RESUMEN
The protein encoded by the vaccinia virus D4R gene has base excision repair uracil-DNA N-glycosylase (vvUNG) activity and also acts as a processivity factor in the viral replication complex. The use of a protein unlike PolN/PCNA sliding clamps is a unique feature of orthopoxviral replication, providing an attractive target for drug design. However, the intrinsic processivity of vvUNG has never been estimated, leaving open the question whether it is sufficient to impart processivity to the viral polymerase. Here, we use the correlated cleavage assay to characterize the translocation of vvUNG along DNA between two uracil residues. The salt dependence of the correlated cleavage, together with the similar affinity of vvUNG for damaged and undamaged DNA, support the one-dimensional diffusion mechanism of lesion search. Unlike short gaps, covalent adducts partly block vvUNG translocation. Kinetic experiments show that once a lesion is found it is excised with a probability ~0.76. Varying the distance between two uracils, we use a random walk model to estimate the mean number of steps per association with DNA at ~4200, which is consistent with vvUNG playing a role as a processivity factor. Finally, we show that inhibitors carrying a tetrahydro-2,4,6-trioxopyrimidinylidene moiety can suppress the processivity of vvUNG.
Asunto(s)
Uracil-ADN Glicosidasa , Virus Vaccinia , Uracil-ADN Glicosidasa/genética , Uracil-ADN Glicosidasa/metabolismo , Virus Vaccinia/genética , ADN/metabolismo , Replicación Viral , Reparación del ADN , Uracilo/metabolismo , ADN Viral/genética , ADN Viral/metabolismo , Replicación del ADNRESUMEN
Oedaleus decorus is a widely distributed acridid over the Eurasian semi-arid territories, from the Atlantic coast to the Pacific coast. In many semi-arid territories, O. decorus was and is the most important pest, but in the south-eastern part of West Siberian Plain, it was not considered a pest until the 1960s. We compared two sets of data on the acridid distribution in the region: before 1960 and from 1961 until 2021. Until the 1960s, the species occurred mainly in the southern steppes. Since the 1960s, its distribution changed significantly. Nowadays, it occupies almost all local steppes and the southern part of the forest-steppes and can be also found on the eastern side of the Ob River. These shifts may be explained by both climatic changes and changes in human activities. During upsurges the densities of O. decorus were often more than one to two adults per square meter. It is often abundant in the same habitats and in the same periods as the Italian locust (Calliptamus italicus)-one of the most important acridid pests. This means during joint outbreaks these two species can simultaneously damage almost all spectrum of plants.