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Biomass is an important indicator of the ability of tropical forests to deliver ecosystem services, but little attention has been given to belowground biomass and its drivers in human-modified landscapes. Here, we investigated the belowground biomass and nutrient concentration/stocks (C, P, and N) across regenerating forest stands with varying ages (10-76 years old) and old-growth forests in the Caatinga dry forest (northeastern Brazil) in the context of slash-and-burn agriculture. Belowground biomass ranged from 1.89 ± 0.33 Mg ha-1 to 17.53 ± 2.28 Mg ha-1 (mean ± SE) across regenerating forest stands and averaged 8.33 ± 1.59 Mg ha-1, with no differences compared to old-growth stands. However, regenerating stands exhibited a higher root/shoot ratio with biomass concentrated in the superficial soil layer and in large-sized roots, regardless of the successional stage. Root nutrient concentration and stocks were highly variable across forest stands with fine roots supporting a higher concentration of N and P, while regenerating stands supported lower nutrient stocks as compared to old-growth forests. Finally, precipitation and chronic disturbance emerged as the most important drivers of belowground biomass and nutrient concentrations/stocks, while aboveground biomass played a negligible role. Our results indicate that, in human-modified landscapes of tropical dry forests, belowground biomass and nutrients play important roles in ecosystem functions in regenerated forests after slash-and-burn agriculture. Forest resilience and provision of ecosystem services (e.g., nutrient cycling) appear to be very sensitive to increased aridity and exploitation of forest resources.

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Pollination is a key ecosystem service of critical importance for food production. However, globally, several regions are already experiencing pollinator shortage as pollinators are declining. Here, we investigate the origin, pollinator dependence and economic value of 199 food crops cultivated in Brazil to understand to which extent (1) Brazilian agriculture is vulnerable to pollinator shortage, and (2) Brazilian society has already achieved a comprehensive perspective about crop dependence. We used Brazil as a case study as it is a megadiverse tropical country and the 3rd largest world crop producer and exporter, with most of the crops depending on pollinators. Our findings revealed that over half (53.7%) of the food crops in Brazil are native, with the North region of Brazil housing the higher diversity of native crops, in contrast with the South and Southeast regions. Additionally, considering the reproductive systems, among native food crops, 65.6% exhibit self-incompatibility or dioecy (i.e., requiring obligatory cross-pollination), whereas 30.6% of exotic food crops display this trait. Overall, Brazilian municipalities produce more exotic crops than native ones, with almost 4/5 of the total agricultural area of the country dedicated to the cultivation of exotic crops, which are generally self-compatible commodities that rely low to modestly on pollinators. Regarding the biomes, we observe that this pattern is followed by most of them, but for the Caatinga dry forest, where native crops dependent on pollinators predominate. However, when soybean is removed from the analysis, the areas devoted to exotic crops always decreased, even being equal to native crops in the Atlantic forest. Our results also indicate that considering the pollinator shortage, some Brazilian biomes may be at risk of losing >20% of their yields, mainly in the Caatinga dry forest and the Atlantic forest. Therefore, in this paper, we are discussing that the expansion of monocultures in Brazil's agricultural lands may have several impacts on the provision of pollination services, food production and, then, on food security not only for the Brazilian population, as Brazil is the 3rd largest world agricultural producer and exporter.

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Drastic changes in vegetation structure caused by exceeding ecological thresholds have fueled the interest in tropical forest responses to climate and land-use changes. Here, we examine the potential successional trajectories experienced by the largest dry tropical forest region in South America, driven by climate conditions and human disturbance. We built potential distribution models for vertebrate taxa associated with forest or shrub habitats to estimate natural vegetation cover. Distribution patterns were compared to current vegetation across the entire region to identify distinct forest degradation levels. Our results indicate the region has climatic and soil conditions suitable for more forest cover than is currently found, even in some areas with limited precipitation. However, 11.04% of natural cover persists across such an immense region, with only 4.34% consisting of forest cover. Forest degradation is characterized by the dramatic expansion of shrubland (390%), farming, and non-vegetation cover due to changes in land-use, rather than climatic conditions. Although different climate conditions have been the principal drivers for natural forest distribution in the region, the forest seems unable to resist the consequences of land-use changes, particularly in lower precipitation areas. Therefore, land-use change has exceeded the ecological thresholds for the persistence of forests, while climate change may exacerbate vegetation-type transitions.

