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1.
Molecules ; 26(14)2021 Jul 10.
Artículo en Inglés | MEDLINE | ID: mdl-34299473

RESUMEN

Resonance-assisted hydrogen bonds (RAHB) are intramolecular contacts that are characterised by being particularly energetic. This fact is often attributed to the delocalisation of π electrons in the system. In the present article, we assess this thesis via the examination of the effect of electron-withdrawing and electron-donating groups, namely -F, -Cl, -Br, -CF3, -N(CH3)2, -OCH3, -NHCOCH3 on the strength of the RAHB in malondialdehyde by using the Quantum Theory of Atoms in Molecules (QTAIM) and the Interacting Quantum Atoms (IQA) analyses. We show that the influence of the investigated substituents on the strength of the investigated RAHBs depends largely on its position within the π skeleton. We also examine the relationship between the formation energy of the RAHB and the hydrogen bond interaction energy as defined by the IQA method of wave function analysis. We demonstrate that these substituents can have different effects on the formation and interaction energies, casting doubts regarding the use of different parameters as indicators of the RAHB formation energies. Finally, we also demonstrate how the energy density can offer an estimation of the IQA interaction energy, and therefore of the HB strength, at a reduced computational cost for these important interactions. We expected that the results reported herein will provide a valuable understanding in the assessment of the energetics of RAHB and other intramolecular interactions.

2.
J Chem Phys ; 154(10): 104307, 2021 Mar 14.
Artículo en Inglés | MEDLINE | ID: mdl-33722007

RESUMEN

Oxygen in its elemental form shows a variety of magnetic properties in its condensed phases; in particular, the epsilon solid phase loses its magnetism. These phenomena reflect the nature of the intermolecular forces present in the solid and the changes that arise with variations in pressure and temperature. In this study, we use intermolecular potentials obtained with unrestricted ab initio methods to model the singlet state of the oxygen tetramer [(O2)4], which is the unit cell, consistent with the non-magnetic character of this phase. To do this, we perform an analysis of the coupled-uncoupled representations of the spin operator together with a pairwise approximation and the Heisenberg Hamiltonian. We start from unrestricted potentials for the dimer calculated at a high level as well as different density functional theory (DFT) functionals and then apply a finite model to predict the properties of the epsilon phase. The results obtained in this way reproduce well the experimental data in the entire pressure range below 60 GPa. Additionally, we show the importance of calculating the singlet state of the tetramer as opposed to previous DFT periodic calculations, where the unrestricted description leads to a mixture of spin states and a poor comparison with the experiment. This point is crucial in the recent discussion about the coexistence of two epsilon phases: one where the identity of each O2 with spin S = 1 is retained within the tetramer unit vs another at higher pressures where the tetramer behaves as a single unit with a closed-shell character.

3.
J Chem Phys ; 154(6): 064304, 2021 Feb 14.
Artículo en Inglés | MEDLINE | ID: mdl-33588556

RESUMEN

A new spin-averaged potential energy surface (PES) for non-reactive O2(Σg-3) + O2(Σg-3) collisions is presented. The potential is formulated analytically according to the nature of the principal interaction components, with the main van der Waals contribution described through the improved Lennard-Jones model. All the parameters involved in the formulation, having a physical meaning, have been modulated in restricted variation ranges, exploiting a combined analysis of experimental and ab initio reference data. The new PES is shown to be able to reproduce a wealth of different physical properties, ranging from the second virial coefficients to transport properties (shear viscosity and thermal conductivity) and rate coefficients for inelastic scattering collisions. Rate coefficients for the vibrational inelastic processes of O2, including both vibration-to-vibration (V-V) and vibration-to-translation/rotation (V-T/R) energy exchanges, were then calculated on this PES using a mixed quantum-classical method. The effective formulation of the potential and its combination with an efficient, yet accurate, nuclear dynamics treatment allowed for the determination of a large database of V-V and V-T/R energy transfer rate coefficients in a wide temperature range.

4.
J Chem Phys ; 152(18): 184304, 2020 May 14.
Artículo en Inglés | MEDLINE | ID: mdl-32414264

RESUMEN

The properties of molecular oxygen including its condensed phases continue to be of great relevance for the scientific community. The richness and complexity of its associated properties stem from the fact that it is a very stable diradical. Its open-shell nature leads to low-lying multiplets with total electronic spin S = 0, 1, 2 in the case of the dimer, (O2)2, and the accurate calculation of the intermolecular potentials represents a challenge to ab initio electronic structure methods. In this work, we present intermolecular potentials calculated at a very high level, thus competing with the most accurate restricted potentials obtained to date. This is accomplished by drawing on an analogy between the coupled and uncoupled representations of angular momentum and restricted vs unrestricted methodologies. The S = 2 state can be well represented by unrestricted calculations in which the spins of the unpaired electrons are aligned in parallel; however, for the state where they are aligned in antiparallel fashion, it would seem that the total spin is not well defined, i.e., the well-known spin contamination problem. We show that its energy corresponds to that of the S = 1 state and perform unrestricted coupled cluster calculations for these two states. Then, we obtain the S = 0 state through the Heisenberg Hamiltonian and show that this is very reliable in the well region of the potentials. We make extensive comparisons with the best restricted potentials [Bartolomei et al., Phys. Chem. Chem. Phys. 10(35), 5374-5380 (2008)] and with reliable experimental determinations, and a very good agreement is globally found.

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