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1.
Methods Mol Biol ; 2848: 249-257, 2025.
Artículo en Inglés | MEDLINE | ID: mdl-39240527

RESUMEN

The production of Adeno-associated virus (AAV) vectors in the lab setting has typically involved expression in adherent cells followed by purification through ultracentrifugation in density gradients. This production method is, however, not easily scalable, presents high levels of cellular impurities that co-purify with the virus, and results in a mixture of empty and full capsids. Here we describe a detailed AAV production protocol that overcomes these limitations through AAV expression in suspension cells followed by AAV affinity purification and AAV polishing to separate empty and full capsids, resulting in high yields of ultra-pure AAV that is highly enriched in full capsids.


Asunto(s)
Dependovirus , Vectores Genéticos , Dependovirus/genética , Dependovirus/aislamiento & purificación , Vectores Genéticos/genética , Humanos , Cápside/química , Cápside/metabolismo , Virión/aislamiento & purificación , Virión/genética , Células HEK293 , Cromatografía de Afinidad/métodos , Ultracentrifugación/métodos , Proteínas de la Cápside/aislamiento & purificación , Proteínas de la Cápside/genética , Proteínas de la Cápside/química , Proteínas de la Cápside/metabolismo
2.
Ultrasonics ; 145: 107431, 2024 Sep 02.
Artículo en Inglés | MEDLINE | ID: mdl-39250841

RESUMEN

Sapphire ultrasonic vibration-assisted flexible polishing (UVAFP) is a promising technique for comprehensively improving the surface integrity of machined parts. The technique was performed on an ultra-precision machine tool with the in-situ monitoring systems in this paper, which aims to provide a new perspective for understanding the material removal mechanisms in the sapphire UVAFP process. A Taguchi L9 (43) orthogonal experiment was conducted to investigate the effects of feed distance, spindle speed, ultrasonic vibration (UV), and polishing time on the surface finish and material removal in the process. In addition, the effect of a polyurethane ball tool is not trivial. A single-factor experiment was conducted for exploring it. Based on a laser displacement measurement system and an acoustic emission sensor system, the characteristics of time-dependent ultrasonic amplitude and ultrasonic frequency for the sapphire UVAFP system were analyzed, with the effectiveness of UV demonstrated. Based on a three-component force measurement system, the characteristics of normal force and its relationship with process parameters and tool deformation were analyzed, with macro- and micro-level examined. In conclusion, this paper presents the characterization of UV and polishing force in the sapphire UVAFP process, providing novel insights into understanding the material removal mechanisms of sapphire and even more manufacturing problems.

3.
J Chromatogr A ; 1735: 465281, 2024 Oct 25.
Artículo en Inglés | MEDLINE | ID: mdl-39243589

RESUMEN

Therapeutic formats derived from the monoclonal antibody structure have been gaining significant traction in the biopharmaceutical market. Being structurally similar to mAbs, most Fc-containing therapeutics exhibit product-related impurities in the form of aggregates, charge variants, fragments, and glycoforms, which are inherently challenging to remove. In this work, we developed a workflow that employed rapid resin screening in conjunction with an in silico tool to identify and rank orthogonally selective processes for the removal of product-related impurities from a Fc-containing therapeutic product. Linear salt gradient screens were performed at various pH conditions on a set of ion-exchange, multimodal ion-exchange, and hydrophobic interaction resins. Select fractions from the screening experiments were analyzed by three different analytical techniques to characterize aggregates, charge variants, fragments, and glycoforms. The retention database generated by the resin screens and subsequent impurity characterization were then processed by an in silico tool that generated and ranked all possible two-step resin sequences for the removal of product-related impurities. A highly-ranked process was then evaluated and refined at the bench-scale to develop a completely flowthrough two-step polishing process which resulted in complete removal of the Man5 glycoform and aggregate impurities with a 73% overall yield. The successful implementation of the in silico mediated workflow suggests the possibility of a platformable workflow that could facilitate polishing process development for a wide variety of mAb-based therapeutics.


