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1.
Sci Rep ; 14(1): 21034, 2024 09 09.
Artículo en Inglés | MEDLINE | ID: mdl-39251745

RESUMEN

Global sewage sludge production is rapidly increasing, and its safe disposal is becoming an increasingly serious issue. One of the main methods of municipal sewage sludge management is based on its agricultural use. The wastewater and sewage sludge contain numerous antibiotic resistance genes (ARGs), and its microbiome differs significantly from the soil microbial community. The aim of the study was to assess the changes occurring in the soil microbial community and resistome after the addition of sewage sludge from municipal wastewater treatment plant (WWTP) in central Poland, from which the sludge is used for fertilizing agricultural soils on a regular basis. This study used a high-throughput shotgun metagenomics approach to compare the microbial communities and ARGs present in two soils fertilized with sewage sludge. The two soils represented different land uses and different physicochemical and granulometric properties. Both soils were characterized by a similar taxonomic composition of the bacterial community, despite dissimilarities between soils properties. Five phyla predominated, viz. Planctomycetes, Actinobacteria, Proteobacteria, Chloroflexi and Firmicutes, and they were present in comparable proportions in both soils. Network analysis revealed that the application of sewage sludge resulted in substantial qualitative and quantitative changes in bacterial taxonomic profile, with most abundant phyla being considerably depleted and replaced by Proteobacteria and Spirochaetes. In addition, the ratio of oligotrophic to copiotrophic bacteria substantially decreased in both amended soils. Furthermore, fertilized soils demonstrated greater diversity and richness of ARGs compared to control soils. The increased abundance concerned mainly genes of resistance to antibiotics most commonly used in human and animal medicine. The level of heavy metals in sewage sludge was low and did not exceed the standards permitted in Poland for sludge used in agriculture, and their level in fertilized soils was still inconsiderable.


Asunto(s)
Agricultura , Fertilizantes , Microbiota , Aguas del Alcantarillado , Microbiología del Suelo , Suelo , Aguas del Alcantarillado/microbiología , Agricultura/métodos , Suelo/química , Microbiota/genética , Microbiota/efectos de los fármacos , Bacterias/genética , Bacterias/efectos de los fármacos , Bacterias/clasificación , Metagenómica/métodos , Farmacorresistencia Microbiana/genética , Polonia
2.
Sci Total Environ ; 923: 171444, 2024 May 01.
Artículo en Inglés | MEDLINE | ID: mdl-38438036

RESUMEN

Sewage sludge (SS) is rich in plant nutrients, including P, N, and organic C, but often contains toxic metals (TMs), which hinders its potential use in agriculture. The efficiency of removal of TMs by washing with ethylenediamine tetraacetate (EDTA), in combination with hydrodynamic cavitation (HC) and the usability of washed sewage sludge as fertilizer were investigated. The environmental risk was assessed. During 8 wash batches an average 35, 68, 47 and 45 % of Pb, Zn, Cd and Cu, respectively, as well as 22 and 5 % Mn and Fe were removed from the SS. The process solutions and EDTA were recycled at a pH gradient of 12.5-2, which was achieved by adding quicklime (CaO) and then acidification by H2SO4, so that no wastewater was produced, only solid waste (ReSoil® method). The quality of the recycled process solutions (they remained unsaturated with salts) and the efficiency of the washing process were maintained across all batches. On average, 46 % of the EDTA was lost during the process and was replenished. The initial leachability of EDTA-mobilized Pb, Zn, Cu, Cr and Fe remaining in the washed SS increased 6-, 17-, 3-, 11- and 11-fold, respectively, but not to hazardous levels except for Zn. After washing, P and K remained in the SS, plant-available P increased 3.3-fold, while total N and C were reduced by 20.28 and 2.44 %, respectively. Washed SS was used as fertilizer in the pot experiment. The yield of Brassica juncea did not improve, the uptake of TMs by the plants and the leaching of TMs from the soil were minimal. Our study highlighted the drawbacks and potential feasibility of the new SS washing method.


