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1.
Pestic Biochem Physiol ; 194: 105463, 2023 Aug.
Artículo en Inglés | MEDLINE | ID: mdl-37532308

RESUMEN

Plant glutathione S-transferase (GST, EC 2.5.1.18) is an enzyme that detoxifies various electrophilic compounds including herbicides and organic pollutants by catalyzing the formation of conjugates with reduced glutathione (GSH). Although the structure and function of the GST subunits in rice, an important food in Asia, are not well understood, they are crucial for herbicide development. To investigate the role of active site residues in rice Phi-class GSTF3 (OsGSTF3), evolutionarily conserved serine residues were replaced with alanine using site-directed mutagenesis to obtain the mutants S13A, S38A, S69A, and S169A. These four mutants were expressed in Escherichia coli and purified to electrophoretic homogeneity using immobilized GSH affinity chromatography. Mutation of Ser13 to Ala resulted in substantial reductions in specific activities and kcat/Km values for the GSH-[1-chloro-2,4-dinitrobenzene (CDNB)] conjugation reaction. In contrast, mutations of Ser38, Ser69, and Ser169 to Ala had little effect on the activities and kinetic parameters. Additionally, the mutation of Ser13 to Ala significantly affected the KmGSH and I50 values of S-hexylglutathione and S-(2,4-dinitrophenyl)glutathione, which compete with GSH and the product of GSH-CDNB conjugation, respectively. A pH-log (kcat/KmCDNB) plot was used to estimate the pKa value of GSH in the enzyme-GSH complex of the wild-type enzyme, which was approximately 6.9. However, the pKa value of GSH in the enzyme-GSH complex of the S13A mutant was approximately 8.7, which was about 1.8 pK units higher than that of the wild-type enzyme. OsGSTF3 was also crystallized for crystallographic study, and the structure analyses revealed that Ser13 is located in the active site and that its side chain is in close proximity to the thiol group of glutathione bound in the enzyme. Based on these substitution effects on kinetic parameters, the dependence of kinetic parameters on the pH and 3-dimensional structure, it was suggested that Ser13 in rice OsGSTF3 is the residue responsible for catalytic activity by lowering the pKa of GSH in the enzyme-GSH complex and enhancing the nucleophilicity of the GSH thiol in the active site.


Asunto(s)
Oryza , Dominio Catalítico , Oryza/genética , Oryza/metabolismo , Glutatión Transferasa/genética , Glutatión Transferasa/metabolismo , Serina , Compuestos de Sulfhidrilo/metabolismo , Cinética , Glutatión/metabolismo , Sitios de Unión
2.
Methods Mol Biol ; 2519: 17-26, 2023.
Artículo en Inglés | MEDLINE | ID: mdl-36066706

RESUMEN

Cellular division is a fundamental process of cellular growth. First, cells replicate their DNA in S phase and then undergo mitosis which, under normal conditions, leads to complete cell division. Moreover, mitotic activity correlates to cellular growth activity. The simplest and classical method to measure mitotic activity (mitotic index (MI)), is the manual counting of mitotic cells among a given cell population of interest. The latter can be accomplished via phase contrast microscope observation. However, Giemsa staining may improve accuracy and consistency. Fluorescence immunostaining targeting specific phosphorylations of proteins at critical cell cycle steps will provide further improved analysis via high-throughput capacity of flow or imaging cytometer. Finally, time lapse image analysis provides quantitative and qualitative metrics delineating the process of cellular division including timing of division, duration of mitosis, and failure to procced through or complete mitosis.


Asunto(s)
Mitosis , Ciclo Celular , Índice Mitótico , Fosforilación , Fase S
3.
Materials (Basel) ; 15(13)2022 Jun 22.
Artículo en Inglés | MEDLINE | ID: mdl-35806524

RESUMEN

Silk fibroin (SF) is a natural protein polymer and promising biomaterial. Chemical modifications have attracted growing interest in expanding SF applications. However, the majority of amino acid residues in SF are non-reactive and most of the reactive ones are in the crystalline region. Herein, a modification was conducted to investigate the possibility of direct modification on the surface of natural SF by a reagent with a mild reactivity, the type and quantity of the residues involved in the reactions, and the structural changes upon modification. Infrared spectrum, 1H NMR, titration and amino acid analyses, X-ray diffraction, and hemolysis test were used to analyze the materials. The results showed that sulfonic acid groups were grafted onto SF and the reaction occurred mainly at serine residues through hydroxyl groups. In total, 0.0958 mmol/g of residues participated in the modification with a modification efficiency of 7.6%. Moreover, the crystallinity and the content of ß-sheet structure in SF increased upon modification. The modified material had good blood-compatibility. In conclusion, surface modification on native SF through serine residues was practicable and had the advantage of increased ß-sheet structure. This will provide an alternative way for the modification of fibroin for the desired application in the biomedical field.