Asunto(s)
Anticuerpos Monoclonales , Simulación por Computador , Contaminación de Medicamentos , Fragmentos Fc de Inmunoglobulinas , Flujo de Trabajo , Anticuerpos Monoclonales/química , Anticuerpos Monoclonales/aislamiento & purificación , Fragmentos Fc de Inmunoglobulinas/química , Fragmentos Fc de Inmunoglobulinas/aislamiento & purificación , Cromatografía por Intercambio Iónico/métodos , Cricetulus , Interacciones Hidrofóbicas e Hidrofílicas , Células CHO , Animales
4.
BMC Oral Health ; 24(1): 1055, 2024 Sep 09.
Artículo en Inglés | MEDLINE | ID: mdl-39251975

RESUMEN

BACKGROUND: The purpose of this in vitro study was to investigate the effect of polishing post-treatment process on the torque loss ratio and microgap of Selective Laser Melting (SLM) abutments before and after mechanical cycling test through improving the surface roughness of the implant-abutment interface. MATERIALS AND METHODS: Forty SLM abutments were fabricated, with 20 underwent minor back-cutting, designated as polishing, in the implant-abutment interface. The abutments were divided into three groups: SLM abutments (group A), original abutments (group B), and polished SLM abutments (group C), each containing 20 abutments. Surface roughness was evaluated using a laser microscope. Implant-abutment specimens were subjected to mechanical cycling test, and disassembly torque values were measured before and after. Scanning electron microscope (SEM) was used to measure microgap after longitudinal sectioning of specimens. Correlation between surface roughness, torque loss ratio, and microgap were evaluated. LSD's test and Tamhane's T2 comparison were used to analyze the data (α = 0.05). RESULTS: The Sz value of polished SLM abutments (6.86 ± 0.64 µm) demonstrated a significant reduction compared to SLM abutments (26.52 ± 7.12 µm). The torque loss ratio of polished SLM abutments (24.16%) was significantly lower than SLM abutments (58.26%), while no statistically significant difference that original abutments (18.23%). The implant-abutment microgap of polished SLM abutments (2.38 ± 1.39 µm) was significantly lower than SLM abutments (8.69 ± 5.30 µm), and this difference was not statistically significant with original abutments (1.87 ± 0.81 µm). A significant positive correlation was identified between Sz values and the ratio of torque loss after cycling test (r = 0.903, P < 0.01), as well as Sz values and the microgap for all specimens in SLM abutments and polished SLM abutments (r = 0.800, P < 0.01). CONCLUSION: The findings of this study indicated that the polishing step of minor back-cutting can lead to a notable improvement in the roughness of SLM abutments interface, which subsequently optimized the implant-abutment fit. It can be seen that the application of minor back-cutting method has advanced the clinical use of SLM abutments.


Asunto(s)
Pilares Dentales , Diseño de Implante Dental-Pilar , Pulido Dental , Rayos Láser , Microscopía Electrónica de Rastreo , Propiedades de Superficie , Torque , Técnicas In Vitro , Pulido Dental/métodos , Humanos , Ensayo de Materiales , Análisis del Estrés Dental
5.
Cureus ; 16(8): e66029, 2024 Aug.
Artículo en Inglés | MEDLINE | ID: mdl-39221297

RESUMEN

Monolithic zirconia is widely used in dentistry due to its outstanding mechanical properties, biocompatibility, and aesthetic qualities. This review examines how different polishing and finishing methods impact the performance and appearance of monolithic zirconia restorations. Derived from zirconium, zirconia is a robust ceramic that exists in monoclinic, tetragonal, and cubic forms, with properties that prevent crack propagation. Monolithic zirconia, preferred over porcelain-fused-to-metal (PFM) crowns, offers better aesthetics and avoids chipping. Various surface treatments, such as polishing and glazing, enhance zirconia's smoothness and wear characteristics. Polished zirconia is less abrasive to enamel than glazed zirconia, making it more suitable for opposing teeth. Research indicates that polished zirconia has a smoother surface and higher fracture resistance compared to other dental ceramics. Surface roughness, which is influenced by the treatment method, is crucial in minimizing wear on opposing teeth. Polished monolithic zirconia also shows high flexural strength, chipping resistance, and translucency. While both polishing and glazing reduce brightness, polishing better preserves translucency. The literature identifies polishing as the best post-processing method for enhancing zirconia's surface quality and mechanical properties without compromising its load-bearing capacity. In conclusion, polishing and finishing significantly improve the aesthetic and clinical performance of monolithic zirconia, confirming its effectiveness for durable and visually appealing dental restorations.