Asunto(s)
Metales Pesados , Contaminantes del Suelo , Aguas del Alcantarillado , Metales Pesados/análisis , Ácido Edético , Fertilizantes , Hidrodinámica , Plomo , Suelo , Plantas , Contaminantes del Suelo/análisis
3.
Compr Rev Food Sci Food Saf ; 23(1): e13260, 2024 01.
Artículo en Inglés | MEDLINE | ID: mdl-38284574

RESUMEN

Thermal processing techniques can lead to the formation of heat-induced toxic substances. Acrylamide is one contaminant that has received much scientific attention in recent years, and it is formed essentially during the Maillard reaction when foods rich in carbohydrates, particularly reducing sugars (glucose, fructose), and certain free amino acids, especially asparagine (ASN), are processed at high temperatures (>120°C). The highly variable free ASN concentration in raw materials makes it challenging for food businesses to keep acrylamide content below the European Commission benchmark levels, while avoiding flavor, color, and texture impacts on their products. Free ASN concentrations in crops are affected by environment, genotype, and soil fertilization, which can also influence protein content and amino acid composition. This review aims to provide an overview of free ASN and acrylamide quantification methods and mitigation strategies for acrylamide formation in foods, focusing on adding pulse flours to cereal-based snacks and bakery products. Overall, this review emphasizes the importance of these mitigation strategies in minimizing acrylamide formation in plant-based products and ensuring safer and healthier food options.


Asunto(s)
Asparagina , Grano Comestible , Asparagina/análisis , Asparagina/química , Asparagina/metabolismo , Grano Comestible/química , Acrilamida/análisis , Acrilamida/química , Acrilamida/toxicidad , Bocadillos , Carbohidratos/análisis , Carbohidratos/química , Aminoácidos/análisis
4.
Ying Yong Sheng Tai Xue Bao ; 34(6): 1703-1712, 2023 Jun.
Artículo en Inglés | MEDLINE | ID: mdl-37694433

RESUMEN

In recent years, the influx of business capital to rural areas, land transfer and adjustment in planting structure have led to the widespread of "non-grain production" of cultivated land in China, which threatens the "1.8 billion mu of arable land protection red line" as well as national food security. Both tillage layer stripped and unstripped are examples of "non-grain production" of cultivated land, which are detrimental to long-term food security because they might reduce soil fertility to varied degrees. In the former case, the original topsoil has been destroyed and the tillage layer is gone. In the latter, there may be impediments such as acidification and salinization. Domestic and international scholars have conducted extensive research on the improvement of degraded soils, including measures with guest soil and soil replacement, the reduction of soil barrier factors, biological fertilization and other measures. There are no systematic research results on the remediation of "non-grain production" of cultivated land. Using data from the National Statistical Yearbook data and literature analysis, we systematically summarized current status of "non-grain production" of cultivated land and key technologies for land improvement, recultivation and fertilization in China, and put forward future directions in this area.


Asunto(s)
Grano Comestible , Suelo , China , Tecnología , Fertilización
5.
Plants (Basel) ; 12(15)2023 Jul 31.
Artículo en Inglés | MEDLINE | ID: mdl-37570990

RESUMEN

The aim of the study was to investigate how essential oil production and associated chemical composition and related biological activity could be influenced by different cultivation treatments and distillation methods. Foeniculum vulgare Mill. (fennel), Origanum vulgare L. (oregano) and Thymus vulgaris L. (thyme) were cultivated in absence of any fertilizer (control) and in presence of three different fertilizers: a chemical one with augmented mineral phosphorus and potassium, a second added with hydrolyzed organic substance and mineral phosphorus and potassium (organic-mineral) and a third one treated with a high content of organic nitrogen of protein origin (organic). The plants were subjected to steam distillation using two modalities, recycled and continuous, to obtain 32 essential oil samples. Chemical composition analysis was performed using gas chromatography-mass spectrometry; in vitro antimicrobial activity was evaluated using a broth microdilution method. In general, the recycled distillation method appeared to have a slightly higher yield than the continuous method. The "mineral" and "organic-mineral" treatments resulted in a higher yield compared to the "organic" or "control" treatments, and this was particularly evident in the recycled method. The "control" plants had a lower yield of essential oils. Anethole (13.9-59.5%) and estragole (13.4-52.2%) were the main constituents of the fennel oils; p-cymene and its derivatives carvacrol and thymol were the main constituents of the oregano and thyme samples. The antimicrobial activity of the thyme oils on Staphylococcus aureus ranged from 0.31 to 0.16% (v/v); a lower effect of the oregano samples and no activity of the fennel samples were observed. The essential oils failed to inhibit the growth of Pseudomonas aeruginosa strains.

