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[This corrects the article DOI: 10.3389/fpsyt.2023.1155812.].

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Introduction: The early diagnosis and classification of social anxiety disorder (SAD) are crucial clinical support tasks for medical practitioners in designing patient treatment programs to better supervise the progression and development of SAD. This paper proposes an effective method to classify the severity of SAD into different grading (severe, moderate, mild, and control) by using the patterns of brain information flow with their corresponding graphical networks. Methods: We quantified the directed information flow using partial directed coherence (PDC) and the topological networks by graph theory measures at four frequency bands (delta, theta, alpha, and beta). The PDC assesses the causal interactions between neuronal units of the brain network. Besides, the graph theory of the complex network identifies the topological structure of the network. Resting-state electroencephalogram (EEG) data were recorded for 66 patients with different severities of SAD (22 severe, 22 moderate, and 22 mild) and 22 demographically matched healthy controls (HC). Results: PDC results have found significant differences between SAD groups and HCs in theta and alpha frequency bands (p < 0.05). Severe and moderate SAD groups have shown greater enhanced information flow than mild and HC groups in all frequency bands. Furthermore, the PDC and graph theory features have been used to discriminate three classes of SAD from HCs using several machine learning classifiers. In comparison to the features obtained by PDC, graph theory network features combined with PDC have achieved maximum classification performance with accuracy (92.78%), sensitivity (95.25%), and specificity (94.12%) using Support Vector Machine (SVM). Discussion: Based on the results, it can be concluded that the combination of graph theory features and PDC values may be considered an effective tool for SAD identification. Our outcomes may provide new insights into developing biomarkers for SAD diagnosis based on topological brain networks and machine learning algorithms.

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BACKGROUND AND OBJECTIVE: Brain connectivity plays a pivotal role in understanding the brain's information processing functions by providing various details including magnitude, direction, and temporal dynamics of inter-neuron connections. While the connectivity may be classified as structural, functional and causal, a complete in-vivo directional analysis is guaranteed by the latter and is referred to as Effective Connectivity (EC). Two most widely used EC techniques are Directed Transfer Function (DTF) and Partial Directed Coherence (PDC) which are based on multivariate autoregressive models. The drawbacks of these techniques include poor frequency resolution and the requirement for experimental approach to determine signal normalization and thresholding techniques in identifying significant connectivities between multivariate sources. METHODS: In this study, the drawbacks of DTF and PDC are addressed by proposing a novel technique, termed as Efficient Effective Connectivity (EEC), for the estimation of EC between multivariate sources using AR spectral estimation and Granger causality principle. In EEC, a linear predictive filter with AR coefficients obtained via multivariate EEG is used for signal prediction. This leads to the estimation of full-length signals which are then transformed into frequency domain by using Burg spectral estimation method. Furthermore, the newly proposed normalization method addressed the effect on each source in EEC using the sum of maximum connectivity values over the entire frequency range. Lastly, the proposed dynamic thresholding works by subtracting the first moment of causal effects of all the sources on one source from individual connections present for that source. RESULTS: The proposed method is evaluated using synthetic and real resting-state EEG of 46 healthy controls. A 3D-Convolutional Neural Network is trained and tested using the PDC and EEC samples. The result indicates that compared to PDC, EEC improves the EEG eye-state classification accuracy, sensitivity and specificity by 5.57%, 3.15% and 8.74%, respectively. CONCLUSION: Correct identification of all connections in synthetic data and improved resting-state classification performance using EEC proved that EEC gives better estimation of directed causality and indicates that it can be used for reliable understanding of brain mechanisms. Conclusively, the proposed technique may open up new research dimensions for clinical diagnosis of mental disorders.

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Drowsiness is one of the main causes of road accidents and endangers the lives of road users. Recently, there has been considerable interest in utilizing features extracted from electroencephalography (EEG) signals to detect driver drowsiness. However, in most of the work performed in this area, the eyeblink or ocular artifacts present in EEG signals are considered noise and are removed during the preprocessing stage. In this study, we examined the possibility of extracting features from the EEG ocular artifacts themselves to perform classification between alert and drowsy states. In this study, we used the BLINKER algorithm to extract 25 blink-related features from a public dataset comprising raw EEG signals collected from 12 participants. Different machine learning classification models, including the decision tree, the support vector machine (SVM), the K-nearest neighbor (KNN) method, and the bagged and boosted tree models, were trained based on the seven selected features. These models were further optimized to improve their performance. We were able to show that features from EEG ocular artifacts are able to classify drowsy and alert states, with the optimized ensemble-boosted trees yielding the highest accuracy of 91.10% among all classic machine learning models.