6.
J Esthet Restor Dent ; 2024 Sep 03.
Artículo en Inglés | MEDLINE | ID: mdl-39228147

RESUMEN

OBJECTIVE: The purpose of this in vitro study was to evaluate the effect of staining, glazing, and polishing on the survival probability of monolithic crowns manufactured with preshaded stabilized zirconia with 5 mol% of yttrium oxide (5Y-TZP). MATERIALS AND METHODS: Monolithic crowns in the shape of an upper canine (1.5 mm of thickness) were manufactured by CAD/CAM, adhesively cemented on metallic foundation, and divided into 6 groups (n = 21): C (control), S (staining), G (glazing), P (polishing), SG (staining and glazing), and SP (staining and polishing). The survival probability was determined by step-stress accelerated life testing with a load applied to the palatine concavity of the crown. First, the specimens were subjected to a single-load to fracture test (SLF) and next to the fatigue test (5 Hz, thermocycling immersed in water varying 5-55°C), including the light (n = 9), moderate (n = 6), and aggressive (n = 3) loading profiles (load ranged between 20% and 60% of SLF). The survival probability was calculated considering the cycles for failure (CFF) and fatigue failure load (FFL) and illustrated using a Kaplan-Meier graph. The comparison among groups was performed using a Log-Rank test (α = 0.05). RESULTS: The mean value of SLF was 586.7 N. There was no difference among groups in survival probability, considering CFF and FFL. CONCLUSION: Staining, glazing, and polishing can be performed safely without damaging the mechanical behavior of 5Y-TZP monolithic crowns. CLINICAL SIGNIFICANCE: Staining is used to characterize and improve the esthetic of zirconia monolithic crowns. It can be used to reproduce the color gradient in the cervical region of the crown and pigmented grooves. This study showed that staining, glazing, and polishing did not affect the survival probability and the use of finishing procedures (glazing or polishing) after staining did not improve the survival probability of zirconia monolithic crowns.

7.
Oral Health Prev Dent ; 22: 459-464, 2024 Sep 12.
Artículo en Inglés | MEDLINE | ID: mdl-39264369

RESUMEN

PURPOSE: Resins composites are widely used in modern dentistry because of their aesthetic and physical properties. However, discoloration of anterior tooth restorations is a common complaint. Understanding the factors affecting the colour stability of resin composites can lead to longer-lasting repairs. This study aimed to evaluate and compare the colour changes of nanocomposite-based bulk-fill and universal resin composites after immersion in coffee using various polishing systems. MATERIALS AND METHODS: A total of 160 samples were prepared using four different composite groups, with 40 pieces for each combined group. Based on the finishing procedure, the samples were divided into four subgroups for each composite group. Three different polishing procedures were applied to the samples according to the manufacturer's instructions. The control group was not subjected to any treatment. Initial colour measurements were performed using a VITA Easyshade V spectrophotometer. After the initial measurements, the samples were immersed in a Nescafe coffee solution for seven days, followed by colour measurements. Data were analysed using the Kolmogorov-Smirnov test and two-way analysis of variance. Tukey's honest significant difference (HSD) test was used to determine differences between subgroups. RESULTS: The results indicate that bulk-fill resins exhibit more discolouration than universal composites; however, this difference was not statistically significant. The resin group with the smallest discolouration was Ceram X, and the most effective polishing method was Twist polishing. CONCLUSION: Final surface polishing significantly reduced the composites' discolouration. These findings support the selection of appropriate materials and polishing techniques to achieve aesthetic outcomes and colour stability in dental restorations.