6.
Chemosphere ; 337: 139261, 2023 Oct.
Artículo en Inglés | MEDLINE | ID: mdl-37379984

RESUMEN

Using bio-based fertilizer (BBF) in agricultural soil can reduce the dependency on chemical fertilizer and increase sustainability by recycling nutrient-rich side-streams. However, organic contaminants in BBFs may lead to residues in the treated soil. This study assessed the presence of organic contaminants in BBF treated soils, which is essential for evaluating sustainability/risks of BBF use. Soil samples from two field studies amended with 15 BBFs from various sources (agricultural, poultry, veterinary, and sludge) were analyzed. A combination of QuEChERS-based extraction, liquid chromatography quadrupole time of flight mass spectrometry-based (LC-QTOF-MS) quantitative analysis, and an advanced, automated data interpretation workflow was optimized to extract and analyze organic contaminants in BBF-treated agricultural soil. The comprehensive screening of organic contaminants was performed using target analysis and suspect screening. Of the 35 target contaminants, only three contaminants were detected in the BBF-treated soil with concentrations ranging from 0.4 ng g-1 to 28.7 ng g-1; out of these three detected contaminants, two were also present in the control soil sample. Suspect screening using patRoon (an R-based open-source software platform) workflows and the NORMAN Priority List resulted in tentative identification of 20 compounds (at level 2 and level 3 confidence level), primarily pharmaceuticals and industrial chemicals, with only one overlapping compound in two experimental sites. The contamination profiles of the soil treated with BBFs sourced from veterinary and sludge were similar, with common pharmaceutical features identified. The suspect screening results suggest that the contaminants found in BBF-treated soil might come from alternative sources other than BBFs.


Asunto(s)
Fertilizantes , Aguas del Alcantarillado , Fertilizantes/análisis , Aguas del Alcantarillado/análisis , Suelo , Cromatografía Liquida/métodos , Espectrometría de Masas/métodos
7.
Rev Environ Sci Biotechnol ; 22(2): 505-526, 2023.
Artículo en Inglés | MEDLINE | ID: mdl-37234132

RESUMEN

Worldwide, 40% population consumes wheat (Triticum aestivum L.) as a staple food that is low in zinc (Zn) content. Zn deficiency is a major micronutrient disorder in crop plants and humans worldwide, adversely impacting agricultural productivity, human health and socio-economic concern. Globally, the entire cycle of increasing the Zn concentration in wheat grains and its ultimate effect on grain yield, quality, human health & nutrition and socio-economic status of livelihood is less compared. So the present studies were planned to compare the worldwide studies for the alleviation of Zn malnutrition. Zn intake is affected by numerous factors from soil to crop, crop to food and food to humans. The post-harvest fortification, diversification in dietary habits, mineral supplementation and biofortification are various possible approaches to enhance the Zn concentration in food. The wheat grains Zn is influenced by the Zn application technique and time concerning crop developmental stages. The use of soil microorganisms mobilize unavailable Zn, and improve Zn assimilation, plant growth, yield and Zn content in wheat. Climate change can have an inverse impact on the efficiency of agronomic biofortification methods due to a reduction in grain-filling stages. Agronomic biofortification can improve Zn content, crop yield as well as quality and ultimately, have a positive impact on human nutrition, health and socioeconomic status of livelihood. Though bio-fortification research has progressed, some crucial areas are still needed to be addressed or improved to achieve the fundamental purpose of agronomic biofortification.

8.
Insects ; 13(8)2022 Aug 09.
Artículo en Inglés | MEDLINE | ID: mdl-36005342

RESUMEN

Nectar is a complex biochemical substance secreted with particular rhythm by flower nectaries. Nectar is the base of a mutualism in which pollinators consume nectar, as food source, and are involuntarily responsible for the transport of pollen and pollination. The dynamics and temporal patterns of nectar secretion are still not fully understood as well as the environmental and climatic factors influencing its production. The quantity and quality of nectar found in standing crops at flowering influence the mutualistic relationship with pollinators and their foraging behavior. This situation is even more significant considering the reduction in undisturbed environments, the loss of soil quality, the spread of monoculture agricultural management and the use of self-fertile hybrids. The objects of the study are understanding the relationship among soil properties and nectar quality, comparing the nectar composition in a sunflower hybrid variety and evaluate pollinator preferences in selecting nectar sources among hybrid and non-hybrid varieties. For these purposes, two different experimental tests were established. Results highlighted that fertilization strategy influenced crop biomass development, determined soil characteristics and nectar composition in Sunflower. However, when comparing nectar composition of hybrid and non-hybrid varieties of sunflower, no significant differences were found. Despite this, the analysis of number of visits on the two treatments showed statistically significant differences. This research provides further understanding of the very complex relationship among soil, crop and nectar to support the definition of agricultural management strategies and reach the optimal nectar composition level for pollinators in agricultural crops.

