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1.
BMJ Open ; 14(9): e086480, 2024 Sep 05.
Artículo en Inglés | MEDLINE | ID: mdl-39242159

RESUMEN

OBJECTIVE: This study examined the prevalence, severity and risk factors of anaemia among adult people living with HIV attending an antiretroviral therapy centre in Woreta Primary Hospital, Woreta town, Ethiopia. DESIGN: Hospital-based retrospective cross-sectional study. SETTING: Public health facility that provides HIV care in Woreta town. PARTICIPANTS: A total of 289 medical records of adults living with HIV/AIDS on highly active antiretroviral therapy from February 2019 to September 2023 at government hospital were reviewed using a systematic sampling method. The data were entered using Epi-info V.7 and exported to SPSS V.23 for data analysis. The data were analysed using bivariate and then multivariate logistic regression models in order to identify variables associated with anaemia. At the 95% CI level, variables having a p value of <0.05 were deemed to be statistically significant predictors. PRIMARY OUTCOME: Prevalence and severity of anaemia and its predictors among adult patients living with HIV on antiretroviral therapy in Woreta Primary Hospital. RESULTS: The total prevalence of anaemia was 31.5% (95% CI 28.9 to 33.8). The prevalence of mild, moderate and severe anaemia was 20.42%, 10.38% and 0.70%, respectively. Predictors independently linked with anaemia were female sex (adjusted OR (AOR) 1.08), age ≥40 years (AOR 1.21), lived with HIV >10 years (AOR 2.31), CD4 counts <200 cells/µL (AOR 3.81), non-suppressed viral load (AOR 1.28), history of opportunistic infections (AOR 1.54), WHO clinical stages III and IV (AOR 1.37 and 2.23, respectively) and history of parasitic infestation (AOR 2.81). CONCLUSIONS: A sizeable proportion of participants were found anaemic. Female sex, older age, longer periods lived with the virus, lower CD4 count, non-suppressed viral load, history of opportunistic infections, WHO clinical stages III and IV and history of parasitic infestation were the contributing factors. Therefore, to improve the anaemic status and living circumstances of patients living with HIV, immediate action on the linked factors is needed, such as monitoring for maintenance of CD4 counts >200 cells/µL and avoiding progression of HIV to the advanced WHO clinical stages, suppressed viral load, preventing opportunistic infections and parasitic infestation.


Asunto(s)
Anemia , Terapia Antirretroviral Altamente Activa , Infecciones por VIH , Compuestos Heterocíclicos con 3 Anillos , Oxazinas , Piridonas , Humanos , Femenino , Masculino , Adulto , Estudios Transversales , Estudios Retrospectivos , Anemia/epidemiología , Etiopía/epidemiología , Infecciones por VIH/tratamiento farmacológico , Infecciones por VIH/epidemiología , Prevalencia , Persona de Mediana Edad , Factores de Riesgo , Piridonas/uso terapéutico , Compuestos Heterocíclicos con 3 Anillos/uso terapéutico , Recuento de Linfocito CD4 , Adulto Joven , Inhibidores de Integrasa VIH/uso terapéutico , Índice de Severidad de la Enfermedad , Piperazinas
2.
Protein Sci ; 33(10): e5171, 2024 Oct.
Artículo en Inglés | MEDLINE | ID: mdl-39276020

RESUMEN

Human epidermal growth factor receptors (HER)-also known as EGFR or ErbB receptors-are a subfamily of receptor tyrosine kinases (RTKs) that play crucial roles in cell growth, division, and differentiation. HER4 (ErbB4) is the least studied member of this family, partly because its expression is lower in later stages of development. Recent work has suggested that HER4 can play a role in metastasis by regulating cell migration and invasiveness; however, unlike EGFR and HER2, the precise role that HER4 plays in tumorigenesis is still unresolved. Early work on HER family proteins suggested that there are direct interactions between the four members, but to date, there has been no single study of all four receptors in the same cell line with the same biophysical method. Here, we quantitatively measure the degree of association between HER4 and the other HER family proteins in live cells with a time-resolved fluorescence technique called pulsed interleaved excitation fluorescence cross-correlation spectroscopy (PIE-FCCS). PIE-FCCS is sensitive to the oligomerization state of membrane proteins in live cells, while simultaneously measuring single-cell protein expression levels and diffusion coefficients. Our PIE-FCCS results demonstrate that HER4 interacts directly with all HER family members in the cell plasma membrane. The interaction between HER4 and other HER family members intensified in the presence of a HER4-specific ligand. Our work suggests that HER4 is a preferred dimerization partner for all HER family proteins, even in the absence of ligands.