Asunto(s)
Café , Color , Resinas Compuestas , Pulido Dental , Nanocompuestos , Resinas Compuestas/química , Nanocompuestos/química , Pulido Dental/métodos , Pulido Dental/instrumentación , Ensayo de Materiales , Propiedades de Superficie , Espectrofotometría , Humanos
8.
Cureus ; 16(7): e63955, 2024 Jul.
Artículo en Inglés | MEDLINE | ID: mdl-39104981

RESUMEN

Introduction Surface roughness (Ra) significantly impacts the aesthetic and functional qualities of dental prosthetics. Traditional polishing involves pumice, a material routinely used in dental practice. This study introduces Algishine as a potential cost-effective eco-friendly alternative. Materials and methods A 3D design software (Geomagic) created a Standard Tesselation Language (STL) file of 10 mm x 10 mm x 2 mm. 30 STL file outputs were generated. The output was milled in wax. This was then flasked and processed. 30 acrylic resin specimens were fabricated and divided into two groups. Group A was polished using traditional pumice, and Group B was polished using Algishine. The Ra of each sample was measured using surface profilometry, with three readings per sample averaged for each group. Results Kruskal-Wallis test was performed to compare the two groups with the pre-testing samples, which showed p<0.05; indicating that there was a significant difference between the two groups. The average Ra value for unpolished acrylic was 7.105, while the specimens polished with pumice showed an Ra value of 2.218; specimens polished with novel material Algishine showed an Ra value of 1.743. This illustrates that Algishine achieves surface smoothness significantly superior to commonly used polishing agent and pumice. Discussion The results of our study demonstrate that Algishine, a novel polishing material derived from recycled alginate, effectively reduces the Ra of acrylic resin. This finding has significant implications, both clinically and environmentally. The primary clinical benefit of a smoother acrylic resin surface is the enhanced aesthetic appearance and increased patient comfort. A polished surface reduces plaque accumulation, thereby decreasing the risk of oral infections and improving the longevity of the dental prosthesis. The results show that Algishine achieves surface smoothness comparable to or better than pumice indicating that it can maintain, if not enhance, these clinical outcomes. Dental professionals can confidently use Algishine, knowing it meets the high standards required for patient care. Conclusion Algishine effectively reduces the Ra of acrylic resin, suggesting it is a viable, eco-friendly alternative to traditional pumice for dental polishing procedures. This indicates potential benefits in maintaining clinical outcomes while promoting environmental sustainability.

9.
J Colloid Interface Sci ; 677(Pt B): 896-903, 2024 Aug 17.
Artículo en Inglés | MEDLINE | ID: mdl-39178669

RESUMEN

Microemulsion (ME) has been investigated as a chemical polishing (CP) fluid for effective polishing of single crystal potassium dihydrogen phosphate (KDP), perfectly avoiding the generation of mechanical stress. In this work, a water-in-deep eutectic solvent ME was proposed as the polishing fluid for CP of single crystal KDP. Deep eutectic solvent (DES) is formulated using n-octanol as hydrogen bond donor and methyltrioctylammonium chloride (MTOAC) as hydrogen bond acceptor, with a mass ratio of 2:1. The ME was prepared by mixing DES as the oil phase (12.5 %, wt.), a hydrochloric acid solution as the water phase (12.5 %, wt.), and isopropanol as the cosolvent (75 %, wt.), without adding any other surfactants. The properties of the ME were characterized by conductivity measurements and ultraviolet (UV) spectroscopy. The reactivity of ME with KDP was measured by the conductivity method, and it was higher at low pH values. A hydrochloric acid solution with a pH of 3 was selected as aqueous phase, considering its effects on particle size, salt loading, and static etching rate. The water content affects the polarity of ME and the final water content was determined to be 12.5 % to ensure high polarity of ME. The surface quality of the KDP crystals before and after polishing was examined using grazing incidence X-ray diffraction (GIXRD) analysis. The average roughness of the KDP crystal surface was decreased from 1.96 nm to 1.43 nm, and the root-mean-square (RMS) roughness was reduced from 2.81 nm to 1.86 nm, demonstrating a significant polishing effect. Finally, the polishing mechanism was elucidated in terms of the irreversible chemical reaction between the active components in the microemulsion and the KDP crystals.