9.
Plant Biol (Stuttg) ; 24(6): 1022-1030, 2022 Oct.
Artículo en Inglés | MEDLINE | ID: mdl-35924404

RESUMEN

Gynodioecy is assumed to be an evolutionary transition from hermaphroditism to dioecy. However, if hermaphrodites can better flexibly regulate seed production depending on resource availability than females, i.e. sex-differential plasticity (SDP), gynodioecy can be a stable state. In the gynodioecious shrub Daphne jezoensis, hermaphrodites generally exhibit low seed fertility and largely act as males. We examined the SDP hypothesis and the cost of fruit production to clarify why D. jezoensis did not evolve into unisexual morphs. We evaluated the size and resource dependency of reproduction in field experiments by manipulating soil nutrient and light conditions. We compared the plant size and pollen production among females, fruiting hermaphrodites and non-fruiting hermaphrodites. We then analysed the effect of current fruit production on subsequent flower production, i.e. the cost of fruit production. The fruiting ability was independent of plant size and resource availability in both sexual phenotypes, indicating the absence of SDP in D. jezoensis. Hermaphrodites produced larger-sized pollen and allocated more resources to pollen production in the non-fruiting year than in the fruiting year. In contrast, the cost of fruit production was not revealed for either sexual phenotype, even in the absence of pollen limitation, and even when fruit production was maximized. SDP could not explain the maintenance of hermaphrodites in D. jezoensis. Alternatively, the lower cost of fruit production in hermaphrodites due to their potentially low fruiting ability may hinder the evolutionary shift to dioecy.


Asunto(s)
Daphne , Trastornos del Desarrollo Sexual , Daphne/genética , Fertilidad , Plantas , Reproducción/fisiología , Semillas/fisiología , Suelo
10.
Antonie Van Leeuwenhoek ; 115(1): 69-78, 2022 Jan.
Artículo en Inglés | MEDLINE | ID: mdl-34762236

RESUMEN

The need for sustainability in food supply has led to progressive increase in soil nutrient enrichment. Fertilizer application effects both biological and abiotic processes in the soil, of which the bacterial community that support viral multiplication are equally influenced. Nevertheless, little is known on the effect of soil fertilization on the Soil viral community composition and dynamics. In this study, we evaluated the influence of soil fertilization on the maize rhizosphere viral community growing in Luvisolic soil. The highest abundance of bacteriophages were detected in soil treated with 8 tons/ha compost manure (Cp8), 60 kg/ha inorganic fertilizer (N1), 4 tons/ha compost manure (Cp4) and the unfertilized control (Cn0). Our result showed higher relative abundance of Myoviridae, Podoviridae and Siphoviridae in 8 tons/ha organic manure (Cp8) fertilized compared to others. While Inoviridae and Microviridae were the most relative abundant phage families in 4 tons/ha organic manure (Cp4) fertilized soil. This demonstrate that soil fertilization with organic manure increases the abundance and diversity of viruses in the soil due to its soil conditioning effects.


Asunto(s)
Metagenómica , Zea mays , Fertilización , Humanos , Rizosfera , Suelo , Microbiología del Suelo
11.
Genes (Basel) ; 12(7)2021 06 30.
Artículo en Inglés | MEDLINE | ID: mdl-34209356