Asunto(s)
Receptores ErbB , Multimerización de Proteína , Receptor ErbB-4 , Receptor ErbB-4/metabolismo , Receptor ErbB-4/química , Receptor ErbB-4/genética , Humanos , Receptores ErbB/metabolismo , Receptores ErbB/química , Receptores ErbB/genética , Espectrometría de Fluorescencia
5.
bioRxiv ; 2024 May 04.
Artículo en Inglés | MEDLINE | ID: mdl-38746348

RESUMEN

Receptor tyrosine kinases (RTKs) regulate many cellular functions and are important targets in pharmaceutical development, particularly in cancer treatment. EGFR and EphA2 are two key RTKs that are associated with oncogenic phenotypes. Several studies have reported functional interplay between these receptors, but the mechanism of interaction is still unresolved. Here we utilize a time-resolved fluorescence spectroscopy called PIE-FCCS to resolve EGFR and EphA2 interactions in live cells. We tested the role of ligands and found that EGF, but not ephrin A1 (EA1), stimulated hetero-multimerization between the receptors. To determine the effect of anionic lipids, we targeted phospholipase C (PLC) activity to alter the abundance of phosphatidylinositol (4,5)-bisphosphate (PIP 2 ). We found that higher PIP 2 levels increased homo-multimerization of both EGFR and EphA2, as well as hetero-multimerization. This study provides a direct characterization of EGFR and EphA2 interactions in live cells and shows that PIP 2 can have a substantial effect on the spatial organization of RTKs.

6.
Proc Natl Acad Sci U S A ; 121(17): e2314450121, 2024 Apr 23.
Artículo en Inglés | MEDLINE | ID: mdl-38621133

RESUMEN

Proteinaceous brain inclusions, neuroinflammation, and vascular dysfunction are common pathologies in Alzheimer's disease (AD). Vascular deficits include a compromised blood-brain barrier, which can lead to extravasation of blood proteins like fibrinogen into the brain. Fibrinogen's interaction with the amyloid-beta (Aß) peptide is known to worsen thrombotic and cerebrovascular pathways in AD. Lecanemab, an FDA-approved antibody therapy for AD, clears Aß plaque from the brain and slows cognitive decline. Here, we show that lecanemab blocks fibrinogen's binding to Aß protofibrils, preventing Aß/fibrinogen-mediated delayed fibrinolysis and clot abnormalities in vitro and in human plasma. Additionally, we show that lecanemab dissociates the Aß/fibrinogen complex and prevents fibrinogen from exacerbating Aß-induced synaptotoxicity in mouse organotypic hippocampal cultures. These findings reveal a possible protective mechanism by which lecanemab may slow disease progression in AD.


Asunto(s)
Enfermedad de Alzheimer , Anticuerpos Monoclonales Humanizados , Trombosis , Ratones , Humanos , Animales , Fibrinógeno/metabolismo , Sistemas Microfisiológicos , Enfermedad de Alzheimer/metabolismo , Péptidos beta-Amiloides/toxicidad , Péptidos beta-Amiloides/metabolismo
7.
Biol Futur ; 75(2): 251-257, 2024 Jun.
Artículo en Inglés | MEDLINE | ID: mdl-38578587