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Abandonment of agricultural lands promotes the global expansion of secondary forests, which are critical for preserving biodiversity and ecosystem functions and services. Such roles largely depend, however, on two essential successional attributes, trajectory and recovery rate, which are expected to depend on landscape-scale forest cover in nonlinear ways. Using a multi-scale approach and a large vegetation dataset (843 plots, 3511 tree species) from 22 secondary forest chronosequences distributed across the Neotropics, we show that successional trajectories of woody plant species richness, stem density and basal area are less predictable in landscapes (4 km radius) with intermediate (40-60%) forest cover than in landscapes with high (greater than 60%) forest cover. This supports theory suggesting that high spatial and environmental heterogeneity in intermediately deforested landscapes can increase the variation of key ecological factors for forest recovery (e.g. seed dispersal and seedling recruitment), increasing the uncertainty of successional trajectories. Regarding the recovery rate, only species richness is positively related to forest cover in relatively small (1 km radius) landscapes. These findings highlight the importance of using a spatially explicit landscape approach in restoration initiatives and suggest that these initiatives can be more effective in more forested landscapes, especially if implemented across spatial extents of 1-4 km radius.

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Flowering plant species and their nectar-feeding vertebrates exemplify some of the most remarkable biotic interactions in the Neotropics. In the Brazilian Atlantic Forest, several species of birds (especially hummingbirds), bats, and non-flying mammals, as well as one lizard feed on nectar, often act as pollinators and contribute to seed output of flowering plants. We present a dataset containing information on flowering plants visited by nectar-feeding vertebrates and sampled at 166 localities in the Brazilian Atlantic Forest. This dataset provides information on 1902 unique interactions among 515 species of flowering plants and 129 species of potential vertebrate pollinators and the patterns of species diversity across latitudes. All plant-vertebrate interactions compiled were recorded through direct observations of visits, and no inferences of pollinators based on floral syndromes were included. We also provide information on the most common plant traits used to understand the interactions between flowers and nectar-feeding vertebrates: plant growth form, corolla length, rate of nectar production per hour in bagged flowers, nectar concentration, flower color and shape, time of anthesis, presence or absence of perceptible fragrance by human, and flowering phenology as well as the plant's threat status by International Union for Conservation of Nature (IUCN) classification. For the vertebrates, status of threat by IUCN classification, body mass, bill or rostrum size are provided. Information on the frequency of visits and pollen deposition on the vertebrate's body is provided from the original source when available. The highest number of unique interactions is recorded for birds (1771) followed by bats (110). For plants, Bromeliaceae contains the highest number of unique interactions (606), followed by Fabaceae (242) and Gesneriaceae (104). It is evident that there was geographical bias of the studies throughout the southeast of the Brazilian Atlantic Forest and that most effort was directed to flower-hummingbird interactions. However, it reflects a worldwide tendency of more plants interacting with birds compared with other vertebrate species. The lack of similar protocols among studies to collect basic data limits the comparisons among areas and generalizations. Nevertheless, this dataset represents a notable effort to organize and highlight the importance of vertebrate pollinators in this hotspot of biodiversity on Earth and represents the data currently available. No copyright or proprietary restrictions are associated with the use of this data set. Please cite this data paper when the data are used in publications or scientific events.

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Banks-Leite et al. (2021) claim that our suggestion of preserving ≥ 40% forest cover lacks evidence and can be problematic. We find these claims unfounded, and discuss why conservation planning urgently requires valuable, well-supported and feasible general guidelines like the 40% criterion. Using region-specific thresholds worldwide is unfeasible and potentially harmful.

