority (53 %) of MPs found in the atmospheric deposition were in the size class of 5-10 µm, and the main shape of MPs was fragments (95 %). The predominant plastic type was polypropylene (31 %), followed by polyethylene (19 %) and polycarbonate (12 %). Polystyrene, polyester, styrene and polyethylene terephthalate each accounted for ~6 %. Microplastics identified in the coastal sites may have local origins, potentially associated with scientific activities at research stations. Conversely, a backward trajectories analysis suggested a potential contribution of atmospheric transport to microplastic deposition at Larsen Glacier and Tourmaline Plateau, the two most remote sites of the study area, where the highest MP concentrations were detected. Our findings present the first evidence of microplastics in the Antarctic atmospheric deposition directly collected via passive samplers, highlighting the need for continued monitoring and research to assess the environmental impact of MPs, particularly in sensitive and remote ecosystems like Antarctica.

8.
Sci Total Environ ; 951: 175361, 2024 Nov 15.
Artículo en Inglés | MEDLINE | ID: mdl-39117209

RESUMEN

The prevalence of microplastics (MPs, <5 mm) in natural environments presents a formidable global environmental threat MPs can be found from the Arctic to Antarctica, including glaciers. Despite their widespread distribution, studies on MP accumulation in apex predators inhabiting Polar Regions remain limited. The objective of this study was to conduct a comprehensive examination, for the first time, of MP bioaccumulation in various organs and tissue of Adélie penguins. This investigation comprehends the gastrointestinal tract (GIT), scat, internal organ (lung, trachea, spleen, and liver) and tissue (muscle) samples collected from Svenner Island, Antarctica during the 39th Indian expedition to Antarctica in 2019-2020. Our analyses revealed the presence of 34 MPs across the GIT, scat, lung, and trachea samples, with no MPs detected in muscle, spleen, or liver tissues. Blue-colored microfibers (>50 %) and MPs smaller than 1 mm (38 %) in size were prominently observed. Polymer characterization utilizing µ-FTIR spectroscopy identified low-density polyethylene (LDPE) (~63 %) as the predominant polymer type. The accumulation of MP fibers in the gastrointestinal tract and scat of Adélie penguins may originate from marine ambient media and prey organisms. Furthermore, the presence of LDPE fibers in the trachea and lungs likely occurred through inhalation and subsequent deposition of MPs originating from both local and long-range airborne sources. The identification of fibers ranging between 20 and 100 µm within the trachea suggests a plausible chance of cellular deposition of MPs. Overall our findings provide valuable insights into the organ-specific accumulation of MPs in apex predators. Adélie penguins emerge as promising environmental bio-monitoring species, offering insights into the potential trophic transfer of MPs within frigid environments.


Asunto(s)
Monitoreo del Ambiente , Microplásticos , Spheniscidae , Animales , Spheniscidae/metabolismo , Regiones Antárticas , Microplásticos/análisis , Contaminantes Químicos del Agua/análisis , Contaminantes Químicos del Agua/metabolismo , Islas , Bioacumulación
9.
Sci Total Environ ; 951: 175582, 2024 Nov 15.
Artículo en Inglés | MEDLINE | ID: mdl-39159696

RESUMEN

Global microplastic pollution has garnered widespread attention from researchers both domestically and internationally. However, compared to other regions worldwide, little is known about microplastic pollution in the marine ecosystems of the Antarctic region. This study investigated the abundance and characteristics of microplastics (MPs) in the gills and intestines of 15 species of Antarctic fish and Antarctic krill (Euphausia superba). The results indicate that the abundance of MPs in Antarctic fish and E. superba ranged from 0.625 to 2.0 items/individual and 0.17 to 0.27 items/individual, with mean abundances of 0.93 ± 0.96 items/individual and 0.23 ± 0.44 items/individual, respectively. Antarctic fish ingested significantly more MPs than E. superba. There was no significant difference in the abundance of MPs between the gills and intestines of Antarctic fish. However, the quantity of pellet-shaped MPs in the gills was significantly higher than in the intestines. The depth of fish habitat influenced the quantity and size of MPs in their bodies, with benthic fish ingesting significantly fewer MPs than pelagic fish. Pelagic fish ingested significantly more MPs sized 1-5 mm than benthic fish. Additionally, analysis of the characteristics of MPs revealed that fiber-shaped MPs were predominant in shape, with sizes generally smaller than 0.25 mm and 0.25-0.5 mm. The predominant colors of MPs were transparent, red, and black, while the main materials were polypropylene (PP), polystyrene (PS), polyamide (PA), and polyvinyl chloride (PVC). Compared to organisms from other regions, the levels of MPs in Antarctic fish and E. superba were relatively low. This study contributes to a better understanding of the extent of MP pollution in Antarctic fish and E. superba, aiding human efforts to mitigate its impact on the environment.