RESUMEN

Biogeochemical cycling of phosphorus in the agro-ecosystem is mediated by soil microbes. These microbes regulate the availability of phosphorus in the soil. Little is known about the response of functional traits of phosphorus cycling microbes in soil fertilized with compost manure (derived from domestic waste and plant materials) or inorganic nitrogen fertilizers at high and low doses. We used a metagenomics investigation study to understand the changes in the abundance and distribution of microbial phosphorus cycling genes in agricultural farmlands receiving inorganic fertilizers (120 kg N/ha, 60 kg N/ha) or compost manure (8 tons/ha, 4 tons/ha), and in comparison with the control. Soil fertilization with high level of compost (Cp8) or low level of inorganic nitrogen (N1) fertilizer have nearly similar effects on the rhizosphere of maize plants in promoting the abundance of genes involved in phosphorus cycle. Genes such as ppk involved in polyphosphate formation and pstSABC (for phosphate transportation) are highly enriched in these treatments. These genes facilitate phosphorus immobilization. At a high dose of inorganic fertilizer application or low compost manure treatment, the phosphorus cycling genes were repressed and the abundance decreased. The bacterial families Bacillaceae and Carnobacteriaceae were very abundant in the high inorganic fertilizer (N2) treated soil, while Pseudonocardiaceae, Clostridiaceae, Cytophagaceae, Micromonosporaceae, Thermomonosporaceae, Nocardiopsaceae, Sphaerobacteraceae, Thermoactinomycetaceae, Planococcaceae, Intrasporangiaceae, Opitutaceae, Acidimicrobiaceae, Frankiaceae were most abundant in Cp8. Pyrenophora, Talaromyces, and Trichophyton fungi were observed to be dominant in Cp8 and Methanosarcina, Methanobrevibacter, Methanoculleus, and Methanosphaera archaea have the highest percentage occurrence in Cp8. Moreover, N2 treatment, Cenarchaeum, Candidatus Nitrososphaera, and Nitrosopumilus were most abundant among fertilized soils. Our findings have brought to light the basis for the manipulation of rhizosphere microbial communities and their genes to improve availability of phosphorus as well as phosphorus cycle regulation in agro-ecosystems.


Asunto(s)
Proteínas Bacterianas/genética , Fertilizantes/análisis , Metagenómica , Fósforo/metabolismo , Rizosfera , Suelo/química , Zea mays/genética , Agricultura , Bacterias/genética , Bacterias/crecimiento & desarrollo , Bacterias/metabolismo , Proteínas Bacterianas/metabolismo , Estiércol/microbiología , Nitrógeno/metabolismo , Fósforo/análisis , Microbiología del Suelo , Zea mays/efectos de los fármacos , Zea mays/crecimiento & desarrollo , Zea mays/microbiología
12.
Chemosphere ; 282: 131122, 2021 Nov.
Artículo en Inglés | MEDLINE | ID: mdl-34119732

RESUMEN

The fertilization using sewage sludge (SS) and/or SS-derived products have been extensively studied and known to increase crop yield as soil nutrients and plant growth are improved. This study aimed to evaluate two SS application methods (i.e. mulching and mixing with the soil) on soil fertility parameters and the productivity of cereal crops. It compared the effect of SS fertilization methods on changes in soil physicochemical parameters in order to highlight the application mode which gives the best agronomic values and sustains soil productivity. Foliar surface, grain starch content and grain yield of durum wheat (Triticum durum) were determined in plants grown in plastic planters for different fertilization treatments (SS-mulched, SS-mixed, urea, and unfertilized). Each SS treatment was applied in three levels (SS1 = 1% w/w ratio, SS2 = 4%, SS3 = 8.3%). The application of SS improved all soil properties compared to the control and urea, with the SS mulching treatment was the best. The significant improvement of soil fertility was confirmed by soil C:P ratio which indicated a good soil mineralization status, in particular under the screen formed by mulching that helped to conserve high soil moisture for optimizing plant growth. Soil calcium accumulated in greater amount in biosolid-soil mixtures than in SS-mulched soils. Regardless of SS doses, the highest crop grain yields were obtained with the SS mulch treatments. Mulching SS, compared to SS-mixed soils, brings better results in terms of improving soil fertility and yielding high productions. The applicable of this method is also easy in the field and/or large-scale cultures.


Asunto(s)
Contaminantes del Suelo , Suelo , Agricultura , Biosólidos , Fertilizantes/análisis , Aguas del Alcantarillado , Contaminantes del Suelo/análisis , Triticum
13.
Chemosphere ; 280: 130582, 2021 Oct.
Artículo en Inglés | MEDLINE | ID: mdl-33962292

RESUMEN

Amendment of soil with organic urban and animal wastes can keep arable soil fertile without the need for synthetic fertilizers. However, pollutants present in these types of waste might be carried into the soil with unintended consequences for the environment. We studied an experimental agricultural plot, which had been amended with either synthetic inorganic fertilizers, human urine, manure, or wastewater treatment sludge at very high rates. We applied chemical non-target analysis to characterize present organic micropollutants, intending to compare treatments and highlight suspects of environmental concern. Soil samples were prepared by pressurized liquid and purified with solid-phase extraction before analysis with nanoflow ultra-high performance liquid chromatography coupled to high-resolution Orbitrap tandem mass spectrometry. Automated elucidation with two mass spectral libraries, multiple large chemical databases and environmental NORMAN suspect lists was able to annotate (level 3 and level 2) âˆ¼ 20% of the 2306 detected features. A following principal component- and differential-analysis could separate the soil treatment groups' pollution profiles and highlight high relative abundance features. From cattle manure, natural compounds such as bile acids and steroids were found. Human urine led to pollution with common pharmaceuticals such as metoprolol and propranolol. The highest number was added by wastewater treatment sludge, with 25 significant contaminants, spanning blood pressure regulators, antidepressants, synthetic steroids and sleep medication. Furthermore, using Kendrick mass defect plots, a series of polypropylene glycols could be revealed in the soil. Non-target analysis appears to be a promising method to characterize organic pollutants in soils.