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Urbanization has rapidly increased in recent decades and the negative effects on biodiversity have been widely reported. Urban green areas can contribute to improving human well-being, maintaining biodiversity, and ecosystem services (e.g. pollination). Here we examine the evolution of studies on plant-pollinator interactions in urban ecosystems worldwide, reviewing also research funding and policy actions. We documented a significant increase in the scientific production on the theme in recent years, especially in the temperate region; tropical urban ecosystems are still neglected. Plant-pollinator interactions are threatened by urbanization in complex ways, depending on the studied group (plant or pollinator [generalist or specialist]) and landscape characteristics. Several research opportunities emerge from our review. Research funding and policy actions to pollination/pollinator in urban ecosystems are still scarce and concentrated in developed countries/temperate regions. To make urban green spaces contribute to the maintenance of biodiversity and the provision of ecosystem services, transdisciplinary approaches (ecological-social-economic-cultural) are needed.

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BACKGROUND: Biological invasion is one of the main threats to tropical biodiversity and ecosystem functioning. Prosopis juliflora (Sw) DC. (Fabales: Fabaceae: Caesalpinioideae) was introduced in the Caatinga dry forest of Northeast Brazil at early 1940s and successfully spread across the region. As other invasive species, it may benefit from the soils and seed dispersal by livestock. Here we examine how seed dispersal ecology and soil conditions collectively affect seed germination, early seedling performance and consequently the P. juliflora invasive potential. METHODS: Seed germination, early seedling survival, life expectancy and soil attributes were examined in 10 plots located across three habitats (flooding plain, alluvial terrace and plateau) into a human-modified landscape of the Caatinga dry forest (a total of 12,000 seeds). Seeds were exposed to four seed dispersal methods: deposition on the soil surface, burial in the soil, passed through cattle (Boss taurus) digestive tracts and mixed with cattle manure and passed through mule (Equus africanus asinus × Equus ferus caballus) digestive tracts and mixed with mule manure. Seeds and seedlings were monitored through a year and their performance examined with expectancy tables. RESULTS: Soils differed among habitats, particularly its nutrient availability, texture and water with finely-textured and more fertile soils in the flooding plain. Total seed germination was relatively low (14.5%), with the highest score among seeds buried in the flooding plain (47.4 ± 25.3%). Seed dispersal by cattle and mule also positively impacted seed germination. Early seedling survival rate of P. juliflora was dramatically reduced with few seedlings still alive elapsed a year. Survival rate was highest in the first 30 days and declined between 30 and 60 days with stabilization at 70 days after germination in all seed treatments and habitats. However, survival and life expectancy were higher in the flooding plain at 75 days and lower in the plateau. Prosopis juliflora seedling survival and life expectancy were higher in the case seeds were mixed with cattle manure. SYNTHESIS: Prosopis juliflora seeds and seedlings are sensitive to water stress and habitat desiccation. Therefore, they benefit from the humid soils often present across human-disturbed flooding plains. This plant also benefits from seed deposition/dispersal by livestock in these landscapes, since cattle manure represents a nutrient-rich and humid substrate for both seeds and seedlings. The quality of the seed dispersal service varies among livestock species, but this key mutualism between exotic species is due to the arillate, hard-coated and palatable seeds. Prosopis juliflora traits allow this species to take multiple benefits from human presence and thus operating as a human commensal.

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Agriculture and development transform forest ecosystems to human-modified landscapes. Decades of research in ecology have generated myriad concepts for the appropriate management of these landscapes. Yet, these concepts are often contradictory and apply at different spatial scales, making the design of biodiversity-friendly landscapes challenging. Here, we combine concepts with empirical support to design optimal landscape scenarios for forest-dwelling species. The supported concepts indicate that appropriately sized landscapes should contain ≥ 40% forest cover, although higher percentages are likely needed in the tropics. Forest cover should be configured with c. 10% in a very large forest patch, and the remaining 30% in many evenly dispersed smaller patches and semi-natural treed elements (e.g. vegetation corridors). Importantly, the patches should be embedded in a high-quality matrix. The proposed landscape scenarios represent an optimal compromise between delivery of goods and services to humans and preserving most forest wildlife, and can therefore guide forest preservation and restoration strategies.