Asunto(s)
Monitoreo del Ambiente , Euphausiacea , Peces , Microplásticos , Contaminantes Químicos del Agua , Animales , Regiones Antárticas , Microplásticos/análisis , Contaminantes Químicos del Agua/análisis , Contaminantes Químicos del Agua/metabolismo , Peces/metabolismo
10.
Sci Rep ; 14(1): 18607, 2024 Aug 10.
Artículo en Inglés | MEDLINE | ID: mdl-39127802

RESUMEN

The Oldest Ice Reconnaissance (OIR) airborne geophysical survey in East Antarctica was flown over approximately 170,000 km2 of the Dome Fuji region in 2016/17. The survey's results support new insights into the subglacial geology and its meaning for the tectonic histories of the supercontinents Rodinia and Gondwana. The new magnetic and radar-derived bed topography data are integrated with previously acquired magnetic and gravity data, allowing the mapping of crustal domains within and beyond the survey's limits. The magnetic data reveal three distinct domains within the survey region, delineated by N-S oriented boundaries, partly aligned with gravity domains following upward continuation transformations for both datasets. Additionally, four primary sets of magnetic lineaments were identified, exhibiting correlations with topographic and gravity patterns. These correlations indicate the continuation of the Tonian Oceanic Arc Super Terrane (TOAST) southward of its previously known southern limit. Moreover, an E-W-trending magnetic anomaly, the Elbert magnetic anomaly, suggests the suture between the recently-proposed subglacial Valkyrie craton and the TOAST. Furthermore, the analysis reveals a broad scale shear zone, named here the OIR shear zone, which formed as a result of oblique collision of the Ruker and Valkyrie cratons during the amalgamation of Gondwana.

11.
Glob Chang Biol ; 30(8): e17452, 2024 Aug.
Artículo en Inglés | MEDLINE | ID: mdl-39162042

RESUMEN

Terrestrially breeding marine predators have experienced shifts in species distribution, prey availability, breeding phenology, and population dynamics due to climate change worldwide. These central-place foragers are restricted within proximity of their breeding colonies during the breeding season, making them highly susceptible to any changes in both marine and terrestrial environments. While ecologists have developed risk assessments to evaluate climate risk in various contexts, these often overlook critical breeding biology data. To address this knowledge gap, we developed a trait-based risk assessment framework, focusing on the breeding season and applying it to marine predators breeding in parts of Australian territory and Antarctica. Our objectives were to quantify climate change risk, identify specific threats, and establish an adaptable assessment framework. The assessment considered 25 criteria related to three risk components: vulnerability, exposure, and hazard, while accounting for uncertainty. We employed a scoring system that integrated a systematic literature review and expert elicitation for the hazard criteria. Monte Carlo sensitivity analysis was conducted to identify key factors contributing to overall risk. We identified shy albatross (Thalassarche cauta), southern rockhopper penguins (Eudyptes chrysocome), Australian fur seals (Arctocephalus pusillus doriferus), and Australian sea lions (Neophoca cinerea) with high climate urgency. Species breeding in lower latitudes, as well as certain eared seal, albatross, and penguin species, were particularly at risk. Hazard and exposure explained the most variation in relative risk, outweighing vulnerability. Key climate hazards affecting most species include extreme weather events, changes in habitat suitability, and prey availability. We emphasise the need for further research, focusing on at-risk species, and filling knowledge gaps (less-studied hazards, and/or species) to provide a more accurate and robust climate change risk assessment. Our findings offer valuable insights for conservation efforts, given that monitoring and implementing climate adaptation strategies for land-dependent marine predators is more feasible during their breeding season.