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The resting-state functional magnetic resonance imaging (rs-fMRI) modality has gained widespread acceptance as a promising method for analyzing a variety of neurological and psychiatric diseases. It is established that resting-state neuroimaging data exhibit fractal behavior, manifested in the form of slow-decaying auto-correlation and power-law scaling of the power spectrum across low-frequency components. With this property, the rs-fMRI signal can be broken down into fractal and nonfractal components. The fractal nature originates from several sources, such as cardiac fluctuations, respiration and system noise, and carries no information on the brain's neuronal activities. As a result, the conventional correlation of rs-fMRI signals may not accurately reflect the functional dynamic of spontaneous neuronal activities. This problem can be solved by using a better representation of neuronal activities provided by the connectivity of nonfractal components. In this work, the nonfractal connectivity of rs-fMRI is used to distinguish Alzheimer's patients from healthy controls. The automated anatomical labeling (AAL) atlas is used to extract the blood-oxygenation-level-dependent time series signals from 116 brain regions, yielding a 116 × 116 nonfractal connectivity matrix. From this matrix, significant connections evaluated using the p-value are selected as an input to a classifier for the classification of Alzheimer's vs. normal controls. The nonfractal-based approach provides a good representation of the brain's neuronal activity. It outperformed the fractal and Pearson-based connectivity approaches by 16.4% and 17.2%, respectively. The classification algorithm developed based on the nonfractal connectivity feature and support vector machine classifier has shown an excellent performance, with an accuracy of 90.3% and 83.3% for the XHSLF dataset and ADNI dataset, respectively. For further validation of our proposed work, we combined the two datasets (XHSLF+ADNI) and still received an accuracy of 90.2%. The proposed work outperformed the recently published work by a margin of 8.18% and 11.2%, respectively.

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Motor imagery (MI)-based brain-computer interfaces have gained much attention in the last few years. They provide the ability to control external devices, such as prosthetic arms and wheelchairs, by using brain activities. Several researchers have reported the inter-communication of multiple brain regions during motor tasks, thus making it difficult to isolate one or two brain regions in which motor activities take place. Therefore, a deeper understanding of the brain's neural patterns is important for BCI in order to provide more useful and insightful features. Thus, brain connectivity provides a promising approach to solving the stated shortcomings by considering inter-channel/region relationships during motor imagination. This study used effective connectivity in the brain in terms of the partial directed coherence (PDC) and directed transfer function (DTF) as intensively unconventional feature sets for motor imagery (MI) classification. MANOVA-based analysis was performed to identify statistically significant connectivity pairs. Furthermore, the study sought to predict MI patterns by using four classification algorithms-an SVM, KNN, decision tree, and probabilistic neural network. The study provides a comparative analysis of all of the classification methods using two-class MI data extracted from the PhysioNet EEG database. The proposed techniques based on a probabilistic neural network (PNN) as a classifier and PDC as a feature set outperformed the other classification and feature extraction techniques with a superior classification accuracy and a lower error rate. The research findings indicate that when the PDC was used as a feature set, the PNN attained the greatest overall average accuracy of 98.65%, whereas the same classifier was used to attain the greatest accuracy of 82.81% with the DTF. This study validates the activation of multiple brain regions during a motor task by achieving better classification outcomes through brain connectivity as compared to conventional features. Since the PDC outperformed the DTF as a feature set with its superior classification accuracy and low error rate, it has great potential for application in MI-based brain-computer interfaces.