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Anthropogenic disturbance and climate change are major threats to biodiversity persistence and functioning of many tropical ecosystems. Although increases in the intensity of anthropogenic disturbance and climate change are associated with reduced taxonomic, phylogenetic and functional diversities of several organisms, little is known about how such pressures interfere with the distribution of plant reproductive traits in seasonally dry tropical forests. Here we test the hypothesis that individual and combined effects of increasing chronic anthropogenic disturbance and water deficit negatively affect the richness, abundance and diversity of specialized reproductive strategies of native woody plants in the Caatinga dry forest. This study was carried out at the Catimbau National Park, northeastern Brazil (62,294 ha). Chronic anthropogenic disturbance intensity was measured through different sources of disturbance (cattle/goat herbivory, wood extraction, and other people pressures). Water deficit data was obtained from hydrological maps and used as a proxy of aridity. We constructed generalized linear models and selected best-supported models for richness, abundance and functional diversity of reproductive traits. We documented that richness and abundance of plants with certain reproductive traits, regardless the specialization, can increase (in 18 out of the 49 trait categories analyzed; e.g. obligatory cross-pollination in response to increases in aridity and wood extraction), be impaired (in 20 categories; e.g. pollination by Sphingids/beetles with increase in aridity), or remain unchanged (in 21 categories; e.g. pollination by vertebrates with increases in chronic anthropogenic disturbance and aridity) with higher disturbance and aridity. There were combined effects of chronic anthropogenic disturbance and aridity on the richness of plants in nine traits (e.g. pollen flowers; dioecious and self-incompatible plants). Aridity affected 40% of the reproductive traits, while chronic anthropogenic disturbance affected 35.5%. The functional diversity of reproductive traits was affected only by disturbance. Changes in plant community structure promoted by chronic anthropogenic disturbance and aridity will likely threaten plant-animal interactions, thereby compromising the functioning of communities and the persistence of biodiversity in the Caatinga.

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Global climate change alters the dynamic of natural ecosystems and directly affects species distributions, persistence and diversity. The impacts of climate change may lead to dramatic changes in biotic interactions, such as pollination and seed dispersal. Life history traits are extremely important to consider the vulnerability of a species to climate change, producing more robust models than those based primarily on species distributions. Here, we hypothesized that rising temperatures and aridity will reduce suitable habitats for the endemic flora of the Caatinga, the most diverse dry tropical forest on Earth. Specifically, species with specialized reproductive traits (e.g. vertebrate pollination, biotic dispersal, obligatory cross-pollination) should be more affected by climate change than those with generalist traits. We performed two ecological niche models (current and future) to simulate the effects of climate change on the distribution area of endemic species in relation to life-history traits. We used the MIROC-ESM and CCSM4 models for both intermediate (RCP4.5) and highest predicted (RCP8.5) GHG emission scenarios, with a resolution of 30' (~1 km2). Habitat with high occurrence probability (>80%) of endemic species will be reduced (up to ~10% for trees, ~13% for non-arboreous, 10-28% for species with any pollination/reproductive system), with the greatest reductions for species with specialized reproductive traits. In addition, the likely concentration of endemic plants in the extreme northeastern portion of the Caatinga, in more mesic areas, coincides with the currently most human-modified areas of the ecosystem, which combined with climate change will further contract suitable habitats of endemic species. In conclusion, plant species endemic to the Caatinga are highly vulnerable to even conservative scenarios of future climate change and may lose much of their climatic envelopes. New protected areas should be located in the northeastern portion of the Caatinga, which hosts a more favorable climate, but is currently exposed to escalating agricultural intensification.