Asunto(s)
Cambio Climático , Animales , Medición de Riesgo , Conducta Predatoria , Regiones Antárticas , Spheniscidae/fisiología , Cadena Alimentaria
12.
Glob Chang Biol ; 30(8): e17467, 2024 Aug.
Artículo en Inglés | MEDLINE | ID: mdl-39168490

RESUMEN

Antarctica's unique marine ecosystems are threatened by the arrival of non-native marine species on rafting ocean objects. The harsh environmental conditions in Antarctica prevent the establishment of many such species, but warming around the continent and the opening up of ice-free regions may already be reducing these barriers. Although recent genomic work has revealed that rafts-potentially carrying diverse coastal passengers-reach Antarctica from sub-Antarctic islands, Antarctica's vulnerability to incursions from Southern Hemisphere continents remains unknown. Here we use 0.1° global ocean model simulations to explore whether drift connections exist between more northern, temperate landmasses and the Antarctic coastline. We show that passively floating objects can drift to Antarctica not only from sub-Antarctic islands, but also from continental locations north of the Subtropical Front including Australia, South Africa, South America and Zealandia. We find that the Antarctic Peninsula is the region at highest risk for non-native species introductions arriving by natural oceanic dispersal, highlighting the vulnerability of this region, which is also at risk from introductions via ship traffic and rapid warming. The widespread connections with sub-Antarctic and temperate landmasses, combined with an increasing abundance of marine anthropogenic rafting vectors, poses a growing risk to Antarctic marine ecosystems, especially as environmental conditions around Antarctica are projected to become more suitable for non-native species in the future.


Asunto(s)
Especies Introducidas , Regiones Antárticas , Ecosistema , Modelos Teóricos , Organismos Acuáticos/fisiología , Animales , Océanos y Mares
13.
Mar Pollut Bull ; 206: 116797, 2024 Sep.
Artículo en Inglés | MEDLINE | ID: mdl-39096866

RESUMEN

Microplastic (MP) particles can be found all around the planet, even in Antarctica where they can be locally originated or transported by marine currents and winds. In this communication, we identify and report for the first time the contribution of a wastewater treatment plant (WWTP) as a local source of MP particles in the region. The analysis of the entire sample using micro-Raman spectroscopy revealed an MP concentration that ranged from 64 to 159 particles per liter of wastewater. >90 % of the identified particles were smaller than 50 µm. Among those analyzed, microplastics were identified as polyethylene, polypropylene, polyvinyl chloride, polytetrafluoroethylene, polyethylene terephthalate, and polystyrene. These findings demonstrate the need for urgent policies and technologies to mitigate this MP contamination source.


Asunto(s)
Monitoreo del Ambiente , Microplásticos , Aguas Residuales , Contaminantes Químicos del Agua , Aguas Residuales/química , Regiones Antárticas , Contaminantes Químicos del Agua/análisis , Microplásticos/análisis , Eliminación de Residuos Líquidos , Plásticos/análisis
14.
Environ Sci Technol ; 58(32): 14460-14474, 2024 Aug 13.
Artículo en Inglés | MEDLINE | ID: mdl-39083437

RESUMEN

Numerous penguins can propagate pathogens with antibiotic resistance genes (ARGs) into Antarctica. However, the effects of penguin dissemination on the lake ARGs still have received little attention via guano deposition. Here, we have profiled ARGs in ornithogenic sediments subject to penguin guano (OLS) and nonornithogenic sediments (NOLS) from 16 lakes across Antarctica. A total of 191 ARGs were detected in all sediment samples, with a much higher abundance and diversity in OLS than in NOLS. Surprisingly, highly diverse and abundant ARGs were found in the OLS with a detection frequency of >40% and an absolute abundance of (2.34 × 109)-(4.98 × 109) copies g-1, comparable to those in coastal estuarine sediments and pig farms. The strong correlations of identified resistance genes with penguin guano input amount, environmental factors, mobile genetic elements, and bacterial community, in conjunction with network and redundancy analyses, all indicated that penguins were responsible for the dissemination and high enrichment of ARGs in lake sediments via the guano deposition, which might greatly outweigh local human-activity effects. Our results revealed that ARGs could be carried into lakes across the Antarctica through penguin migration, food chains, and guano deposition, which were closely connected with the widespread pollution of ARGs at the global scale.