RESUMEN

Arbuscular mycorrhizal fungi (AMF) have been known to enhance plant growth and nutrient uptake. In this study, we investigated the effects of Funneliformis mosseae, Rhizophagus intraradices, and their co-inoculation on the growth and biochemical composition of tomato (Solanum lycopersicum L.) plants. The findings demonstrated that the inoculation of AMF significantly enhanced shoot and root length, shoot and root dry weight, number of fruits per plant, as well as concentrations of anthocyanin, phenolic compounds, and antioxidants in tomato plants. Both individual and co-inoculation of AMF also significantly increased nitrogen, phosphorus, and potassium concentrations in tomato plants. Our findings suggest that AMF can be used as a potential biofertilizer to enhance the growth and biochemical composition of tomato plants.


Asunto(s)
Micorrizas , Solanum lycopersicum , Solanum lycopersicum/microbiología , Solanum lycopersicum/metabolismo , Solanum lycopersicum/crecimiento & desarrollo , Micorrizas/fisiología
8.
Environ Monit Assess ; 196(5): 441, 2024 Apr 10.
Artículo en Inglés | MEDLINE | ID: mdl-38598137

RESUMEN

Since treelines are generally fire-free, the trees growing there are expected to have thin bark, unless adaptation to other factors than fire results in the selection of a thick bark. Related to this is also higher proportional investment in inner bark in such an environment of infrequent fire. This study has considered stem bark thickness both in absolute and relative terms and also in the frame of the composition of outer and inner bark components of 20 tree species along an elevation transect (2100-3300 m) in high ranges of the Central Himalaya leading to treelines. The study species varied from 2.1 to 16.2 mm for total bark thickness and from 1.2 to 18.85% for relative bark thickness. The average absolute total bark thickness across the tree species decreased with elevation from forest to treeline, both when trees of all diameters (10.2 ± 0.84 mm for forest and 6.9 ± 1.79 mm for treeline) and those of the same stem diameter range (18-20 m) were compared (9.10 ± 1.30 mm for forest species and 6.38 ± 1.31 mm for treeline species). Nevertheless, the treeline bark thickness was similar to those of several forest communities considered to have comparatively thick bark. Like many other biological structures, bark carries out multiple functions; therefore, its thickness could be affected by more than one environmental factor. We suggest that the requirement of mechanical resistance to the snowfall, rainstorms, wind and adaptation to a high sunlight and UV radiations or storage of water, and non-structural carbohydrates could affect total, outer and inner bark thickness. Studies on these aspects in similar ecosystems may help understand the multi-functional attributes of the bark. For trees of comparable sizes (trees with 18-20 cm diameter at breast height) treeline species also had lower relative bark thickness (< 6%) than trees of forest below it (> 7%). The median proportion of inner bark of the total bark (70.5%) for our 20 species was more than that for savannas (~ 50%), exposed to frequent fire regime and similar to those of in cool sclerophyllous forests and temperate rain forests where fire return time is > 100 years. However, it was lower than the inner bark proportion reported for tropical rain forests. To conclude, in spite of a fire-free environment, the Himalayan treeline and adjoining forest species show mixed bark characters.


Asunto(s)
Ecosistema , Árboles , Himalayas , Corteza de la Planta , Monitoreo del Ambiente
9.
Clin Oral Investig ; 28(4): 242, 2024 Apr 05.
Artículo en Inglés | MEDLINE | ID: mdl-38575839

