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1.
Rev Sci Instrum ; 83(9): 094902, 2012 Sep.
Artículo en Inglés | MEDLINE | ID: mdl-23020403

RESUMEN

This paper reports one of the first experimental results on the application of ultrasound activated lock-in vibrothermography for quantitative assessment of buried flaws in complex cast parts. The use of amplitude modulated ultrasonic heat generation allowed selective response of defective areas within the part, as the defect itself is turned into a local thermal wave emitter. Quantitative evaluation of hidden damages was accomplished by estimating independently both the area and the depth extension of the buried flaws, while x-ray 3D computed tomography was used as reference for sizing accuracy assessment. To retrieve flaw's area, a simple yet effective histogram-based phase image segmentation algorithm with automatic pixels classification has been developed. A clear correlation was found between the thermal (phase) signature measured by the infrared camera on the target surface and the actual mean cross-section area of the flaw. Due to the very fast cycle time (<30 s/part), the method could potentially be applied for 100% quality control of casting components.

2.
Rapid Commun Mass Spectrom ; 20(13): 1973-80, 2006.
Artículo en Inglés | MEDLINE | ID: mdl-16755609

RESUMEN

Hydrogen/deuterium exchange, measured by electrospray ionization with orthogonal quadrupole time-of-flight mass spectrometry (ESI-Q-TOFMS) and by matrix-assisted laser desorption/ionization time-of-flight mass spectrometry (MALDI-TOFMS), was used as a means to probe and map differences in conformational flexibility between the ligand-free and ligand-bound forms of cellular retinol-binding protein type I. Labelled fragments were obtained by digestion of the protein with pepsin. The differences in space-resolved time courses of deuterium incorporation identified regions that exhibit a remarkably higher degree of flexibility in the apo-protein than in the holo-protein. These segments encompass residues that are thought, on the basis of structural homology of the retinol carrier with other members of the intracellular lipid-binding proteins family, to belong to the dynamic portal through which all-trans retinol can access its high-affinity, solvent-shielded, binding site.


Asunto(s)
Proteínas de Unión al Retinol/química , Espectrometría de Masa por Ionización de Electrospray/métodos , Espectrometría de Masa por Láser de Matriz Asistida de Ionización Desorción/métodos , Secuencia de Aminoácidos , Animales , Sitios de Unión , Deuterio/química , Hidrógeno/química , Técnicas In Vitro , Ligandos , Modelos Moleculares , Datos de Secuencia Molecular , Fragmentos de Péptidos/química , Fragmentos de Péptidos/genética , Conformación Proteica , Ratas , Proteínas de Unión al Retinol/genética , Proteínas de Unión al Retinol/metabolismo , Proteínas Celulares de Unión al Retinol
3.
Rapid Commun Mass Spectrom ; 15(22): 2186-92, 2001.
Artículo en Inglés | MEDLINE | ID: mdl-11746883

RESUMEN

Recent developments in mass spectrometry have demonstrated the capability of this technique to transfer non-covalent protein complexes, involving low and high molecular weight ligands, from a condensed state to the gas phase. In this work, electrospray mass spectrometry with a quadrupole analyzer (ES-MS) and matrix-assisted laser desorption/ionization time-of-flight mass spectrometry (MALDI-TOFMS) were used to analyze the non-covalent association between recombinant rat cellular retinol-binding protein type-I (CRBP) with its specific ligand, all-trans retinol (vitamin A), and with fatty acids. Under denaturing conditions, MALDI-TOFMS and ES-MS techniques allowed determination of the molecular weight of apo-CRBP with good accuracy (<0.01%) and to identify a protein fraction ( approximately 20%) retaining the initial methionine. By adding saturating amounts of vitamin A, ES-MS studies on the protein in the holo-form under native conditions allowed detection of retinol bound within the cavity together with water molecules, as expected from its crystal structure. ES mass spectra of CRBP in the native state were also recorded under non-denaturing conditions, with the aim to study non-covalent interactions between CRBP and non-specific ligands such as fatty acids, bound to the protein as a result of expression in various strains of E. coli grown in different media. Since ES mass spectra do not elucidate which species interact with the protein, in order to investigate the ligands possibly retained in the active site of recombinant CRBP, liquid chromatography/ES-tandem mass spectrometry was used. In particular, this technique was applied to identify and quantify fatty acids bound to CRBP. Quantitative data indicated the presence of a few fatty acids at a total concentration lower than 2% of that of the protein. Similar findings were observed for the homolog rat cellular retinol-binding protein type-II, demonstrating the high degree of purity and homogeneity of apo-CRBP preparations derived from gene expression.