Asunto(s)
Farmacorresistencia Microbiana , Lagos , Spheniscidae , Lagos/microbiología , Animales , Spheniscidae/genética , Regiones Antárticas , Farmacorresistencia Microbiana/genética , Sedimentos Geológicos/microbiología , Genes Bacterianos
15.
Microbiol Resour Announc ; 13(8): e0113023, 2024 Aug 13.
Artículo en Inglés | MEDLINE | ID: mdl-38990023

RESUMEN

Sediments in cryoconite holes and meltwater streams in the McMurdo Dry Valleys, Antarctica, provide both substrates and conditions that support life in an arid polar desert. Here, we report the genomic sequences of eight environmental, bacterial isolates from Canada Glacier cryoconite holes and stream. These isolates span three major phyla.

16.
Environ Microbiome ; 19(1): 52, 2024 Jul 26.
Artículo en Inglés | MEDLINE | ID: mdl-39060935

RESUMEN

BACKGROUND: Isolating the effects of deterministic variables (e.g., physicochemical conditions) on soil microbial communities from those of neutral processes (e.g., dispersal) remains a major challenge in microbial ecology. In this study, we disturbed soil microbial communities of two McMurdo Dry Valleys of Antarctica exhibiting distinct microbial biogeographic patterns, both devoid of aboveground biota and different in macro- and micro-physicochemical conditions. We modified the availability of water, nitrogen, carbon, copper ions, and sodium chloride salts in a laboratory-based experiment and monitored the microbial communities for up to two months. Our aim was to mimic a likely scenario in the near future, in which similar selective pressures will be applied to both valleys. We hypothesized that, given their unique microbial communities, the two valleys would select for different microbial populations when subjected to the same disturbances. RESULTS: The two soil microbial communities, subjected to the same disturbances, did not respond similarly as reflected in both 16S rRNA genes and transcripts. Turnover of the two microbial communities showed a contrasting response to the same environmental disturbances and revealed different potentials for adaptation to change. These results suggest that the heterogeneity between these microbial communities, reflected in their strong biogeographic patterns, was maintained even when subjected to the same selective pressure and that the 'rare biosphere', at least in these samples, were deeply divergent and did not act as a reservoir for microbiota that enabled convergent responses to change in environmental conditions. CONCLUSIONS: Our findings strongly support the occurrence of endemic microbial communities that show a structural resilience to environmental disturbances, spanning a wide range of physicochemical conditions. In the highly arid and nutrient-limited environment of the Dry Valleys, these results provide direct evidence of microbial biogeographic patterns that can shape the communities' response in the face of future environmental changes.

17.
Ann Bot ; 2024 Jul 10.
Artículo en Inglés | MEDLINE | ID: mdl-38982647

RESUMEN

BACKGROUND AND AIMS: The complexity of fossil forest ecosystems is difficult to reconstruct due to the fragmentary nature of the fossil record. However, detailed morpho-anatomical studies of well-preserved individual fossils can provide key information on tree growth and ecology, including in biomes with no modern analog such as the lush forests that developed in the polar regions during past greenhouse climatic episodes. METHODS: We describe an unusual-looking stem from Middle Triassic (ca 240 Ma) deposits of Antarctica with over 100 very narrow growth-rings and conspicuous persistent vascular traces through the wood. Sections of the specimen were prepared using the cellulose acetate peel technique to determine its systematic affinities and analyse its growth. KEY RESULTS: The new fossil shows similarities with the form genus Woodworthia and with conifer stems from the Triassic of Antarctica, and is assigned to the conifers. Vascular traces are interpreted as those of small branches retained on the trunk. Growth-ring analyses reveal one of the slowest growth rates reported in the fossil record, with an average of 0.2 mm/season. While the tree was growing within the Triassic polar circle, sedimentological data and growth-ring information from other fossil trees, including from the same locality, support the presence of favorable conditions in the region. CONCLUSIONS: The specimen is interpreted as a dwarf conifer tree that grew under a generally favorable regional climate but whose growth was suppressed due to stressful local site conditions. This is the first time that a tree with suppressed growth is identified as such in the fossil record, providing new insights on the structure of polar forests under greenhouse climates and, more generally, on the complexity of tree communities in deep time.