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Protected areas are an important strategy to safeguard biodiversity. However, if social development is not considered, biological conservation targets may not be achieved. In this empirical study, we assess the relationship between poverty and conservation goals in dry forests within a 62,000-ha Brazilian National Park (Caatinga biome). We conducted 81 structured household interviews between January and July of 2016 to assess socioeconomic, resource management and land-use variables. We used non-parametric analysis of variance to test for differences in socioecological variables among families living inside and outside the Park and both (double dwelling). The majority of families (76%) residing inside the Park were living below the poverty line while less than 14% in outside and double dwelling residences faced the same issue. Families living inside the park had lower socioeconomic conditions such as limited water availability, poor house infrastructure, low income, and high dependence on firewood than outside and double dwelling families. They were also more dependent on external financial support and natural resources. We found that failures in protected areas inception and implementation have driven people towards a mutually reinforcing and declining situation in which negative socioeconomic outcomes are associated with nature degradation. Therefore, our results suggest that the future of dry forests, characterized worldwide by the presence of low-income populations, will be largely dependent on conservation strategies that address poverty alleviation and human well-being.

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Distinct approaches have been adopted for tropical forest restoration in the last decades. The long-term viability of these restored forests and their capacity to provide the required services demand continuous evaluation to guide future initiatives. In addition, the resilience and maintenance of plant and animals communities in restored forests in tropical regions are closely related to the recovery of animal-mediated interactions. We provide, in this article, raw data related to the reproductive ecology of Inga vera, one of the most common tree species used in forest restoration initiatives in the Brazilian northeastern Atlantic forest. Specifically, we explore data on phenology, nectar dynamics and reproductive success of I. vera in natural and planted (monospecific) populations. This data article is related to the research article "Pollination partial recovery across monospecific plantations of a native tree (Inga vera, Leguminosae) in the Atlantic forest: lessons for restoration" (Cruz-Neto et al., 2018) [1].

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Old-growth tropical forests are being extensively deforested and fragmented worldwide. Yet forest recovery through succession has led to an expansion of secondary forests in human-modified tropical landscapes (HMTLs). Secondary forests thus emerge as a potential repository for tropical biodiversity, and also as a source of essential ecosystem functions and services in HMTLs. Such critical roles are controversial, however, as they depend on successional, landscape and socio-economic dynamics, which can vary widely within and across landscapes and regions. Understanding the main drivers of successional pathways of disturbed tropical forests is critically needed for improving management, conservation, and restoration strategies. Here, we combine emerging knowledge from tropical forest succession, forest fragmentation and landscape ecology research to identify the main driving forces shaping successional pathways at different spatial scales. We also explore causal connections between land-use dynamics and the level of predictability of successional pathways, and examine potential implications of such connections to determine the importance of secondary forests for biodiversity conservation in HMTLs. We show that secondary succession (SS) in tropical landscapes is a multifactorial phenomenon affected by a myriad of forces operating at multiple spatio-temporal scales. SS is relatively fast and more predictable in recently modified landscapes and where well-preserved biodiversity-rich native forests are still present in the landscape. Yet the increasing variation in landscape spatial configuration and matrix heterogeneity in landscapes with intermediate levels of disturbance increases the uncertainty of successional pathways. In landscapes that have suffered extensive and intensive human disturbances, however, succession can be slow or arrested, with impoverished assemblages and reduced potential to deliver ecosystem functions and services. We conclude that: (i) succession must be examined using more comprehensive explanatory models, providing information about the forces affecting not only the presence but also the persistence of species and ecological groups, particularly of those taxa expected to be extirpated from HMTLs; (ii) SS research should integrate new aspects from forest fragmentation and landscape ecology research to address accurately the potential of secondary forests to serve as biodiversity repositories; and (iii) secondary forest stands, as a dynamic component of HMTLs, must be incorporated as key elements of conservation planning; i.e. secondary forest stands must be actively managed (e.g. using assisted forest restoration) according to conservation goals at broad spatial scales.