Asunto(s)
Proteínas Recombinantes/química , Proteínas Recombinantes/metabolismo , Proteínas de Unión al Retinol/química , Proteínas de Unión al Retinol/metabolismo , Proteínas Bacterianas/análisis , Proteínas Bacterianas/química , Proteínas Bacterianas/metabolismo , Sitios de Unión , Escherichia coli , Ácidos Grasos/análisis , Ácidos Grasos/química , Ácidos Grasos/metabolismo , Ligandos , Peso Molecular , Desnaturalización Proteica , Proteínas Recombinantes/análisis , Proteínas de Unión al Retinol/análisis , Proteínas Celulares de Unión al Retinol , Espectrometría de Masa por Ionización de Electrospray , Vitamina A/análisis , Vitamina A/química , Vitamina A/metabolismo
4.
J Biol Chem ; 275(10): 6956-62, 2000 Mar 10.
Artículo en Inglés | MEDLINE | ID: mdl-10702257

RESUMEN

Quinonoid intermediates play a key role in the catalytic mechanism of pyridoxal 5'-phosphate-dependent enzymes. Whereas the structures of other pyridoxal 5'-phosphate-bound intermediates have been determined, the structure of a quinonoid species has not yet been reported. Here, we investigate factors controlling the accumulation and stability of quinonoids formed at the beta-active site of tryptophan synthase both in solution and the crystal. The quinonoids were obtained by reacting the alpha-aminoacrylate Schiff base with different nucleophiles, focusing mainly on the substrate analogs indoline and beta-mercaptoethanol. In solution, both monovalent cations (Cs(+) or Na(+)) and alkaline pH increase the apparent affinity of indoline and favor accumulation of the indoline quinonoid. A similar pH dependence is observed when beta-mercaptoethanol is used. As indoline and beta-mercaptoethanol exhibit very distinct ionization properties, this finding suggests that nucleophile binding and quinonoid stability are controlled by some ionizable protein residue(s). In the crystal, alkaline pH favors formation of the indoline quinonoid as in solution, but the effect of cations is markedly different. In the absence of monovalent metal ions the quinonoid species accumulates substantially, whereas in the presence of sodium ions the accumulation is modest, unless alpha-subunit ligands are also present. Alpha-subunit ligands not only favor the formation of the intermediate, but also reduce significantly its decay rate. These findings define experimental conditions suitable for the stabilization of the quinonoid species in the crystal, a critical prerequisite for the determination of the three-dimensional structure of this intermediate.


Asunto(s)
Triptófano Sintasa/química , Alanina/análogos & derivados , Alanina/química , Cristalización , Concentración de Iones de Hidrógeno , Conformación Proteica , Quinonas/química , Sodio/farmacología , beta-MSH/química
5.
Eur J Biochem ; 265(2): 549-55, 1999 Oct.
Artículo en Inglés | MEDLINE | ID: mdl-10504385