RESUMEN

OBJECTIVE: To systematically review the literature for mid-sagittal plane establishment approaches to identify the most effective method for constructing the mid-sagittal plane for the evaluation of facial asymmetry. MATERIALS AND METHODS: Six electronic databases (PubMed, Medline (via Ovid), EMBASE (via Ovid), Cochrane Library, Web of Science, and Scopus) and grey literature were searched for the studies that computed the mid-sagittal reference plane three-dimensionally, using a combination of MeSH terms and keywords. The methodological quality and the level of evidence for the included studies were analyzed using QUADAS-2 and GRADE, respectively. RESULTS: The preliminary search yielded 6746 records, of which 42 articles that met the predefined inclusion criteria were included in the final analysis. All the included articles reported the construction of the mid-sagittal reference plane (MSP) using varied methods. The risk of bias and concerns regarding the applicability of the included studies were judged to be 'low'. The level of evidence was determined to be 'low' for the effectiveness of the technique and 'moderate' for the ease of clinical applicability. CONCLUSION: Despite methodological heterogeneity, this review substantiates the comparable efficacy of cephalometric and morphometric MSP construction methods. A fully automated morphometric MSP holds promise as a viable option for routine clinical use. Nevertheless, future prospective studies with an emphasis on the impact, accuracy, and clinical applicability of MSP construction techniques in cases of facial asymmetry are required. CLINICAL RELEVANCE: The present review will assist clinicians in selecting the most suitable method for MSP construction, leading to improved treatment planning and ultimately more favorable treatment outcomes.


Asunto(s)
Asimetría Facial , Humanos , Asimetría Facial/diagnóstico por imagen , Estudios Prospectivos , Cefalometría/métodos
10.
Med Biol Eng Comput ; 62(7): 2037-2058, 2024 Jul.
Artículo en Inglés | MEDLINE | ID: mdl-38436836

RESUMEN

This paper introduces a novel approach to enhance content-based image retrieval, validated on two benchmark datasets: ISIC-2017 and ISIC-2018. These datasets comprise skin lesion images that are crucial for innovations in skin cancer diagnosis and treatment. We advocate the use of pre-trained Vision Transformer (ViT), a relatively uncharted concept in the realm of image retrieval, particularly in medical scenarios. In contrast to the traditionally employed Convolutional Neural Networks (CNNs), our findings suggest that ViT offers a more comprehensive understanding of the image context, essential in medical imaging. We further incorporate a weighted multi-loss function, delving into various losses such as triplet loss, distillation loss, contrastive loss, and cross-entropy loss. Our exploration investigates the most resilient combination of these losses to create a robust multi-loss function, thus enhancing the robustness of the learned feature space and ameliorating the precision and recall in the retrieval process. Instead of using all the loss functions, the proposed multi-loss function utilizes the combination of only cross-entropy loss, triplet loss, and distillation loss and gains improvement of 6.52% and 3.45% for mean average precision over ISIC-2017 and ISIC-2018. Another innovation in our methodology is a two-branch network strategy, which concurrently boosts image retrieval and classification. Through our experiments, we underscore the effectiveness and the pitfalls of diverse loss configurations in image retrieval. Furthermore, our approach underlines the advantages of retrieval-based classification through majority voting rather than relying solely on the classification head, leading to enhanced prediction for melanoma - the most lethal type of skin cancer. Our results surpass existing state-of-the-art techniques on the ISIC-2017 and ISIC-2018 datasets by improving mean average precision by 1.01% and 4.36% respectively, emphasizing the efficacy and promise of Vision Transformers paired with our tailor-made weighted loss function, especially in medical contexts. The proposed approach's effectiveness is substantiated through thorough ablation studies and an array of quantitative and qualitative outcomes. To promote reproducibility and support forthcoming research, our source code will be accessible on GitHub.


Asunto(s)
Redes Neurales de la Computación , Humanos , Neoplasias Cutáneas/diagnóstico por imagen , Neoplasias Cutáneas/patología , Algoritmos , Procesamiento de Imagen Asistido por Computador/métodos , Bases de Datos Factuales , Interpretación de Imagen Asistida por Computador/métodos
11.
J Med Chem ; 67(7): 5473-5501, 2024 Apr 11.
Artículo en Inglés | MEDLINE | ID: mdl-38554135

RESUMEN

Proteolysis-Targeting Chimeras (PROTACs) are bifunctional molecules that bring a target protein and an E3 ubiquitin ligase into proximity to append ubiquitin, thus directing target degradation. Although numerous PROTACs have entered clinical trials, their development remains challenging, and their large size can produce poor drug-like properties. To overcome these limitations, we have modified our Coferon platform to generate Combinatorial Ubiquitination REal-time PROteolysis (CURE-PROs). CURE-PROs are small molecule degraders designed to self-assemble through reversible bio-orthogonal linkers to form covalent heterodimers. By modifying known ligands for Cereblon, MDM2, VHL, and BRD with complementary phenylboronic acid and diol/catechol linkers, we have successfully created CURE-PROs that direct degradation of BRD4 both in vitro and in vivo. The combinatorial nature of our platform significantly reduces synthesis time and effort to identify the optimal linker length and E3 ligase partner to each target and is readily amenable to screening for new targets.