19.
Int J Biol Macromol ; 276(Pt 2): 134013, 2024 Sep.
Artículo en Inglés | MEDLINE | ID: mdl-39032883

RESUMEN

Lipase with unique regioselectivity is an attractive biocatalyst for elaborate lipid modification. However, the excavation of novel sn-2 regioselective lipases is difficult due to their scarcity in nature, with Candida antarctica lipase A (CALA) being the pronouncedly reported one. Here, we identified a novel CALA-like lipase from Cordyceps militaris (CACML7) via in silico mining. Through chiral-phase high-performance liquid chromatography, we determined that CACML7 displays sn-2 regioselectivity (>68 %) as does CALA, but exhibits distinctive chain length selectivity and bias against unsaturated fats. Notably, the curvature of the acyl-binding tunnel was expected to contribute to the 2.2-fold higher preference for cis-fatty acid (C18:1, cis-Δ9) over trans-fatty acid (C18:1, trans-Δ9) unlike trans-active CALA. Random pose docking of trioleoylglycerol (TOG) into the active site of a lid-truncated mutant of CACML7 revealed that TOG accepts a tuning fork conformation, of which the precise positioning of the reactive ester group towards the catalytic center was only favorable via sn-2 binding mode. The unique active site morphology, which we refer to as an "acyl-binding tunnel with a narrow entrance," may contribute to the sn-2 regioselectivity of CACML7. Our data provide an attractive model to better understand the mechanism underlying sn-2 regioselectivity.


Asunto(s)
Cordyceps , Ácidos Grasos , Lipasa , Lipasa/química , Lipasa/metabolismo , Lipasa/genética , Cordyceps/enzimología , Cordyceps/química , Cordyceps/metabolismo , Especificidad por Sustrato , Ácidos Grasos/metabolismo , Ácidos Grasos/química , Estereoisomerismo , Simulación del Acoplamiento Molecular , Dominio Catalítico , Proteínas Fúngicas/química , Proteínas Fúngicas/metabolismo , Proteínas Fúngicas/genética
20.
Sci Total Environ ; 946: 174354, 2024 Oct 10.
Artículo en Inglés | MEDLINE | ID: mdl-38955269

RESUMEN

Passive samplers are enabling the scaling of environmental DNA (eDNA) biomonitoring in our oceans, by circumventing the time-consuming process of water filtration. Designing a novel passive sampler that does not require extensive sample handling time and can be connected to ocean-going vessels without impeding normal underway activities has potential to rapidly upscale global biomonitoring efforts onboard the world's oceanic fleet. Here, we demonstrate the utility of an artificial sponge sampler connected to the continuous pump underway seawater system as a means to enable oceanic biomonitoring. We compared the performance of this passive sampling protocol with standard water filtration at six locations during a research voyage from New Zealand to Antarctica in early 2023. Eukaryote metabarcoding of the mitochondrial COI gene revealed no significant difference in phylogenetic α-diversity between sampling methods and both methods delineated a progressive reduction in number of Zero-Radius Operational Taxonomic Units (ZOTUs) with increased latitudes. While both sampling methods revealed comparable trends in geographical community compositions, distinct clusters were identified for passive samplers and water filtration at each location. Additionally, greater variability between replicates was observed for passive samplers, resulting in an increased estimated level of replication needed to recover 90 % of the biodiversity. Furthermore, traditional water filtration failed to detect three phyla observed by passive samplers and extrapolation analysis estimated passive samplers recover a larger number of ZOTUs compared to water filtration for all six locations. Our results demonstrate the potential of this passive eDNA sampler protocol and highlight areas where this emerging technology could be improved, thereby enabling large-scale offshore marine eDNA biomonitoring by leveraging the world's oceanic fleet without interfering with onboard activities.


Asunto(s)
Monitoreo Biológico , ADN Ambiental , Monitoreo del Ambiente , Agua de Mar , Monitoreo del Ambiente/métodos , Monitoreo del Ambiente/instrumentación , Monitoreo Biológico/métodos , ADN Ambiental/análisis , Nueva Zelanda , Biodiversidad , Océanos y Mares
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