Asunto(s)
Contaminantes del Suelo , Suelo , Agricultura , Animales , Bovinos , Monitoreo del Ambiente , Fertilizantes/análisis , Cromatografía de Gases y Espectrometría de Masas , Estiércol/análisis , Aguas del Alcantarillado , Contaminantes del Suelo/análisis
14.
Genes (Basel) ; 12(4)2021 04 07.
Artículo en Inglés | MEDLINE | ID: mdl-33917127

RESUMEN

Soil fertility is a function of the level of organic and inorganic substances present in the soil, and it influences the activities of soil-borne microbes, plant growth performance and a host of other beneficial ecological functions. In this metagenomics study, we evaluated the response of maize microbial functional gene diversity involved in chemotaxis, antibiotics, siderophores, and antifungals producing genes within the rhizosphere of maize plants under compost, inorganic fertilizer, and unfertilized conditions. The results show that fertilization treatments at higher compost manure and lower inorganic fertilizer doses as well as maize plants itself in the unfertilized soil through rhizosphere effects share similar influences on the abundance of chemotaxis, siderophores, antifungal, and antibiotics synthesizing genes present in the samples, while higher doses of inorganic fertilizer and lower compost manure treatments significantly repress these genes. The implication is for a disease suppressive soil to be achieved, soil fertilization with high doses of compost manure fertilizer treatments as well as lower inorganic fertilizer should be used to enrich soil fertility and boost the abundance of chemotaxis and disease suppressive genes. Maize crops also should be planted sole or intercropped with other crops to enhance the rhizosphere effect of these plants in promoting the expression and abundance of these beneficial genes in the soil.


Asunto(s)
Quimiotaxis , Fertilizantes/análisis , Metagenómica , Enfermedades de las Plantas/genética , Microbiología del Suelo , Suelo/química , Zea mays/genética , Estiércol/microbiología , Enfermedades de las Plantas/microbiología , Rizosfera , Zea mays/efectos de los fármacos , Zea mays/crecimiento & desarrollo , Zea mays/microbiología
15.
AMB Express ; 11(1): 24, 2021 Feb 08.
Artículo en Inglés | MEDLINE | ID: mdl-33555438

RESUMEN

Soil microbes perform important functions in nitrogen and carbon cycling in the biosphere. Microbial communities in the rhizosphere enhance plants' health and promote nutrient turnover and cycling in the soil. In this study, we evaluated the effects of soil fertilization with organic and inorganic fertilizers on the abundances and distribution of carbon and nitrogen cycling genes within the rhizosphere of maize plants. Our result showed that maize plants through rhizosphere effects selected and enriched the same functional genes glnA, gltB, gudB involved in nitrogen cycle as do high compost and low inorganic fertilizer treatments. This observation was significantly different from those of high doses of inorganic fertilizer and low compost manure treated soil. Only alpha amylase encoding genes were selectively enriched by low compost and high inorganic fertilized soil. The other treatments only selected xynB (in Cp8), lacZ (Cp4), bglA, pldB, trpA (N2), uidA (N1) and glgC, vanA (Cn0) carbon cycling genes in the rhizosphere of maize. Also Actinomycetales are selected by high compost, low inorganic fertilizer and control. The control was without any fertilization and the soil was planted with maize. Bacillales are also promoted by low compost and high inorganic fertilizer. This indicated that only microbes capable of tolerating the stress of high dose of inorganic fertilizer will thrive under such condition. Therefore, soil fertilization lowers nitrogen gas emission as seen with the high abundance of nitrogen assimilation genes or microbial anabolic genes, but increases carbon dioxide evolution in the agricultural soil by promoting the abundance of catabolic genes involve in carbon cycling.