RESUMEN

This paper reports the isolation and characterization of phenol hydroxylase (PH) from a strain belonging to the Acinetobacter genus. An Acinetobacter radioresistens culture, grown on phenol as the only carbon and energy source, produced a multicomponent enzyme system, located in the cytoplasm and inducible by the substrate, that is responsible for phenol conversion into catechol. Because of the wide diffusion of phenol as a contaminant, the present work represents an initial step towards the biotechnological treatment of waste waters containing phenol. The reductase component of this PH system has been purified and isolated in large amounts as a single electrophoretic band. The protein contains a flavin cofactor (FAD) and an iron-sulfur cluster of the type [2Fe-2S]. The function of this reductase is to transfer reducing equivalents from NAD(P)H to the oxygenase component. In vitro, the electron acceptors can be cytochrome c as well as other molecules such as 2, 6-dichlorophenolindophenol, potassium ferricyanide, and Nitro Blue tetrazolium. The molecular mass of the reductase was determined to be 41 kDa by SDS/PAGE and 38.8 kDa by gel permeation; its isoelectric point is 5.8. The N-terminal sequence is similar to those of the reductases from A. calcoaceticus NCIB 8250 (10/12 identity) and Pseudomonas CF600 (8/12 identity) PHs, but much less similar (2/12 identity) to that of benzoate dioxygenase reductase from A. calcoaceticus BD413. Similarly, the internal peptide sequence of the A. radioresistens PH reductase displays a good level of identity (9/10) with both A. calcoaceticus NCIB 8250 and Pseudomonas CF600 PH reductase internal peptide sequences but a poorer similarity (3/10) to the internal peptide sequence of benzoate dioxygenase reductase from A. calcoaceticus BD413.


Asunto(s)
Acinetobacter/enzimología , Oxigenasas de Función Mixta/química , Complejos Multienzimáticos/química , Oxidorreductasas/química , Proteínas Bacterianas/química , Transporte de Electrón , Flavoproteínas/química , Concentración de Iones de Hidrógeno , Proteínas Hierro-Azufre/química , Cinética , Oxigenasas de Función Mixta/aislamiento & purificación , Complejos Multienzimáticos/aislamiento & purificación , Fragmentos de Péptidos/química , Homología de Secuencia de Aminoácido , Espectrofotometría
6.
Ergonomics ; 42(6): 880-8, 1999 Jun.
Artículo en Inglés | MEDLINE | ID: mdl-10340028

RESUMEN

A first application of a new measurement technique to detect vibration transmitted to the human body in working conditions is presented. The technique is based on the use of a laser scanning vibrometer. It was previously developed, analysed and tested using laboratory test benches with electrodynamical exciters, and comparisons with traditional measurement techniques based on accelerometers were made. First, results of tests performed using a real machine generating vibration are illustrated. The machine used is a pedestrian-controlled tractor working in a fixed position. Reference measurements by using the accelerometer have been simultaneously performed while scanning the hand surface by the laser-based measurement system. Results achieved by means of both measurement techniques have been processed, analysed, compared and used to calculate transmissibility maps of the hands of three subjects.


Asunto(s)
Agricultura/instrumentación , Rayos Láser , Exposición Profesional/análisis , Procesamiento de Señales Asistido por Computador , Vibración , Aceleración , Enfermedades de los Trabajadores Agrícolas/etiología , Humanos , Exposición Profesional/efectos adversos , Reproducibilidad de los Resultados , Vibración/efectos adversos
8.
J Virol ; 72(11): 9025-33, 1998 Nov.
Artículo en Inglés | MEDLINE | ID: mdl-9765447

RESUMEN

Human immunodeficiency virus infection is characterized by a progressive decline in the number of peripheral blood CD4(+) T lymphocytes, which finally leads to AIDS. This T-cell decline correlates with the degree of in vitro-induced lymphocyte apoptosis. However, such a correlation has not yet been described in feline AIDS, caused by feline immunodeficiency virus (FIV) infection. We therefore investigated the intensity of in vitro-induced apoptosis in peripheral blood lymphocytes from cats experimentally infected with a Swiss isolate of FIV for 1 year and for 6 years and from a number of long-term FIV-infected cats which were coinfected with feline leukemia virus. Purified peripheral blood lymphocytes were either cultured overnight under nonstimulating conditions or stimulated with phytohemagglutinin and interleukin-2 for 60 h. Under stimulating conditions, the isolates from the infected cats showed significantly higher relative counts of apoptotic cells than did those from noninfected controls (1-year-infected cats, P = 0.01; 6-year-infected cats, P = 0.006). The frequency of in vitro-induced apoptosis was inversely correlated with the CD4(+) cell count (P = 0. 002), bright CD8(+) cell count (P = 0.009), and CD4/CD8 ratio (P = 0. 01) and directly correlated with the percentage of bright major histocompatibility complex class II-positive peripheral blood lymphocytes (P = 0.004). However, we found no correlation between in vitro-induced apoptosis and the viral load in serum samples. Coinfection with feline leukemia virus enhanced the degree of in vitro-induced apoptosis compared with that in FIV monoinfected cats. We concluded that the degree of in vitro-induced apoptosis was closely related to FIV-mediated T-cell depletion and lymphocyte activation and could be used as an additional marker for disease progression in FIV infection.