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Tropical forests are being exposed to increasing levels of habitat loss and fragmentation, threatening the maintenance of global biodiversity. However, the effect that land-use change may have on the spatial dissimilarities in taxonomic and functional composition of remaining assemblages (i.e., taxonomic/functional ß-diversity) remains poorly understood. We examined a large vegetation database from an old and severely fragmented Atlantic forest landscape to test two alternative hypotheses: (1) tree assemblages experience a taxonomic and functional homogenization (reduced ß-diversity) between forest fragments and along forest edges, or alternatively, (2) these edge-affected forests show increased taxonomic and functional differentiation (increased ß-diversity) when compared to forest interior (reference) stands. Taxonomic and functional ß-diversity were examined via novel abundance-based metrics and considering functional traits related to plant dispersion, recruitment, and growth. Overall, taxonomic ß-diversity among fragments was significantly higher than among edge and reference plots. Edge plots also showed higher ß-diversity than reference plots, but only when considering dominant species. In functional terms, ß-diversity among reference plots was also lower than among forest fragments and among edge plots. These patterns support the landscape-divergence hypothesis, which postulates that variable human disturbances among forest fragments and along forest edges can lead to contrasting trajectories of vegetation changes, thus increasing the compositional and functional differentiation of tree communities in these emerging environments. Our results also show that such differentiation can preserve landscape-wide biodiversity, thus overriding negative effects of habitat fragmentation on local (α) diversity. Therefore, our findings demonstrate that forest fragments and forest edges can be more valuable for maintaining species diversity and ecosystem function in fragmented tropical landscapes than previously thought.

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Impacts of habitat loss and fragmentation on specialist herbivores have been rarely addressed. Here we examine the structure of plant and galling insect assemblages in a fragmented landscape of the Atlantic forest to verify a potential impoverishment of these assemblages mediated by edge effects. Saplings and galling insects were recorded once within a 0.1-ha area at habitat level, covering forest interior stands, forest edges, and small fragments. A total of 1,769 saplings from 219 tree species were recorded across all three habitats, with differences in terms of sapling abundance and species richness. Additionally, edge-affected habitats exhibited reduced richness of both host-plant and galling insects at plot and habitat spatial scale. Attack levels also differed among forest types at habitat spatial scale (21.1% of attacked stems in forest interior, 12.4% in small fragments but only 8.5% in forest edges). Plot ordination resulted in three clearly segregated clusters: one formed by forest interior, one by small fragments, and another formed by edge plots. Finally, the indicator species analysis identified seven and one indicator plant species in forest interior and edge-affected habitats, respectively. Consequently, edge effects lead to formation of distinct taxonomic groups and also an impoverished assemblage of plants and galling insects at multiple spatial scales. The results of the present study indicate that fragmentation-related changes in plant assemblages can have a cascade effects on specialist herbivores. Accordingly, hyperfragmented landscapes may not be able to retain an expressive portion of tropical biodiversity.

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Chronic disturbances, such as selective logging, firewood extraction and extensive grazing, may lead to the taxonomic and phylogenetic impoverishment of remaining old-growth forest communities worldwide; however, the empirical evidence on this topic is limited. We tested this hypothesis in the Caatinga vegetation--a seasonally dry tropical forest restricted to northeast Brazil. We sampled 11,653 individuals (adults, saplings, and seedlings) from 51 species in 29 plots distributed along a gradient of chronic disturbance. The gradient was assessed using a chronic disturbance index (CDI) based on five recognized indicators of chronic disturbances: proximity to urban center, houses and roads and the density of both people and livestock. We used linear models to test if mean effective number of lineages, mean phylogenetic distance and phylogenetic dispersion decreased with CDI and if such relationships differed among ontogenetic stages. As expected, the mean effective number of lineages and the mean phylogenetic distance were negatively related to CDI, and such diversity losses occurred irrespective of ontogeny. Yet the increase in phylogenetic clustering in more disturbed plots was only evident in seedlings and saplings, mostly because clades with more descendent taxa than expected by chance (e.g., Euphorbiaceae) thrived in more disturbed plots. This novel study indicates that chronic human disturbances are promoting the phylogenetic impoverishment of the irreplaceable woody flora of the Brazilian Caatinga forest. The highest impoverishment was observed in seedlings and saplings, indicating that if current chronic disturbances remain, they will result in increasingly poorer phylogenetically forests. This loss of evolutionary history will potentially limit the capacity of this ecosystem to respond to human disturbances (i.e., lower ecological resilience) and particularly their ability to adapt to rapid climatic changes in the region.