10.
Nanomaterials (Basel) ; 14(16)2024 Aug 22.
Artículo en Inglés | MEDLINE | ID: mdl-39195409

RESUMEN

The stability of slurries used for chemical mechanical polishing (CMP) is a crucial concern in industrial chip production, influencing both the quality and cost-effectiveness of polishing fluids. In silicon wafer polishing, the conventional use of commercial neutral silica sol combined with organic bases often leads to slurry instability. To address this issue, this study proposes organic amines-specifically ethanolamine (MEA), ethylenediamine (EDA), and tetramethylammonium hydroxide (TMAOH)-as catalysts for synthesizing alkaline silica sol tailored for silicon wafer polishing fluids. Sol-gel experiments and zeta potential measurements demonstrate the efficacy of this approach in enhancing the stability of silica sol. The quantitative analysis of surface hydroxyl groups reveals a direct correlation between enhanced stability and increased hydroxyl content. The application of the alkaline silica sol in silicon wafer polishing fluids improves polishing rates and enhances surface flatness according to atomic force microscopy (AFM). In addition, electrochemical experiments validate the capability of this polishing solution to mitigate corrosion on silicon wafer surfaces. These findings hold significant implications for the advancement of chemical mechanical polishing techniques in the field of integrated circuit fabrication.

11.
ACS Appl Mater Interfaces ; 16(34): 45671-45677, 2024 Aug 28.
Artículo en Inglés | MEDLINE | ID: mdl-39137151

RESUMEN

Electronic devices continue to shrink in size while increasing in performance, making excess heat dissipation challenging. Traditional thermal interface materials (TIMs) such as thermal grease and pads face limitations in thermal conductivity and stability, particularly as devices scale down. Carbon nanotubes (CNTs) have emerged as promising candidates for TIMs because of their exceptional thermal conductivity and mechanical properties. However, the thermal conductivity of CNT films decreases when integrated into devices due to defects and bundling effects. This study employs a novel cross-sectional approach combining high-vacuum scanning thermal microscopy (SThM) with beam-exit cross-sectional polishing (BEXP) to investigate the nanoscale morphology and thermal properties of vertically aligned CNT bundles at low and room temperatures. Using appropriate thermal transport models, we extracted effective thermal conductivities of the vertically aligned nanotubes and obtained 4 W m-1 K-1 at 200 K and 37 W m-1 K-1 at 300 K. Additionally, non-negligible lateral thermal conductance between CNT bundles suggests more complex heat transfer mechanisms in these structures. These findings provide unique insights into nanoscale thermal transport in CNT bundles, which is crucial for optimizing novel thermal management strategies.

12.
Dent Mater J ; 2024 Aug 09.
Artículo en Inglés | MEDLINE | ID: mdl-39135236

RESUMEN

This study compared the effects of two surface preparation methods on two types of zirconia. Immediately prior to the placement of a monolithic zirconia crown, its morphology may be modified using a rotary cutting instrument for occlusal adjustments. The crown surface is scratched during the grinding process and, thus, requires polishing. Simplified zirconia crowns of 3Y and 5Y were fabricated and used as specimens. The surface roughness and gloss of the occlusal surfaces of specimens were measured and compared when a polishing compound was used after polishing points and when a silica-based coating was sintered. No significant differences were observed in surface roughness between 3Y and 5Y zirconia. The use of polishing compounds was effective because polishing points alone only resulted in a level of surface roughness that may cause wear on antagonist teeth. Although the silica-based coating improved surface properties, the polishing compound more effectively improved surface roughness.

13.
Bioinformation ; 20(6): 665-668, 2024.
Artículo en Inglés | MEDLINE | ID: mdl-39131539

RESUMEN

The fracture strength of implant supported zirconia-titanium base (Zi-Ti) base restorations with and without modification of submucosal cervical contour is of interest to dentists. 80 zirconia specimens were adjusted onto the Ti-base. One category consisted of specimens that underwent modification. Other category consisted of abutments without modification. There was polishing and recon touring at the interface of Zi-Ti base in cervical regions. Using the universal testing apparatus fracture resistance was assessed for every sample in every category in Newtons (N). The fracture strength of abutments with modification ranged between 4465.79 - 6523.50 N with mean value of 5604.24 ± 497.62 N. On the other hand, values of fracture strength varied between 5511.42 - 7064.33 N. in abutments without modification with mean fracture strength values of 6265.95 ± 331.61. It was observed that the fracture strength was lesser in abutments that underwent modification.