16.
FEMS Microbiol Ecol ; 96(12)2020 11 25.
Artículo en Inglés | MEDLINE | ID: mdl-33150935

RESUMEN

The natural microbial functions of many soils are severely degraded. Current state-of-the-art technology to restore these functions is through the isolation, screening, formulation and application of microbial inoculants and synthetic consortia. These approaches have inconsistent success, in part due to the incompatibility between the biofertilizer, crop, climate, existing soil microbiome and physicochemical characteristics of the soils. Here, we review the current state of the art in biofertilization and identify two key deficiencies in current strategies: the difficulty in designing complex multispecies biofertilizers and the bottleneck in scaling the production of complex multispecies biofertilizers. To address the challenge of producing scalable, multispecies biofertilizers, we propose to merge ecological theory with bioprocess engineering to produce 'self-assembled communities' enriched for particular functional guilds and adapted to a target soil and host plant. Using the nitrogen problem as an anchor, we review relevant ecology (microbial, plant and environmental), as well as reactor design strategies and operational parameters for the production of functionally enriched self-assembled communities. The use of self-assembled communities for biofertilization addresses two major hurdles in microbiome engineering: the importance of enriching microbes indigenous to (and targeted for) a specific environment and the recognized potential benefits of microbial consortia over isolates (e.g. functional redundancy). The proposed community enrichment model could also be instrumental for other microbial functions such as phosphorus solubilization, plant growth promotion or disease suppression.


Asunto(s)
Microbiota , Microbiología del Suelo , Bacterias/genética , Consorcios Microbianos , Suelo
17.
Vet Sci ; 7(3)2020 Aug 13.
Artículo en Inglés | MEDLINE | ID: mdl-32823495

RESUMEN

The increasing demand for animal-derived foods has led to intensive and large-scale livestock production with the consequent formation of large amounts of manure. Livestock manure is widely used in agricultural practices as soil fertilizer worldwide. However, several antibiotic residues, antibiotic resistance genes (ARGs) and antibiotic-resistant bacteria are frequently detected in manure and manure-amended soils. This review explores the role of manure in the persistence and dissemination of ARGs in the environment, analyzes the procedures used to decrease antimicrobial resistance in manure and the potential impact of manure application in public health. We highlight that manure shows unique features as a hotspot for antimicrobial gene dissemination by horizontal transfer events: richness in nutrients, a high abundance and diversity of bacteria populations and antibiotic residues that may exert a selective pressure on bacteria and trigger gene mobilization; reduction methodologies are able to reduce the concentrations of some, but not all, antimicrobials and microorganisms. Conjugation events are often seen in the manure environment, even after composting. Antibiotic resistance is considered a growing threat to human, animal and environmental health. Therefore, it is crucial to reduce the amount of antimicrobials and the load of antimicrobial resistant bacteria that end up in soil.

18.
Waste Manag ; 108: 144-153, 2020 May 01.
Artículo en Inglés | MEDLINE | ID: mdl-32353779

RESUMEN

This study evaluated the physicochemical and morphological properties of pectin and chitosan particles combined with sugarcane vinasse for soil fertilization applications. Particles were obtained by adding the biopolymeric solutions (pectin or chitosan solution) dropwise into the crosslinking solutions (calcium chloride 1% in ethanolic solution or tripolyphosphate 5% aqueous solution) followed by drying. Vinasse enhanced pectin gel stability improving pectin/vinasse particle properties. Physicochemical characterization indicated that vinasse nutrients were properly incorporated in both pectin and chitosan matrices. Particles showed spherical shape, with an average diameter of 3 and 2 mm for the pectin and chitosan particles with vinasse, respectively. Chitosan particles, compared to pectin, showed lower swelling capacity and solubility and higher mechanical resistance indicating a denser and more compact polymer network. Both particles were able to hinder water evaporation rates from sandy soil under water stress conditions. Biobased particles with vinasse added show potential to be applied as soil fertilizer representing an alternative to use and disposal of this expressive wastewater from sugar and alcohol industries.