Asunto(s)
Apoptosis , Síndrome de Inmunodeficiencia Adquirida del Felino/etiología , Síndrome de Inmunodeficiencia Adquirida del Felino/patología , Virus de la Inmunodeficiencia Felina/patogenicidad , Infecciones por Lentivirus/etiología , Infecciones por Lentivirus/patología , Linfocitos/patología , Animales , Biomarcadores , Relación CD4-CD8 , Gatos , Síndrome de Inmunodeficiencia Adquirida del Felino/inmunología , Femenino , Productos del Gen gag/análisis , Humanos , Virus de la Inmunodeficiencia Felina/inmunología , Técnicas In Vitro , Infecciones por Lentivirus/inmunología , Activación de Linfocitos , Linfocitos/inmunología , Linfocitos/virología , Masculino , Linfocitos T/inmunología , Linfocitos T/patología , Factor de Necrosis Tumoral alfa/metabolismo
9.
J Biol Chem ; 273(40): 25703-12, 1998 Oct 02.
Artículo en Inglés | MEDLINE | ID: mdl-9748238

RESUMEN

Various monovalent cations influence the enzymatic activity and the spectroscopic properties of methylamine dehydrogenase (MADH). Here, we report the structure determination of this tryptophan tryptophylquinone-containing enzyme from Methylobacterium extorquens AM1 by high resolution x-ray crystallography (1.75 A). This first MADH crystal structure at low ionic strength is compared with the high resolution structure of the related MADH from Paracoccus denitrificans recently reported. We also describe the first structures (at 1.95 to 2.15 A resolution) of an MADH in the substrate-reduced form and in the presence of trimethylamine and of cesium, two competitive inhibitors. Polarized absorption microspectrophotometry was performed on single crystals under various redox, pH, and salt conditions. The results show that the enzyme is catalytically active in the crystal and that the cations cause the same spectral perturbations as are observed in solution. These studies lead us to propose a model for the entrance and binding of the substrate in the active site.


Asunto(s)
Proteínas Bacterianas/química , Indolquinonas , Oxidorreductasas actuantes sobre Donantes de Grupo CH-NH/química , Quinonas/química , Triptófano/análogos & derivados , Sitios de Unión , Cesio/farmacología , Cristalografía por Rayos X , Metilaminas/metabolismo , Metilaminas/farmacología , Modelos Moleculares , Espectrofotometría , Triptófano/química
10.
Fold Des ; 3(4): 285-91, 1998.
Artículo en Inglés | MEDLINE | ID: mdl-9710574

RESUMEN

BACKGROUND: Retinol is tightly packed inside the structure of its plasma carrier (retinol-binding protein, RBP). It was found that retinol release from RBP to aqueous solutions is facilitated by either very low pH or very high temperatures (i.e. by non-physiological conditions that cause protein denaturation). It was also found that alcohols induce protein conformational transitions to denatured states. On this basis, it may be suggested that retinol release in vivo is facilitated by the partial unfolding of the carrier resulting from the concerted action of the moderate local decrease of pH and the moderate local decrease of dielectric constant in proximity to the target membranes. RESULTS: In vitro, at 37 degrees C, retinol is removed from its plasma carrier by the concerted action of the moderately low pH and the moderately low dielectric constant of solutions containing a low ionic strength buffer and methanol in variable proportions. Release of retinol is accompanied by a conformational transition of RBP from the native to the molten-globule state. CONCLUSIONS: The physiological function of RBP-targeted delivery of retinol-is mimicked in vitro by the facilitated release of retinol (associated with a partial unfolding of the protein carrier) in solutions exhibiting pH and dielectric constant values that are within the range of values expected in the in vivo microenvironment.