14.
J Chromatogr A ; 1732: 465202, 2024 Sep 13.
Artículo en Inglés | MEDLINE | ID: mdl-39079362

RESUMEN

Despite advancements in therapeutic monoclonal antibodies (mAbs) and cell line engineering, separating host cell proteins (HCPs) from mAbs during downstream purification remains challenging. Therefore, in this study, we developed a novel multimodal chromatography (MMC) resin to enhance HCP removal during mAb polishing processes. We evaluated the impact of both ligand structure and pore size of the MMC resin by purifying a post-protein A chromatography solution in flow-through mode. We observed that the efficiency of HCP clearance depended on the hydrophobic moiety structure of the ligand and predicted the mAb purification capability of MMC through linear salt-gradient elution experiments involving a mixture of transferrin, bovine serum albumin (BSA), and pepsin. Our findings revealed that the prototype immobilized 1,12-dodecanediamine via the formyl group exhibited the best performance attributed to its long alkyl chain. Furthermore, an investigation of effects of base bead pore size on HCP capacity using cellulose base beads of five different pore sizes showed that larger pore resin base beads had the highest HCP removal capacity. Specifically, MMC resins with a pore diameter exceeding 440 nm reduced the HCP level by three orders of magnitude under high mAb loading conditions (> 1000 mg/mL-resin). The MMC resin developed in this study, along with the insights gained into ligand structure and pore size, not only enhances mAb polishing efficiency but also contributes to improving downstream processes in mAb biopharmaceutical production.


Asunto(s)
Anticuerpos Monoclonales , Cricetulus , Albúmina Sérica Bovina , Anticuerpos Monoclonales/química , Anticuerpos Monoclonales/aislamiento & purificación , Animales , Células CHO , Ligandos , Albúmina Sérica Bovina/química , Porosidad , Cromatografía de Afinidad/métodos , Proteína Estafilocócica A/química , Transferrina/química , Transferrina/aislamiento & purificación , Pepsina A/química , Pepsina A/metabolismo , Proteínas/aislamiento & purificación , Proteínas/química , Resinas Sintéticas/química , Interacciones Hidrofóbicas e Hidrofílicas
15.
J Environ Manage ; 366: 121708, 2024 Aug.
Artículo en Inglés | MEDLINE | ID: mdl-38996598

RESUMEN

The utilization of rare earth polishing powder waste (RPW) to prepare antibacterial ceramics can effectively avoid problems of pollution in the recycling process and waste of rare earth resources. Herein, a novel RPW-based antibacterial ceramics was developed, which possesses the core-shell structure with ceramics as the cores and the CeO2/BiOCl as the superficial coating. The antibacterial ceramics display notable antibacterial activity, and the inactivation rates of 3.3 log under visible light irradiation in 30 min and 2.4 log under darkness in 1 h were achieved, and the zone of inhibition values was found to be 16.6 mm for E.coil. The hardness of antibacterial ceramics was measured to be 897 (±38) HV, higher than commercial porcelain's hardness (600 HV). The antibacterial mechanism was verified by the Ce ion release, reactive species, and fluorescence-based live/dead cells. This study presents a novel antibacterial ceramic structure and green economic reuse method of rare earth waste.


Asunto(s)
Antibacterianos , Cerámica , Metales de Tierras Raras , Cerámica/química , Antibacterianos/farmacología , Antibacterianos/química , Metales de Tierras Raras/química , Reciclaje
16.
ACS Appl Mater Interfaces ; 16(29): 38744-38756, 2024 Jul 24.
Artículo en Inglés | MEDLINE | ID: mdl-38981068