Asunto(s)
Proteínas Nucleares , Factores de Transcripción , Proteolisis , Proteínas Nucleares/metabolismo , Factores de Transcripción/metabolismo , Ubiquitinación , Ubiquitina-Proteína Ligasas/metabolismo , Ligandos
12.
Proc Natl Acad Sci U S A ; 121(14): e2304897121, 2024 Apr 02.
Artículo en Inglés | MEDLINE | ID: mdl-38547061

RESUMEN

While the existence and functional role of class C G-protein-coupled receptors (GPCR) dimers is well established, there is still a lack of consensus regarding class A and B GPCR multimerization. This lack of consensus is largely due to the inherent challenges of demonstrating the presence of multimeric receptor complexes in a physiologically relevant cellular context. The C-X-C motif chemokine receptor 4 (CXCR4) is a class A GPCR that is a promising target of anticancer therapy. Here, we investigated the potential of CXCR4 to form multimeric complexes with other GPCRs and characterized the relative size of the complexes in a live-cell environment. Using a bimolecular fluorescence complementation (BiFC) assay, we identified the ß2 adrenergic receptor (ß2AR) as an interaction partner. To investigate the molecular scale details of CXCR4-ß2AR interactions, we used a time-resolved fluorescence spectroscopy method called pulsed-interleaved excitation fluorescence cross-correlation spectroscopy (PIE-FCCS). PIE-FCCS can resolve membrane protein density, diffusion, and multimerization state in live cells at physiological expression levels. We probed CXCR4 and ß2AR homo- and heteromultimerization in model cell lines and found that CXCR4 assembles into multimeric complexes larger than dimers in MDA-MB-231 human breast cancer cells and in HCC4006 human lung cancer cells. We also found that ß2AR associates with CXCR4 multimers in MDA-MB-231 and HCC4006 cells to a higher degree than in COS-7 and CHO cells and in a ligand-dependent manner. These results suggest that CXCR4-ß2AR heteromers are present in human cancer cells and that GPCR multimerization is significantly affected by the plasma membrane environment.


Asunto(s)
Neoplasias , Receptores Adrenérgicos beta 2 , Receptores CXCR4 , Transducción de Señal , Animales , Cricetinae , Humanos , Células CHO , Cricetulus , Proteínas de la Membrana/metabolismo , Neoplasias/metabolismo , Receptores CXCR4/metabolismo , Receptores Adrenérgicos beta 2/metabolismo , Multimerización de Proteína
13.
Diagnostics (Basel) ; 14(4)2024 Feb 14.
Artículo en Inglés | MEDLINE | ID: mdl-38396462

RESUMEN

Digitalizing all aspects of dental care is a contemporary approach to ensuring the best possible clinical outcomes. Ongoing advancements in 3D face acquisition have been driven by continuous research on craniofacial structures and treatment effects. An array of 3D surface-imaging systems are currently available for generating photorealistic 3D facial images. However, choosing a purpose-specific system is challenging for clinicians due to variations in accuracy, reliability, resolution, and portability. Therefore, this review aims to provide clinicians and researchers with an overview of currently used or potential 3D surface imaging technologies and systems for 3D face acquisition in craniofacial research and daily practice. Through a comprehensive literature search, 71 articles meeting the inclusion criteria were included in the qualitative analysis, investigating the hardware, software, and operational aspects of these systems. The review offers updated information on 3D surface imaging technologies and systems to guide clinicians in selecting an optimal 3D face acquisition system. While some of these systems have already been implemented in clinical settings, others hold promise. Furthermore, driven by technological advances, novel devices will become cost-effective and portable, and will also enable accurate quantitative assessments, rapid treatment simulations, and improved outcomes.