Asunto(s)
Desnaturalización Proteica , Retinaldehído/metabolismo , Proteínas de Unión al Retinol/química , Dicroismo Circular , Fluorescencia , Humanos , Concentración de Iones de Hidrógeno , Metanol/farmacología , Unión Proteica/fisiología , Conformación Proteica/efectos de los fármacos , Pliegue de Proteína , Proteínas Plasmáticas de Unión al Retinol , Triptófano/química
12.
J Anim Sci ; 76(3): 758-65, 1998 Mar.
Artículo en Inglés | MEDLINE | ID: mdl-9535335

RESUMEN

The effects of feeding different amounts of colostrum or only milk replacer and the effects of Long-R3-IGF-I (administered s.c. or orally; 50 microg/[kg BW x d] for 7 d), and of s.c. injected recombinant bovine GH (rbGH; 1 mg/[kg BW x d] for 7 d) on small intestinal mucosal morphology in newborn calves were studied by histomorphometry. Neonatal calves fed colostrum six times exhibited greater (P < .01) villus circumferences, areas, and heights in total small intestine and especially in the duodenum than calves fed only milk replacer. Furthermore, villus circumferences and areas in total small intestine were greater (P < .05) in calves fed colostrum once than in calves fed no colostrum. Villus size in total small intestine was smaller (P < .05) in rbGH-treated than in control calves; jejunum villus circumferences and heights were especially reduced (P < .05). Crypt depths in ileum were greater (P < .05) in rbGH-treated calves. In conclusion, prolonged colostrum supply significantly enhanced small intestinal villus size in neonatal calves. In contrast, Long-R3-IGF-I had no significant influence on small intestinal morphology, and rbGH in supraphysiological amounts even reduced small intestinal mucosal variables after 1 wk of treatment. The study demonstrated enhanced postnatal development of the gastrointestinal tract by prolonged colostrum feeding, but not by Long-R3-IGF-I or GH.


Asunto(s)
Alimentación Animal , Calostro , Hormona del Crecimiento/farmacología , Factor I del Crecimiento Similar a la Insulina/análogos & derivados , Mucosa Intestinal/efectos de los fármacos , Intestino Delgado/citología , Análisis de Varianza , Animales , Animales Recién Nacidos , Bovinos , Factor I del Crecimiento Similar a la Insulina/farmacología , Mucosa Intestinal/citología , Masculino , Microvellosidades/efectos de los fármacos , Microvellosidades/ultraestructura , Leche , Proteínas Recombinantes/farmacología , Factores de Tiempo
13.
Chest ; 112(2): 523-9, 1997 Aug.
Artículo en Inglés | MEDLINE | ID: mdl-9266893

RESUMEN

In recent years, the emerging concept of bronchial inflammation as a prominent histopathologic characteristic of asthma has profoundly modified the view of the role of the mast cell, which was traditionally thought to be linked to the release of soluble chemical mediators substantially involved in the genesis of acute, immediate bronchospasm. The finding that the production of proinflammatory cytokines by mast cells in asthmatic airways is comparable, in some circumstances, to that of T-cell origin, has led to the hypothesis that mast cells, along with T lymphocytes and eosinophils, may also contribute to the genesis of chronic, persistent asthma. This hypothesis is further supported by the finding that mast cells are able to functionally interact with B cells (promoting IgE synthesis) and T lymphocytes (acting as antigen presenting cells), thus taking part in the immune network. Moreover, mast cells produce an exclusive family of proteases (tryptases and chymases) that exert many biological actions relevant to airways inflammation and remodeling. Future studies will better explain the role of mast cells in asthma and, more specifically, the links with bone marrow-where mast cell progenitors originate-and the airways, where mast cells develop, differentiate, and assume the functions of mature cells. This article reviews recent data available on these topics.