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The functional connectivity (FC) patterns of resting-state functional magnetic resonance imaging (rs-fMRI) play an essential role in the development of autism spectrum disorders (ASD) classification models. There are available methods in literature that have used FC patterns as inputs for binary classification models, but the results barely reach an accuracy of 80%. Additionally, the generalizability across multiple sites of the models has not been investigated. Due to the lack of ASD subtypes identification model, the multi-class classification is proposed in the present study. This study aims to develop automated identification of autism spectrum disorder (ASD) subtypes using convolutional neural networks (CNN) using dynamic FC as its inputs. The rs-fMRI dataset used in this study consists of 144 individuals from 8 independent sites, labeled based on three ASD subtypes, namely autistic disorder (ASD), Asperger's disorder (APD), and pervasive developmental disorder not otherwise specified (PDD-NOS). The blood-oxygen-level-dependent (BOLD) signals from 116 brain nodes of automated anatomical labeling (AAL) atlas are used, where the top-ranked node is determined based on one-way analysis of variance (ANOVA) of the power spectral density (PSD) values. Based on the statistical analysis of the PSD values of 3-level ASD and normal control (NC), putamen_R is obtained as the top-ranked node and used for the wavelet coherence computation. With good resolution in time and frequency domain, scalograms of wavelet coherence between the top-ranked node and the rest of the nodes are used as dynamic FC feature input to the convolutional neural networks (CNN). The dynamic FC patterns of wavelet coherence scalogram represent phase synchronization between the pairs of BOLD signals. Classification algorithms are developed using CNN and the wavelet coherence scalograms for binary and multi-class identification were trained and tested using cross-validation and leave-one-out techniques. Results of binary classification (ASD vs. NC) and multi-class classification (ASD vs. APD vs. PDD-NOS vs. NC) yielded, respectively, 89.8% accuracy and 82.1% macro-average accuracy, respectively. Findings from this study have illustrated the good potential of wavelet coherence technique in representing dynamic FC between brain nodes and open possibilities for its application in computer aided diagnosis of other neuropsychiatric disorders, such as depression or schizophrenia.

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Alcohol Use Disorder (AUD) is a chronic relapsing brain disease characterized by excessive alcohol use, loss of control over alcohol intake, and negative emotional states under no alcohol consumption. The key factor in successful treatment of AUD is the accurate diagnosis for better medical and therapy management. Conventionally, for individuals to be diagnosed with AUD, certain criteria as outlined in the Diagnostic and Statistical Manual of Mental Disorders (DSM) should be met. However, this process is subjective in nature and could be misleading due to memory problems and dishonesty of some AUD patients. In this paper, an assessment scheme for objective diagnosis of AUD is proposed. For this purpose, EEG recording of 31 healthy controls and 31 AUD patients are used for the calculation of effective connectivity (EC) between the various regions of the brain Default Mode Network (DMN). The EC is estimated using partial directed coherence (PDC) which are then used as input to a 3D Convolutional Neural Network (CNN) for binary classification of AUD cases. Using 5-fold cross validation, the classification of AUD vs. HC effective connectivity matrices using the proposed 3D-CNN gives an accuracy of 87.85 ± 4.64 %. For further validation, 32 and 30 subjects are randomly selected for training and testing, respectively, giving 100% correct classification of all the testing subjects.

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Mental stress has been identified as a significant cause of several bodily disorders, such as depression, hypertension, neural and cardiovascular abnormalities. Conventional stress assessment methods are highly subjective and tedious and tend to lack accuracy. Machine-learning (ML)-based computer-aided diagnosis systems can be used to assess the mental state with reasonable accuracy, but they require offline processing and feature extraction, rendering them unsuitable for real-time applications. This paper presents a real-time mental stress assessment approach based on convolutional neural networks (CNNs). The CNN-based approach afforded real-time mental stress assessment with an accuracy as high as 96%, the sensitivity of 95%, and specificity of 97%. The proposed approach is compared with state-of-the-art ML techniques in terms of accuracy, time utilisation, and quality of features.

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In this paper, we present an evaluation of four encoder-decoder CNNs in the segmentation of the prostate gland in T2W magnetic resonance imaging (MRI) image. The four selected CNNs are FCN, SegNet, U-Net, and DeepLabV3+, which was originally proposed for the segmentation of road scene, biomedical, and natural images. Segmentation of prostate in T2W MRI images is an important step in the automatic diagnosis of prostate cancer to enable better lesion detection and staging of prostate cancer. Therefore, many research efforts have been conducted to improve the segmentation of the prostate gland in MRI images. The main challenges of prostate gland segmentation are blurry prostate boundary and variability in prostate anatomical structure. In this work, we investigated the performance of encoder-decoder CNNs for segmentation of prostate gland in T2W MRI. Image pre-processing techniques including image resizing, center-cropping and intensity normalization are applied to address the issues of inter-patient and inter-scanner variability as well as the issue of dominating background pixels over prostate pixels. In addition, to enrich the network with more data, to increase data variation, and to improve its accuracy, patch extraction and data augmentation are applied prior to training the networks. Furthermore, class weight balancing is used to avoid having biased networks since the number of background pixels is much higher than the prostate pixels. The class imbalance problem is solved by utilizing weighted cross-entropy loss function during the training of the CNN model. The performance of the CNNs is evaluated in terms of the Dice similarity coefficient (DSC) and our experimental results show that patch-wise DeepLabV3+ gives the best performance with DSC equal to 92 . 8 % . This value is the highest DSC score compared to the FCN, SegNet, and U-Net that also competed the recently published state-of-the-art method of prostate segmentation.