14.
PLoS One ; 19(2): e0294533, 2024.
Artículo en Inglés | MEDLINE | ID: mdl-38394050

RESUMEN

This study attempts to characterize and interpret the groundwater quality (GWQ) using a GIS environment and multivariate statistical approach (MSA) for the Jakham River Basin (JRB) in Southern Rajasthan. In this paper, analysis of various statistical indicators such as the Water Quality Index (WQI) and multivariate statistical methods, i.e., principal component analysis and correspondence analysis (PCA and CA), were implemented on the pre and post-monsoon water quality datasets. All these methods help identify the most critical factor in controlling GWQ for potable water. In pre-monsoon (PRM) and post-monsoon (POM) seasons, the computed value of WQI has ranged between 28.28 to 116.74 and from 29.49 to 111.98, respectively. As per the GIS-based WQI findings, 63.42 percent of the groundwater samples during the PRM season and 42.02 percent during the POM were classed as 'good' and could be consumed for drinking. The Principal component analysis (PCA) is a suitable tool for simplification of the evaluation process in water quality analysis. The PCA correlation matrix defines the relation among the water quality parameters, which helps to detect the natural or anthropogenic influence on sub-surface water. The finding of PCA's factor analysis shows the impact of geological and human intervention, as increased levels of EC, TDS, Na+, Cl-, HCO3-, F-, and SO42- on potable water. In this study, hierarchical cluster analysis (HCA) was used to categories the WQ parameters for PRM and POR seasons using the Ward technique. The research outcomes of this study can be used as baseline data for GWQ development activities and protect human health from water-borne diseases in the southern region of Rajasthan.


Asunto(s)
Agua Potable , Agua Subterránea , Contaminantes Químicos del Agua , Humanos , Calidad del Agua , Monitoreo del Ambiente/métodos , Agua Potable/análisis , Contaminantes Químicos del Agua/análisis , India , Agua Subterránea/análisis
15.
Heliyon ; 10(3): e25800, 2024 Feb 15.
Artículo en Inglés | MEDLINE | ID: mdl-38356509

RESUMEN

This article explores the use of phase change materials (PCMs) derived from waste, in energy storage systems. It emphasizes the potential of these PCMs in addressing concerns related to fossil fuel usage and environmental impact. This article also highlights the aspects of these PCMs including reduced reliance on renewable resources minimized greenhouse gas emissions and waste reduction. The study also discusses approaches such as integrating nanotechnology to enhance thermal conductivity and utilizing machine learning and deep learning techniques for predicting dynamic behavior. The article provides an overall view of research on biodegradable waste-based PCMs and how they can play a promising role in achieving energy-efficient and sustainable thermal storage systems. However, specific conclusions drawn from the presented results are not explicitly outlined, leaving room, for investigation and exploration in this evolving field. Artificial neural network (ANN) predictive models for thermal energy storage devices perform differently. With a 4% adjusted mean absolute error, the Gaussian radial basis function kernel Support Vector Regression (SVR) model captured heat-related charging and discharging issues. The ANN model predicted finned tube heat and heat flux better than the numerical model. SVM models outperformed ANN and ANFIS in some datasets. Material property predictions favored gradient boosting, but Linear Regression and SVR models performed better, emphasizing application- and dataset-specific model selection. These predictive models provide insights into the complex thermal performance of building structures, aiding in the design and operation of energy-efficient systems. Biodegradable waste-based PCMs' sustainability includes carbon footprint, waste reduction, biodegradability, and circular economy alignment. Nanotechnology, machine learning, and deep learning improve thermal conductivity and prediction. Circular economy principles include waste reduction and carbon footprint reduction. Specific results-based conclusions are not stated. Presenting a comprehensive overview of current research highlights biodegradable waste-based PCMs' potential for energy-efficient and sustainable thermal storage systems.

