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1.
J Microbiol Biol Educ ; 25(2): e0021223, 2024 Aug 29.
Artículo en Inglés | MEDLINE | ID: mdl-38814091

RESUMEN

Winogradsky columns were invented by Sergei Winogradsky in the 1880s and have commonly been used as a microbiology classroom learning tool in K-12 and collegiate education. However, they can be challenging to examine with microscopy. We scaled down Winogradsky columns into nuclear magnetic resonance (NMR) tubes and replaced the natural sediment with a transparent soil substitute toward the goal of observing the microbial growth under a bright-field microscope without column disassembly. Using this "Mini Winnie" approach, students can practice their microscopy skills while observing microbial growth inside the column after only days of incubation on the laboratory windowsill. Overall, we believe that the Mini Winnies provide a simple method for maximizing student engagement while giving them a greater understanding of how microorganisms interact in the environment.

2.
Chemosphere ; 286(Pt 1): 131570, 2022 Jan.
Artículo en Inglés | MEDLINE | ID: mdl-34293559

RESUMEN

The increase in pollution increased the threat level of living organisms in the environment. Municipal Solid Waste is one of the most important wastes which contribute to polluted sites affecting livelihood. They pollute the water stream, marine environment ecology, soil fertility, and agriculture production. This, in turn, reduces the microflora of the marine environment, agricultural soil, and fertility. This could be analyzed by setting up a Winogradsky column using dumpsite soil samples. The current work was designed to study the municipal solid wastes from different dumpsite soil. Soil characterization revealed that the pH of Kodungaiyur and Otteri was 7.3 and 6.4. The bulk density was 0.067 g/cm3 and 0.069 g/cm3. The Porosity resulted to be 0.511 particle/volume and 0.513 particle/volume for Kodungaiyur and Otteri. The Kodungaiyur soil containing contaminants supplied with natural sources showed a 100% germination index, and Otteri soil containing contaminants supplied with natural sources showed a maximum vigour index. The presence of medicinal strips in the collected soil samples led to the study on Acetaminophen degradation. HB1 showed to be 79 ± 0.005% at optimum pH 5 containing 100 mg/L of Acetaminophen at day four among the isolated bacterial strains. Further, the intermediate formation was determined using FTIR and GC-MS. The isolated HB1 bacterial strain was identified as Staphylococcus hominis, which is heterotroph.


Asunto(s)
Contaminantes del Suelo , Suelo , Acetaminofén/toxicidad , Agricultura , Contaminantes del Suelo/análisis , Contaminantes del Suelo/toxicidad , Residuos Sólidos/análisis
3.
Environ Res ; 201: 111646, 2021 10.
Artículo en Inglés | MEDLINE | ID: mdl-34228954

RESUMEN

Plastic pollution is threatening the world and the life in it. Cost-effective and eco-friendly treatment is the need of the hour. Treating plastics using chemical methods adds up chemicals into the environment with toxic byproducts. The physical method, a slow and expensive process, is not the better alternative. The process should rely on the environmental sources producing eco-friendly byproducts. The byproducts such as biofuel could be utilized for a sustainable environment, but the conversion of plastics into biofuel is expensive. Hence, biodegradation is the better, sustainable, and cost-effective process for plastic/any other pollutant removal. The study focuses on the construction of Winogradsky column using dumpsite soil. The column amended with Low-Density Polyethylene (LDPE) serves as a carbon source for native microbes. The utilization of microbes in every niche for the degradation enhances the degradation of LDPE. The Otteri soil resulted in 35.4 ± 0.3%, while Kodungaiyur and agriculture soil show 29.7 ± 0.6% and 19.8 ± 0.8%. The AFM analysis shows the disruption of smooth LDPE surface by forming ridges and grooves, which further confirms the occurrence of degradation. The FTIR analysis shows the incorporation of OH, CO, and other CO-O-CO in the CH backbone of LDPE. The oxidation of LDPE will aid in cleavage and result in the process of weathering. The tensile strength decreased after LDPE treatment (23.88 MPa - control, 22.50 MPa - Kodungaiyur, and 14.92 MPa - Otteri). Thus, utilizing the native microbes present in every niche enhances the degradation of pollutants.