4.
Protein Pept Lett ; 28(6): 651-664, 2021.
Artículo en Inglés | MEDLINE | ID: mdl-33183186

RESUMEN

BACKGROUND: Fibrinolytic protease from Euphausia superba (EFP) was isolated. OBJECTIVE: Biochemical distinctions, regulation of the catalytic function, and the key residues of EFP were investigated. METHODS: The serial inhibition kinetic evaluations coupled with measurements of fluorescence spectra in the presence of 4-(2-aminoethyl) benzene sulfonyl fluoride hydrochloride (AEBSF) was conducted. The computational molecular dynamics (MD) simulations were also applied for a comparative study. RESULTS: The enzyme behaved as a monomeric protein with a molecular mass of about 28.6 kD with Km BApNA = 0.629 ± 0.02 mM and kcat/Km BApNA = 7.08 s-1/mM. The real-time interval measurements revealed that the inactivation was a first-order reaction, with the kinetic processes shifting from a monophase to a biphase. Measurements of fluorescence spectra showed that serine residue modification by AEBSF directly caused conspicuous changes of the tertiary structures and exposed hydrophobic surfaces. Some osmolytes were applied to find protective roles. These results confirmed that the active region of EFP is more flexible than the overall enzyme molecule and serine, as the key residue, is associated with the regional unfolding of EFP in addition to its catalytic role. The MD simulations were supportive to the kinetics data. CONCLUSION: Our study indicated that EFP has an essential serine residue for its catalyst function and associated folding behaviors. Also, the functional role of osmolytes such as proline and glycine that may play a role in defense mechanisms from environmental adaptation in a krill's body was suggested.


Asunto(s)
Proteínas de Artrópodos , Euphausiacea/enzimología , Serina Proteasas , Animales , Proteínas de Artrópodos/química , Proteínas de Artrópodos/aislamiento & purificación , Proteínas de Artrópodos/metabolismo , Fibrinólisis , Cinética , Simulación de Dinámica Molecular , Pliegue de Proteína , Serina Proteasas/química , Serina Proteasas/aislamiento & purificación , Serina Proteasas/metabolismo
5.
Biochem Biophys Res Commun ; 443(1): 62-7, 2014 Jan 03.
Artículo en Inglés | MEDLINE | ID: mdl-24269809

RESUMEN

Ubiquitin E3 ligases including SCF complex are key regulators of cell cycle. Here, we show that Mis18ß, a component of Mis18 complex governing CENP-A localization, is a new substrate of ßTrCP-containing SCF complex. ßTrCP interacted with Mis18ß exclusively during interphase but not during mitosis and mediated proteasomal degradation of Mis18ß leading to the inactivation of Mis18 complex during interphase. In addition, uncontrolled stabilization of Mis18ß caused cell death. Together, we propose that ßTrCP-mediated regulation of Mis18ß stability is a mechanism to restrict centromere function of Mis18 complex from late mitosis to early G1 phase.


Asunto(s)
Ciclo Celular , Proteínas Cromosómicas no Histona/metabolismo , Proteínas Ligasas SKP Cullina F-box/metabolismo , Ubiquitinación , Proteínas con Repetición de beta-Transducina/metabolismo , Secuencias de Aminoácidos , Proteínas de Ciclo Celular , Centrómero/metabolismo , Proteínas Cromosómicas no Histona/química , Proteínas Cromosómicas no Histona/genética , Células HeLa , Humanos , Estabilidad Proteica , Interferencia de ARN , ARN Interferente Pequeño/genética
6.
Auton Neurosci ; 177(2): 217-23, 2013 Oct.
Artículo en Inglés | MEDLINE | ID: mdl-23721955

RESUMEN

The principal aim of this study was to determine whether prolonged chronic footshock stress can evoke sustained changes in blood pressure in rats and to elucidate possible underlying neurochemical mechanisms as mediated by the sympathoadrenal system. Adult male Wistar rats instrumented for telemetric recording of arterial pressure, heart rate and locomotor activity were subjected to six weeks of inescapable unpredictable electrical footshocks (FS+) or were exposed to shock chambers but were not shocked (FS-). Compared to FS- animals, FS+ animals had significantly reduced body weight gain (by 30%), locomotor activity (by 25%) and social interaction time (by 30%)--symptoms commonly induced by chronic stress and depression in humans. These changes were associated with small, but significant increases in systolic blood pressure (by 7%) and pulse pressure (by 11%) in FS+ rats relative to FS- rats. We have also found neurochemical alterations in sympathoadrenal pathways (that lasted for at least one week post-stress) including about 2-3 fold increases in the levels of tyrosine hydroxylase phosphorylation in the sympathetic ganglia and adrenal gland and a 1.8-fold increase in the expression of the Angiotensin II receptor type 1 protein in the adrenal gland of FS+ rats relative to FS- rats. We conclude that uncontrollable and unpredictable footshock stress can lead to elevation in systolic blood pressure when applied for an extended period of time (six weeks) in Wistar rats, and that these changes could be mediated by stress-induced modifications in sympathoadrenal pathways.


Asunto(s)
Presión Sanguínea/fisiología , Estrés Psicológico/fisiopatología , Estrés Psicológico/psicología , Animales , Enfermedad Crónica , Frecuencia Cardíaca/fisiología , Masculino , Actividad Motora/fisiología , Distribución Aleatoria , Ratas , Ratas Wistar
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