16.
bioRxiv ; 2024 Jan 21.
Artículo en Inglés | MEDLINE | ID: mdl-38293058

RESUMEN

Proteinaceous brain inclusions, neuroinflammation, and vascular dysfunction are common pathologies in Alzheimer's disease (AD). Vascular deficits include a compromised blood-brain barrier, which can lead to extravasation of blood proteins like fibrinogen into the brain. Fibrinogen's interaction with the amyloid-beta (Aß) peptide is known to worsen thrombotic and cerebrovascular pathways in AD. Lecanemab, an FDA-approved antibody therapy for AD, shows promising results in facilitating reduction of Aß from the brain and slowing cognitive decline. Here we show that lecanemab blocks fibrinogen's binding to Aß protofibrils, normalizing Aß/fibrinogen-mediated delayed fibrinolysis and clot abnormalities in vitro and in human plasma. Additionally, we show that lecanemab dissociates the Aß/fibrinogen complex and prevents fibrinogen from exacerbating Aß-induced synaptotoxicity in mouse organotypic hippocampal cultures. These findings reveal a possible protective mechanism by which lecanemab may slow disease progression in AD.

17.
Gene ; 896: 148039, 2024 Feb 20.
Artículo en Inglés | MEDLINE | ID: mdl-38036075

RESUMEN

Wheat (Triticum aestivum L.) is a crucial global staple crop, and is consistently being improved to enhance yield, disease resistance, and quality traits. However, the development of molecular markers is a challenging task due to its hexaploid genome. Molecular marker system such as simple sequence repeat (SSR) and single nucleotide polymorphism (SNP) are helpful for breeding, but SNP has limitations due to its development cost and its conversion to breeder markers. The study proposed an in-silico approach, by utilizing the low-cost transcriptome sequencing of two parental lines, 'TAC 75' and 'WH 1105', to identify polymorphic SSRs for mapping in a recombinant inbred line (RIL) population. This study introduces a new approach to bridge wheat genetics intricacies and next-generation sequencing potential. It presents a comprehensive genome-wide SSR distribution using IWGSC CS RefSeq v2.1 genome assembly and to identify 189 polymorphic loci through in-silico strategy. Of these, 54.76% showed polymorphism between parents, surpassing the traditional low polymorphic success rate. A RIL population screening validated these markers, demonstrating the fitness of identified markers through chi-square tests. The designed SSRs were also validated for genetic diversity analysis in a subset of 37 Indian wheat genotypes and cross-transferability in the wild/relative wheat species. In diversity analysis, a subset of 38 markers revealed 95 alleles (2.5 allele/locus), indicating substantial genetic variation. Population structure analysis unveiled three distinct groups, supported by phylogenetic and PCoA analyses. Further the polymorphic SSRs were also analyzed for SSR-gene association using gene ontology analysis. By utilizing the developing seed transcriptome data within parental lines, the study has enhanced the polymorphic SSR identification precision and facilitated in the RIL population. The undertaken study pioneers the use of transcriptome sequencing and genetic mapping to overcome challenges posed by the intricate wheat genome. This approach offers a cost-effective, less labour-intensive alternative to conventional methods, providing a platform for advancing wheat breeding research.


Asunto(s)
Fitomejoramiento , Triticum , Triticum/genética , Marcadores Genéticos , Filogenia , Repeticiones de Microsatélite/genética , Polimorfismo de Nucleótido Simple , Genoma de Planta
18.
J Maxillofac Oral Surg ; 22(4): 1115-1122, 2023 Dec.
Artículo en Inglés | MEDLINE | ID: mdl-38105824