RESUMEN

Glass ceramic (GC) is the most promising material for objective lenses for extreme ultraviolet lithography that must meet the subnanometer precision, which is characterized by low values of high spatial frequency surface roughness (HSFR). However, the HSFR of GC is typically degraded during ion beam figuring (IBF). Herein, a developed method for constructing molecular dynamics (MD) models of GC was presented, and the formation mechanisms of surface morphologies were investigated. The results indicated that the generation of the dot-like microstructure was the result of the difference in the erosion rate caused by the difference in the intrinsic properties between ceramic phases (CPs) and glass phases (GPs). Further, the difference in the microstructure of the IBF surface under different beam angles was mainly caused by the difference in the two types of sputtering. Quantum mechanical calculations showed that the presence of interstitial atoms would result in electron rearrangement and that the electron localization can lead to a reduction in CP stability. To obtain a homogeneous surface, the effects of beam parameters on the heterogeneous surface were systematically investigated based on the proposed MD model. Then, a novel ion beam modification (IBM) method was proposed and demonstrated by TEM and GIXRD. The range of ion beam smoothing parameters that could effectively converge the HSFR of the modified surface was determined through numerous experiments. Using the optimized beam parameters, an ultrathin homogeneous modified surface within 3 nm was obtained. The HSFR of GC smoothed by ion beam modification-assisted smoothing (IBMS) dropped from 0.348 to 0.090 nm, a 74% reduction. These research results offer a deeper understanding of the morphology formation mechanisms of the GC surfaces involved in ion beam processing and may point to a new approach for achieving ultrasmooth heterostructure surfaces down to the subnanometer scale.

17.
BMC Genomics ; 25(1): 679, 2024 Jul 08.
Artículo en Inglés | MEDLINE | ID: mdl-38978005

RESUMEN

BACKGROUND: Oxford Nanopore provides high throughput sequencing platforms able to reconstruct complete bacterial genomes with 99.95% accuracy. However, even small levels of error can obscure the phylogenetic relationships between closely related isolates. Polishing tools have been developed to correct these errors, but it is uncertain if they obtain the accuracy needed for the high-resolution source tracking of foodborne illness outbreaks. RESULTS: We tested 132 combinations of assembly and short- and long-read polishing tools to assess their accuracy for reconstructing the genome sequences of 15 highly similar Salmonella enterica serovar Newport isolates from a 2020 onion outbreak. While long-read polishing alone improved accuracy, near perfect accuracy (99.9999% accuracy or ~ 5 nucleotide errors across the 4.8 Mbp genome, excluding low confidence regions) was only obtained by pipelines that combined both long- and short-read polishing tools. Notably, medaka was a more accurate and efficient long-read polisher than Racon. Among short-read polishers, NextPolish showed the highest accuracy, but Pilon, Polypolish, and POLCA performed similarly. Among the 5 best performing pipelines, polishing with medaka followed by NextPolish was the most common combination. Importantly, the order of polishing tools mattered i.e., using less accurate tools after more accurate ones introduced errors. Indels in homopolymers and repetitive regions, where the short reads could not be uniquely mapped, remained the most challenging errors to correct. CONCLUSIONS: Short reads are still needed to correct errors in nanopore sequenced assemblies to obtain the accuracy required for source tracking investigations. Our granular assessment of the performance of the polishing pipelines allowed us to suggest best practices for tool users and areas for improvement for tool developers.


Asunto(s)
Benchmarking , Brotes de Enfermedades , Genoma Bacteriano , Nanoporos , Secuenciación de Nanoporos/métodos , Secuenciación de Nucleótidos de Alto Rendimiento/métodos , Salmonella enterica/genética , Salmonella enterica/aislamiento & purificación , Humanos , Filogenia
18.
Sci Rep ; 14(1): 15144, 2024 Jul 02.
Artículo en Inglés | MEDLINE | ID: mdl-38956301