Asunto(s)
Saccharum , Contaminantes del Suelo , Biopolímeros , Fertilizantes , Suelo
19.
Appl Environ Microbiol ; 86(10)2020 05 05.
Artículo en Inglés | MEDLINE | ID: mdl-32144110

RESUMEN

This study investigated the effects of long-term soil fertilization on the composition and potential for phosphorus (P) and nitrogen (N) cycling of bacterial communities associated with hyphae of the P-solubilizing fungus Penicillium canescens Using a baiting approach, hyphosphere bacterial communities were recovered from three soils that had received long-term amendment in the field with mineral or mineral plus organic fertilizers. P. canescens hyphae recruited bacterial communities with a decreased diversity and an increased abundance of Proteobacteria relative to what was observed in soil communities. As core bacterial taxa, Delftia and Pseudomonas spp. were present in all hyphosphere samples irrespective of soil fertilization. However, the type of fertilization showed significant impacts on the diversity, composition, and distinctive taxa/operational taxonomic units (OTUs) of hyphosphere communities. The soil factors P (Olsen method), exchangeable Mg, exchangeable K, and pH were important for shaping soil and hyphosphere bacterial community compositions. An increased relative abundance of organic P metabolism genes was found in hyphosphere communities from soil that had not received P fertilizers, which could indicate P limitation near the fungal hyphae. Additionally, P. canescens hyphae recruited bacterial communities with a higher abundance of N fixation genes than found in soil communities, which might imply a role of hyphosphere communities for fungal N nutrition. Furthermore, the relative abundances of denitrification genes were greater in several hyphosphere communities, indicating an at least partly anoxic microenvironment with a high carbon-to-N ratio around the hyphae. In conclusion, soil fertilization legacy shapes P. canescens hyphosphere microbiomes and their functional potential related to P and N cycling.IMPORTANCE P-solubilizing Penicillium strains are introduced as biofertilizers to agricultural soils to improve plant P nutrition. Currently, little is known about the ecology of these biofertilizers, including their interactions with other soil microorganisms. This study shows that communities dominated by Betaproteobacteria and Gammaproteobacteria colonize P. canescens hyphae in soil and that the compositions of these communities depend on the soil conditions. The potential of these communities for N and organic P cycling is generally higher than that of soil communities. The high potential for organic P metabolism might complement the ability of the fungus to solubilize inorganic P, and it points to the hyphosphere as a hot spot for P metabolism. Furthermore, the high potential for N fixation could indicate that P. canescens recruits bacteria that are able to improve its N nutrition. Hence, this community study identifies functional groups relevant for the future optimization of next-generation biofertilizer consortia for applications in soil.


Asunto(s)
Bacterias/metabolismo , Ciclo del Nitrógeno , Penicillium/metabolismo , Fósforo/metabolismo , Microbiología del Suelo , Suelo/química , Bacterias/clasificación , Fertilizantes , Hifa/metabolismo , Microbiota
20.
Sci Total Environ ; 716: 137008, 2020 May 10.
Artículo en Inglés | MEDLINE | ID: mdl-32059294

RESUMEN

Ozone (O3) in the troposphere, an air pollutant with phytotoxicity, is considered as a driver of global warming, because it reduces plant carbon fixation. Recently, a process-based plant growth model has been used in evaluating the O3 impacts on plants (Schauberger et al., 2019). To make the evaluation more rigorous, we developed a plant growth model and clarified the key factors driving O3-induced change in the whole-plant carbon fixation amount (Cfix). Fagus crenata seedlings were exposed to three O3 levels (charcoal-filtered air or 1.0- or 1.5-folds ambient [O3]) with three soil fertilization levels (non-, low-, or high-fertilized), i.e., a total of nine treatments. The Cfix was reduced in non- and low-fertilized treatments but was unaffected in high-fertilized treatment by O3 fumigation. Our plant growth model could simulate Cfix accurately (<10% error) by considering the impacts of O3 on plant leaf area and photosynthetic capacities, including maximum velocities of carboxylation and electron transport (Vcmax and Jmax, respectively), and the initial slope and convexity of the curve of the electron transport velocity response to photosynthetic photon flux density (φ and θ, respectively). Furthermore, the model revealed that changes in Vcmax and Jmax, φ and θ, or leaf area, caused by 1.5-folds the ambient [O3] fumigation resulted in the following Cfix changes: -1.6, -5.8, or -16.4% in non-fertilized seedlings, -4.1, -4.4, or -9.3% in low-fertilized seedlings, and -4.6, -7.6, or +5.8% in high-fertilized seedlings. Therefore, photosynthetic capacities (particularly φ and θ) and leaf area are important factors influencing the impact of O3 on Cfix of F. crenata seedlings grown under various fertilization levels. Further, the impacts of O3 and soil nutrient on these photosynthetic capacities and plant leaf area should be considered to predict O3-induced changes in carbon fixation by forest tree species using the process-based plant growth model.


Asunto(s)
Ciclo del Carbono , Fagus , Nutrientes , Ozono , Fotosíntesis , Hojas de la Planta , Suelo
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