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1.
J Mol Biol ; 389(3): 606-18, 2009 Jun 12.
Artículo en Inglés | MEDLINE | ID: mdl-19414016

RESUMEN

The transcription factor Tbx20 acts within a hierarchy of T-box factors in lineage specification and morphogenesis in the mammalian heart and is mutated in congenital heart disease. T-box family members share a approximately 20-kDa DNA-binding domain termed the T-box. The question of how highly homologous T-box proteins achieve differential transcriptional control in heart development, while apparently binding to the same DNA sequence, remains unresolved. Here we show that the optimal DNA recognition sequence for the T-box of Tbx20 corresponds to a T-half-site. Furthermore, we demonstrate using purified recombinant domains that distinct T-boxes show significant differences in the affinity and kinetics of binding and in conformational stability, with the T-box of Tbx20 displaying molten globule character. Our data highlight unique features of Tbx20 and suggest mechanistic ways in which cardiac T-box factors might interact synergistically and/or competitively within the cardiac regulatory network.


Asunto(s)
ADN/química , Miocardio/metabolismo , Proteínas de Dominio T Box/química , Secuencia de Aminoácidos , Animales , Secuencia de Bases , Secuencia de Consenso , Humanos , Ratones , Datos de Secuencia Molecular , Estabilidad Proteica , Estructura Terciaria de Proteína
2.
J Mol Biol ; 382(3): 708-20, 2008 Oct 10.
Artículo en Inglés | MEDLINE | ID: mdl-18674544

RESUMEN

Class I hydrophobins are fungal proteins that self-assemble into robust amphipathic rodlet monolayers on the surface of aerial structures such as spores and fruiting bodies. These layers share many structural characteristics with amyloid fibrils and belong to the growing family of functional amyloid-like materials produced by microorganisms. Although the three-dimensional structure of the soluble monomeric form of a class I hydrophobin has been determined, little is known about the molecular structure of the rodlets or their assembly mechanism. Several models have been proposed, some of which suggest that the Cys3-Cys4 loop has a critical role in the initiation of assembly or in the polymeric structure. In order to provide insight into the relationship between hydrophobin sequence and rodlet assembly, we investigated the role of the Cys3-Cys4 loop in EAS, a class I hydrophobin from Neurospora crassa. Remarkably, deletion of up to 15 residues from this 25-residue loop does not impair rodlet formation or reduce the surface activity of the protein, and the physicochemical properties of rodlets formed by this mutant are indistinguishable from those of its full-length counterpart. In addition, the core structure of the truncation mutant is essentially unchanged. Molecular dynamics simulations carried out on the full-length protein and this truncation mutant binding to an air-water interface show that, although it is hydrophobic, the loop does not play a role in positioning the protein at the surface. These results demonstrate that the Cys3-Cys4 loop does not have an integral role in the formation or structure of the rodlets and that the major determinant of the unique properties of these proteins is the amphipathic core structure, which is likely to be preserved in all hydrophobins despite the high degree of sequence variation across the family.


Asunto(s)
Cisteína/química , Proteínas Fúngicas/química , Proteínas Fúngicas/metabolismo , Neurospora crassa , Estructura Terciaria de Proteína , Aire , Secuencia de Aminoácidos , Simulación por Computador , Cristalografía por Rayos X , Cisteína/metabolismo , Proteínas Fúngicas/genética , Proteínas Fúngicas/ultraestructura , Modelos Moleculares , Datos de Secuencia Molecular , Neurospora crassa/citología , Neurospora crassa/metabolismo , Proteínas Nucleares/química , Proteínas Nucleares/genética , Proteínas Nucleares/metabolismo , Proteínas Nucleares/ultraestructura , Alineación de Secuencia , Homología de Secuencia de Aminoácido , Propiedades de Superficie , Agua
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