Asunto(s)
Asma , Mastocitos , Asma/inmunología , Asma/fisiopatología , Linfocitos B/inmunología , Citocinas/inmunología , Humanos , Mastocitos/inmunología , Mastocitos/fisiología , Linfocitos T/inmunología
14.
Pharmacol Res ; 35(4): 321-7, 1997 Apr.
Artículo en Inglés | MEDLINE | ID: mdl-9264049

RESUMEN

Streptozocin (STZ)-diabetic rats have low hypothalamic luteotropic hormone-releasing hormone (LHRH) secretion and various alterations of gonadotrope cells, among which low luteotropic hormone (LH) secretion. Possible causes for the gonadotrope disorders may be low hypothalamic LHRH secretion alone or combined with reduced (a) number of LHRH receptor sites, or (b) receptor to ligand affinity, or (c) of LHRH receptor-bearing cells. To clarify this question we determined by saturation and competition binding Bmax, KD and KA of the LHRH receptor sites and counted the receptor-bearing cells in pituitary glands of control and STZ-diabetic adult male rats. We found a single receptor class, the Bmax was strongly reduced in diabetic animals whereas both KD and KA were similar in the two groups. The number of LHRH receptor-bearing cells in diabetic animals was increased. Therefore a reduced number of receptor sites per gonadotrope cell occurs in our model. Since in the STZ-diabetic male rats the number of gonadotropes is increased, a higher number of receptor-bearing cells was observed. We conclude that the reduced LH secretion from the diabetic pituitary gland might be due to a reduced number of LHRH receptor sites in the pituitary gland. The increased number of receptor-bearing cells might partially compensate for this change.


Asunto(s)
Diabetes Mellitus Experimental/metabolismo , Hipófisis/metabolismo , Receptores LHRH/metabolismo , Animales , Biotina , Glucemia/metabolismo , Diabetes Mellitus Experimental/patología , Hormonas/sangre , Inmunohistoquímica , Insulina/sangre , Radioisótopos de Yodo , Cinética , Masculino , Membranas/efectos de los fármacos , Membranas/metabolismo , Tamaño de los Órganos/fisiología , Hipófisis/patología , Ratas , Ratas Sprague-Dawley , Aumento de Peso/fisiología
15.
Protein Sci ; 6(2): 484-9, 1997 Feb.
Artículo en Inglés | MEDLINE | ID: mdl-9041656

RESUMEN

In solution, the oxygen affinity of hemoglobin in the T quaternary structure is decreased in the presence of allosteric effectors such as protons and organic phosphates. To explain these effects, as well as the absence of the Bohr effect and the lower oxygen affinity of T-state hemoglobin in the crystal compared to solution, Rivetti C et al. (1993a, Biochemistry 32:2888-2906) suggested that there are high- and low-affinity subunit conformations of T, associated with broken and unbroken intersubunit salt bridges. In this model, the crystal of T-state hemoglobin has the lowest possible oxygen affinity because the salt bridges remain intact upon oxygenation. Binding of allosteric effectors in the crystal should therefore not influence the oxygen affinity. To test this hypothesis, we used polarized absorption spectroscopy to measure oxygen binding curves of single crystals of hemoglobin in the T quaternary structure in the presence of the "strong" allosteric effectors, inositol hexaphosphate and bezafibrate. In solution, these effectors reduce the oxygen affinity of the T state by 10-30-fold. We find no change in affinity (< 10%) of the crystal. The crystal binding curve, moreover, is noncooperative, which is consistent with the essential feature of the two-state allosteric model of Monod J, Wyman J, and Changeux JP (1965, J Mol Biol 12:88-118) that cooperative binding requires a change in quaternary structure. Noncooperative binding by the crystal is not caused by cooperative interactions being masked by fortuitous compensation from a difference in the affinity of the alpha and beta subunits. This was shown by calculating the separate alpha and beta subunit binding curves from the two sets of polarized optical spectra using geometric factors from the X-ray structures of deoxygenated and fully oxygenated T-state molecules determined by Paoli M et al. (1996, J Mol Biol 256:775-792).