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We examine the effects of forest fragmentation on the structure and composition of tree assemblages within three seasonal and aseasonal forest types of southern Brazil, including evergreen, Araucaria, and deciduous forests. We sampled three southernmost Atlantic Forest landscapes, including the largest continuous forest protected areas within each forest type. Tree assemblages in each forest type were sampled within 10 plots of 0.1 ha in both continuous forests and 10 adjacent forest fragments. All trees within each plot were assigned to trait categories describing their regeneration strategy, vertical stratification, seed-dispersal mode, seed size, and wood density. We detected differences among both forest types and landscape contexts in terms of overall tree species richness, and the density and species richness of different functional groups in terms of regeneration strategy, seed dispersal mode and woody density. Overall, evergreen forest fragments exhibited the largest deviations from continuous forest plots in assemblage structure. Evergreen, Araucaria and deciduous forests diverge in the functional composition of tree floras, particularly in relation to regeneration strategy and stress tolerance. By supporting a more diversified light-demanding and stress-tolerant flora with reduced richness and abundance of shade-tolerant, old-growth species, both deciduous and Araucaria forest tree assemblages are more intrinsically resilient to contemporary human-disturbances, including fragmentation-induced edge effects, in terms of species erosion and functional shifts. We suggest that these intrinsic differences in the direction and magnitude of responses to changes in landscape structure between forest types should guide a wide range of conservation strategies in restoring fragmented tropical forest landscapes worldwide.

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Amazonian rainforests sustain some of the richest tree communities on Earth, but their ecological and evolutionary responses to human threats remain poorly known. We used one of the largest experimental datasets currently available on tree dynamics in fragmented tropical forests and a recent phylogeny of angiosperms to test whether tree communities have lost phylogenetic diversity since their isolation about two decades previously. Our findings revealed an overall trend toward phylogenetic impoverishment across the experimentally fragmented landscape, irrespective of whether tree communities were in 1-ha, 10-ha, or 100-ha forest fragments, near forest edges, or in continuous forest. The magnitude of the phylogenetic diversity loss was low (<2% relative to before-fragmentation values) but widespread throughout the study landscape, occurring in 32 of 40 1-ha plots. Consistent with this loss in phylogenetic diversity, we observed a significant decrease of 50% in phylogenetic dispersion since forest isolation, irrespective of plot location. Analyses based on tree genera that have significantly increased (28 genera) or declined (31 genera) in abundance and basal area in the landscape revealed that increasing genera are more phylogenetically related than decreasing ones. Also, the loss of phylogenetic diversity was greater in tree communities where increasing genera proliferated and decreasing genera reduced their importance values, suggesting that this taxonomic replacement is partially underlying the phylogenetic impoverishment at the landscape scale. This finding has clear implications for the current debate about the role human-modified landscapes play in sustaining biodiversity persistence and key ecosystem services, such as carbon storage. Although the generalization of our findings to other fragmented tropical forests is uncertain, it could negatively affect ecosystem productivity and stability and have broader impacts on coevolved organisms.

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The Brazilian Atlantic Forest hosts one of the world's most diverse and threatened tropical forest biota. In many ways, its history of degradation describes the fate experienced by tropical forests around the world. After five centuries of human expansion, most Atlantic Forest landscapes are archipelagos of small forest fragments surrounded by open-habitat matrices. This 'natural laboratory' has contributed to a better understanding of the evolutionary history and ecology of tropical forests and to determining the extent to which this irreplaceable biota is susceptible to major human disturbances. We share some of the major findings with respect to the responses of tropical forests to human disturbances across multiple biological levels and spatial scales and discuss some of the conservation initiatives adopted in the past decade. First, we provide a short description of the Atlantic Forest biota and its historical degradation. Secondly, we offer conceptual models describing major shifts experienced by tree assemblages at local scales and discuss landscape ecological processes that can help to maintain this biota at larger scales. We also examine potential plant responses to climate change. Finally, we propose a research agenda to improve the conservation value of human-modified landscapes and safeguard the biological heritage of tropical forests.

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