RESUMEN

Porous ceramics were synthesized using porcelain tile polishing residue (PTPR) and slaked lime (Ca(OH)2) as a reinforcing agent through a hydrothermal autoclaving method. The process parameters, including the quantity of slaked lime added, the hydrothermal autoclaving temperature, and the reaction duration, were optimized meticulously. The composition, structure, thermal and physical properties of the samples were thoroughly analyzed via Brunauer-Emmett-Teller (BET) measurements, powder X-ray diffraction (PXRD), and scanning electron microscopy (SEM). The results indicated that the incorporation of slaked lime and hydrothermal autoclaving led to the formation of calcium silicate hydrate, which corresponded with an enhancement in the strength of the sample. Notably, when the quantity of slaked lime added was optimized at 30 wt%, the formation of tobermorite (5CaO·6SiO2·5H2O) was detected. At a hydrothermal autoclaving temperature of 150 °C, the formation of only sheet-like calcium silicate hydrate was observed. In contrast, at an elevated temperature of 180 °C and 210 °C, needle-like tobermorite was successfully synthesized. The porous ceramic with the most favorable structure was obtained through autoclaving at 180 °C for 10 h with 30 wt% slaked lime, exhibiting a total pore volume of 0.11 mL/g, a specific surface area of 26.35 m2/g, and a mesoporous volume fraction of 90.40%.

19.
Materials (Basel) ; 17(14)2024 Jul 19.
Artículo en Inglés | MEDLINE | ID: mdl-39063869

RESUMEN

The aim of this study is to investigate how two different polishing techniques affect the color stability, surface roughness, and changes in surface morphology of aged and coffee-stained bulk-fill resin composites. A total of 112 disc-shaped samples were prepared using Omnichroma Flow Bulk (OB), Charisma Bulk Flow One (CB), Estelite Bulk Fill Flow (EB), and Estelite Sigma Quick (control). Samples were divided into two subgroups (n = 16) and aged using thermocycling. A profilometer was used to measure the surface roughness (Ra) and a spectrophotometer was used for color stability (ΔE00). The EB group had the highest Ra values both before aging (disc: 0.23 ± 0.05, twist: 0.42 ± 0.05) and after aging (discs: 0.28 ± 0.04, twist: 0.46 ± 0.05). The OB group had the highest ΔE00 values before and after aging (discs: 3.06 ± 0.54, twist 3.05 ± 0.41) and the highest after coffee-staining (discs: 3.75 ± 0.70, twist: 3.91 ± 0.57). Re-polishing reduced the ΔE00 values in all materials but did not restore all to clinically acceptable levels. According to the results of this study, it can be concluded that the surface roughness and color stability of resin composites are notably influenced by the polishing technique, aging process, and coffee staining. Specimens that were polished using the multi-stage Super-Snap discs consistently exhibited smoother surfaces across all bulk-fill resin composites compared to those polished with the two-stage Diacomp plus Twist.

20.
Front Dent ; 21: 16, 2024.
Artículo en Inglés | MEDLINE | ID: mdl-38993795

RESUMEN

Objectives: Evaluation of the effect of grinding on flexural strength of zirconia after low temperature degradation (LTD) and pH-cycling. Materials and Methods: Sixty-four bar-shaped specimens of yttria-stabilized tetragonal polycrystalline zirconia were milled, sintered, wet-polished, and divided into 8 groups (N=8). The four control groups were not aged while artificial aging was performed in the 4 experimental groups in three steps including LTD in steam for 40h, pH-cycling, and tooth brushing for artificial aging. All groups underwent surface preparations as follows: standard polishing without surface treatment (Sp), grinding with a blue-yellow band diamond instrument (Gr); grinding with a diamond rotary instrument (DRI) and then over-glazing (Gl); grinding with a DRI followed by two-step intraoral polishing (Po); standard polishing and aging (Sp-Ag); grinding and aging (Gr-Ag), grinding, over-glazing and aging (Gl-Ag); and grinding, polishing and aging (Po-Ag). Monoclinic content was assessed in one specimen of each group by X-ray diffraction (XRD). The 3-point flexural strength test was performed in a universal testing machine. The results were analyzed with two-way ANOVA and Tukey's test (α=0.05). Results: Mean flexural strength (Mpa) was significantly higher in groups Gr and Po compared to group Sp (both, P<0.0001) and group Gl (both, P<0.0001). In XRD analyses, the highest monoclinic phase before aging was observed in group Gr (12.6%), and after aging in group Gr-Ag (51.2%). Conclusion: Grinding and polishing increased the flexural strength, while glazing did not exhibit any significant effect on this parameter. Furthermore, aging did not adversely affect flexural strength.

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