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FEMS Microbiol Ecol ; 57(2): 206-16, 2006 Aug.
Artículo en Inglés | MEDLINE | ID: mdl-16867139

RESUMEN

Two methanogenic cultures were enriched from acidic peat soil using a growth medium buffered to c. pH 5. One culture, 6A, was obtained from peat after incubation with H(2)/CO(2), whereas culture NTA was derived from a 10(-4) dilution of untreated peat into a modified medium. 16S rRNA gene clone libraries from each culture contained one methanogen and two bacterial sequences. The methanogen 16S rRNA gene sequences were 99% identical with each other and belonged to the novel "R-10/Fen cluster" family of the Methanomicrobiales, whereas their mcrA sequences were 96% identical. One bacterial 16S rRNA gene sequence from culture 6A belonged to the Bacteroidetes and showed 99% identity with sequences from methanogenic enrichments from German and Russian bogs. The other sequence belonged to the Firmicutes and was identical to a thick rod-shaped citrate-utilizing organism isolated from culture 6A, the numbers of which decreased when the Ti (III) chelator was switched from citrate to nitrilotriacetate. Bacterial clones from the NTA culture clustered in the Delta- and Betaproteobacteria. Both cultures contained thin rods, presumably the methanogens, as the predominant morphotype, and represent a significant advance in characterization of the novel acidiphilic R-10 family methanogens.


Asunto(s)
Ácidos/farmacología , Bacterias/metabolismo , Euryarchaeota/metabolismo , Metano/biosíntesis , Naranja de Acridina , Antibacterianos/farmacología , Bacterias/clasificación , Bacterias/efectos de los fármacos , Bacterias/crecimiento & desarrollo , Bacterias/aislamiento & purificación , Bacteroidetes , Betaproteobacteria , Medios de Cultivo/química , ADN de Archaea/química , ADN de Archaea/genética , ADN Bacteriano/química , ADN Bacteriano/genética , ADN Ribosómico/química , ADN Ribosómico/genética , Deltaproteobacteria , Euryarchaeota/clasificación , Euryarchaeota/efectos de los fármacos , Concentración de Iones de Hidrógeno , Methanomicrobiales , Microscopía Fluorescente , Microscopía de Interferencia , Microscopía de Contraste de Fase , New York , Filogenia , ARN Ribosómico 16S/genética , Análisis de Secuencia de ADN , Microbiología del Suelo , Coloración y Etiquetado
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