RESUMEN

Introduction: Dental implants have been used in a variety of conventional technique-based forms for many years which had its own drawbacks. With the advent of cone beam CT, proper surgical and prosthetic planning is possible now a days. To achieve ideal implant placement, good prosthetic fabrication and overall successful prognosis computer fabricated guide aided surgery have been developed. Aim and Objective: The aim of this study was to compare and evaluate the accuracy of implant placement in partially edentulous patients with conventional free hand technique and computer fabricated guide of implant placement by comparing pre- and post-CBCT data. Methods: The present split mouth study design was conducted with forty sample size on twenty randomly selected patients who were treated with bilateral partially edentulous sites requiring dental implants. Patients were treated with both conventional (free hand) technique and computer fabricated 3D guide aided technique of implant placement. Comparison of accuracy of implant placement was done by comparing the pre- and postoperative CBCT data in terms of mean coronal deviation, mean apical deviation and mean angular deviation. Results and Conclusion: The results showed that there is no statistically significant difference between mean coronal deviation, mean apical deviation and mean angular deviation of planned and placed implants in both conventional technique (free hand technique) and computer fabricated 3D guide aided implant placement technique. Hence, this study concluded that conventional technique of implant placement is equally efficient in comparison with computer fabricated guide aided surgery in terms of accuracy of implant placement.

19.
Langenbecks Arch Surg ; 409(1): 19, 2023 Dec 27.
Artículo en Inglés | MEDLINE | ID: mdl-38150073

RESUMEN

PURPOSE: NPWT has been tried in many surgical fields, including colorectal, thoracic, vascular, and non-healing wounds, for the prevention of SSI. However, its efficacy in the prevention of SSI-grade IV closed abdominal wounds is yet to be explored. METHODS: All patients with grade IV abdominal wounds were included in the study. They were randomized into the conventional arm and the VAC arm after confirming the diagnosis intra-operatively. The sheath was closed, and the skin was laid open in the postoperative period. In the VAC arm, the NPWT dressing was applied on postoperative day (POD)-1 and removed on POD-5. In the conventional arm, only regular dressing was done postoperatively. The skin was closed with a delayed primary intention on POD-5 in both arms. The sutures were removed after 7 to 10 days of skin closure. RESULTS: The rate of SSI (10% in the VAC arm vs. 37.5% in the conventional arm, p-value = 0.004) was significantly lower in the VAC arm, as were the rates of seroma formation (2.4% in the VAC arm vs. 20% in the conventional arm, p = 0.014) and wound dehiscence (7.3% vs. 30%, p = 0.011). The conventional arm had a significant delay in skin closure beyond POD5 due to an increased rate of SSI, which also led to a prolonged hospital stay (5 days in the VAC arm vs. 6.5 days in the conventional arm, p-value = 0.005). CONCLUSION: The VAC dressing can be used routinely in grade IV closed abdominal wounds to reduce the risk of SSI and wound dehiscence.


Asunto(s)
Traumatismos Abdominales , Terapia de Presión Negativa para Heridas , Humanos , Infección de la Herida Quirúrgica/prevención & control , Abdomen , Tiempo de Internación
20.
Toxics ; 11(11)2023 Nov 19.
Artículo en Inglés | MEDLINE | ID: mdl-37999592

RESUMEN

The presence of dye in wastewater causes substantial threats to the environment, and has negative impacts not only on human health but also on the health of other organisms that are part of the ecosystem. Because of the increase in textile manufacturing, the inhabitants of the area, along with other species, are subjected to the potentially hazardous consequences of wastewater discharge from textile and industrial manufacturing. Different types of dyes emanating from textile wastewater have adverse effects on the aquatic environment. Various methods including physical, chemical, and biological strategies are applied in order to reduce the amount of dye pollution in the environment. The development of economical, ecologically acceptable, and efficient strategies for treating dye-containing wastewater is necessary. It has been shown that microbial communities have significant potential for the remediation of hazardous dyes in an environmentally friendly manner. In order to improve the efficacy of dye remediation, numerous cutting-edge strategies, including those based on nanotechnology, microbial biosorbents, bioreactor technology, microbial fuel cells, and genetic engineering, have been utilized. This article addresses the latest developments in physical, chemical, eco-friendly biological and advanced strategies for the efficient mitigation of dye pollution in the environment, along with the related challenges.

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