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In this work, an algorithm for the classification of six motor functions from an electroencephalogram (EEG) signal that combines a common spatial pattern (CSP) filter and a continuous wavelet transform (CWT), is investigated. The EEG data comprise six grasp-and-lift events, which are used to investigate the potential of using EEG as input signals with brain computer interface devices for controlling prosthetic devices for upper limb movement. Selected EEG channels are the ones located over the motor cortex, C3, Cz and C4, as well as at the parietal region, P3, Pz and P4. In general, the proposed algorithm includes three main stages, band pass filtering, CSP filtering, and wavelet transform and training on GoogLeNet for feature extraction, feature learning and classification. The band pass filtering is performed to select the EEG signal in the band of 7 Hz to 30 Hz while eliminating artifacts related to eye blink, heartbeat and muscle movement. The CSP filtering is applied on two-class EEG signals that will result in maximizing the power difference between the two-class dataset. Since CSP is mathematically developed for two-class events, the extension to the multiclass paradigm is achieved by using the approach of one class versus all other classes. Subsequently, continuous wavelet transform is used to convert the band pass and CSP filtered signals from selected electrodes to scalograms which are then converted to images in grayscale format. The three scalograms from the motor cortex regions and the parietal region are then combined to form two sets of RGB images. Next, these RGB images become the input to GoogLeNet for classification of the motor EEG signals. The performance of the proposed classification algorithm is evaluated in terms of precision, sensitivity, specificity, accuracy with average values of 94.8%, 93.5%, 94.7%, 94.1%, respectively, and average area under the receiver operating characteristic (ROC) curve equal to 0.985. These results indicate a good performance of the proposed algorithm in classifying grasp-and-lift events from EEG signals.

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BACKGROUND AND PURPOSE: Ultrasound imaging is a very essential technique in medical diagnosis due to its being safe, economical and non-invasive nature. Despite its popularity, the US images, however, are corrupted with speckle noise, which reduces US images qualities, hampering image interpretation and processing stage. Hence, there are many efforts made by researches to formulate various despeckling methods for speckle reduction in US images. METHODS: In this paper, a subspace-based speckle reduction technique in ultrasound images is proposed. The fundamental principle of subspace-based despeckling technique is to convert multiplicative speckle noise into additive via logarithmic transformation, then to decompose the vector space of the noisy image into signal and noise subspaces. Image enhancement is achieved by nulling the noise subspace and estimating the clean image from the remaining signal subspace. Linear estimation of the clean image is derived by minimizing image distortion while maintaining the residual noise energy below some given threshold. The real US data for validation purposes were acquired under the IRB protocol (200210851-7) at the University of California Davis, which is also consistent with NIH requirements. RESULTS: Experiments are carried out using a synthetically generated B-mode ultrasound image, a computer generated cyst image and real ultrasound images. The performance of the proposed technique is compared with Lee, homomorphic wavelet and squeeze box filter (SBF) in terms of noise variance reduction, mean preservation, texture preservation and ultrasound despeckling assessment index (USDSAI). The results indicate better noise reduction capability with the simulated images by the SDC than Lee, Wavelet and SBF in addition to less blurry effect. With the real case scenario, the SDC, Lee, Wavelet and SBF are tested with images obtained from raw radio frequency (RF) data. Results generated using real US data indicate that, in addition to good contrast enhancement, the autocorrelation results shows better preservation of image texture by SDC than Lee, Wavelet and SBF. CONCLUSION: In general, the performance of the SDC filter is better than Lee, Wavelet and SBF in terms of noise reduction, improvement in image contrast and preservation of the autocorrelation profiles. Furthermore, the filter required less computational time compared to Lee, Wavelet and SBF, which indicates its suitability for real time application.

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