Asunto(s)
Biodegradación Ambiental , Polietileno , Bacterias/metabolismo , Consorcios Microbianos
4.
Eur J Protistol ; 80: 125807, 2021 Aug.
Artículo en Inglés | MEDLINE | ID: mdl-34091379

RESUMEN

Winogradsky columns have been widely used to study soil microbial communities, but the vast majority of those investigations have focused on the ecology and diversity of bacteria. In contrast, microbial eukaryotes (ME) have been regularly overlooked in studies based on experimental soil columns. Despite the recognized ecological relevance of ME in soil communities, investigations focused on ME diversity and the abundance of certain groups of interest are still scarce. In the present study, we used DNA metabarcoding (high-throughput sequencing of the V4 region of the 18S rRNA locus) to survey the ME diversity and abundance in an experimental Winogradsky soil column. Consistent with previous surveys in natural soils, our survey identified members of Cercozoa (Rhizaria; 31.2%), Apicomplexa and Ciliophora (Alveolata; 12.5%) as the predominant ME groups, but at particular depths we also detected the abundant presence of ME lineages that are typically rare in natural environments, such as members of the Vampyrellida (Rhizaria) and Breviatea (Amorphea). Our survey demonstrates that experimental soil columns are an efficient enrichment-culture approach that can enhance investigations about the diversity and ecology of ME in soils.


Asunto(s)
Biodiversidad , Ecología/métodos , Eucariontes/clasificación , Suelo/parasitología , Eucariontes/genética , ARN Ribosómico 18S/genética
5.
J Hazard Mater ; 412: 125336, 2021 06 15.
Artículo en Inglés | MEDLINE | ID: mdl-33951880

RESUMEN

Plastic pollution in the current scenario requires a sustainable and eco-friendly treatment process. Single-use plastics accumulate more than recyclable plastic wastes. Low-Density Polyethylene (LDPE) is one among the plastic family with inert characteristics. The traditional method, such as landfilling, develops pollution resistant micro-organisms. It is involved in the exploitation of the native microbes to the fullest. The soil of the Kodungaiyur, agriculture site, and Otteri dumpyard were used, which resulted in nearly 22.97 ± 2.7115%, 15.91667 ± 2.73775%, and 10.74 ± 0.502925% of LDPE degradation in 30 days without nutrient supplements. The enrichment of the column by organic nutrients increased the degradation of LDPE. The column enrichment was confirmed by the sulfur oxidizing bacteria (SOB) Escherichia coli and Pseudomonas stutzeri, which produced 195 mg/mL of sulfate ions. The FTIR of the LDPE degradation showed the polymer's oxygenation, while the electron microscopic images revealed cracks. In addition, an attempt was made to fit the experimental time-series data into suitable mathematical models to look at prediction and elementary forecasting. Three mathematical models, namely the customized moving averages model (CMAM), simple liinear regression model (SLRM), and a modified linear regression model (MLRM) with a lag, were able to represent the real experimental data complementarily.

6.
Hist Philos Life Sci ; 40(1): 11, 2017 Nov 29.
Artículo en Inglés | MEDLINE | ID: mdl-29188459

RESUMEN

Microbial diversity has become a leitmotiv of contemporary microbiology, as epitomized in the concept of the microbiome, with significant consequences for the classification of microbes. In this paper, I contrast microbiology's current diversity ideal with its influential predecessor in the twentieth century, that of purity, as epitomized in Robert Koch's bacteriological culture methods. Purity and diversity, the two polar opposites with regard to making sense of the microbial world, have been operationalized in microbiological practice by tools such as the "clean" Petri dish versus the "dirty" Winogradsky column, the latter a container that mimics, in the laboratory, the natural environment that teems with diverse microbial life. By tracing the impact of the practices and concepts of purity and diversity on microbial classification through a history of techniques, tools, and manuals, I show the shifts in these concepts over the last century. Juxtaposing the dominant purity ideal with the more restricted, but continuously articulated, diversity ideal in microbial ecology not only provides a fresh perspective on microbial classification that goes beyond its intellectual history, but also contextualizes the present focus on diversity. By covering the period of a century, this paper outlines a revised longue durée historiography that takes its inspiration from artifacts, such as Petri dish and the Winogradsky column, and thereby simple, but influential technologies that often remain invisible. This enables the problem of historical continuity in modern science to be addressed and the accelerationist narratives of its development to be countered.


Asunto(s)
Historiografía , Técnicas Microbiológicas/historia , Microbiología/historia , Historia del Siglo XIX , Historia del Siglo XX
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