Asunto(s)
Hemoglobinas/metabolismo , Oxígeno/metabolismo , Regulación Alostérica , Cristalización , Hemoglobinas/química , Cinética , Unión Proteica , Conformación Proteica
16.
J Biol Chem ; 272(52): 33077-84, 1997 Dec 26.
Artículo en Inglés | MEDLINE | ID: mdl-9407091

RESUMEN

To correlate directly structure with function, the oxygen affinity and the three-dimensional structure of crystals of the T quaternary state of des-His-146beta human hemoglobin have been determined by polarized absorption microspectrophotometry and x-ray diffraction crystallography. In des-His-146beta, the COOH-terminal histidine residues of the beta chains of hemoglobin A have been removed. Oxygen binding to crystalline des-His hemoglobin is non-cooperative and independent of pH. The oxygen affinity is 1.7-fold greater than that of the crystalline state of hemoglobin A. Removal of His-146beta results in a small movement of the truncated COOH-terminal peptide and in a very small change in quaternary structure. Previously, similar studies on T state crystals of des-Arg-141alpha hemoglobin showed that removal of the COOH termini of the alpha chains results in much larger effects on oxygen affinity and on quaternary structure. Kinetic studies in solution reveal that at pH 7.0, the rates of CO combination with deoxygenated des-His-146beta in the absence and presence of inositol hexaphosphate are 2.5- and 1.3-fold, respectively, more rapid than for hemoglobin A. The values for des-Arg are 7.6- and 3.9-fold. The properties of the T state of hemoglobin both in the crystal and in solution are influenced to a greater degree by the interactions associated with Arg-141alpha than those associated with His-146beta.


Asunto(s)
Hemoglobina A/química , Oxígeno/metabolismo , Simulación por Computador , Cristalografía por Rayos X , Hemoglobina A/metabolismo , Humanos , Cinética , Modelos Moleculares , Datos de Secuencia Molecular , Conformación Proteica
17.
Proteins ; 25(4): 425-37, 1996 Aug.
Artículo en Inglés | MEDLINE | ID: mdl-8865338

RESUMEN

Oxygen binding by the human hemoglobin tetramer in the T quaternary structure is apparently noncooperative in the crystalline state (Hill n = 1.0), as predicted by the two-state allosteric model of Monod, Wyman, and Changeux (MWC) (Mozzarelli et al., Nature 351:416-419, 1991; Rivetti et al., Biochemistry 32:2888-2906, 1993). However, cooperativity within the tetramer can be masked by a difference in affinity between the alpha and beta subunits. Indeed, analysis of the binding curves derived from absorption of light polarized along two different crystal directions, for which the projections of the alpha and beta hemes are slightly different, revealed an inequivalence in the intrinsic oxygen affinity of the alpha and beta subunits (p50(alpha) approximately 80 torr, p50(beta) approximately 370 torr at 15 degrees C) that compensates a small amount of cooperativity (Rivetti et al., Biochemistry 32:2888-2906, 1993). To further investigate this problem, we have measured oxygen binding curves of single crystals of hemoglobin (in a different lattice) in which the iron in the alpha subunits has been replaced by the non-oxygen-binding nickel(II). The Hill n is 0.90 +/- 0.06, and the p50 is slightly different for light polarized parallel to different crystal directions, indicating a very small difference in affinity between the two crystallographically inequivalent beta subunits. The average crystal p50 is 110 +/- 20 torr at 15 degrees C, close to the p50 of 80 torr observed in solution, but about threefold less than the p50 calculated by Rivetti et al. (Biochemistry 32:2888-2906, 1993) for the beta subunits of the unsubstituted tetramer. These results suggest that Rivetti et al., if anything, overestimated the alpha/beta inequivalence. They therefore did not underestimate the cooperativity within the T quaternary structure, when they concluded that it represents a small deviation from the perfectly noncooperative binding of an MWC allosteric model. Our conclusion of nearly perfect MWC behavior for binding to the T state of unmodified hemoglobin raises the question of the relevance of the large T-state cooperativity inferred for cyanide binding to partially oxidized hemoglobin (Ackers et al., Science 255:54-63, 1992).


Asunto(s)
Hemoglobinas/metabolismo , Oxígeno/metabolismo , Sitio Alostérico , Hemoglobinas/química , Humanos , Concentración de Iones de Hidrógeno , Unión Proteica , Conformación Proteica , Análisis Espectral
18.
J Biol Chem ; 271(16): 9177-80, 1996 Apr 19.
Artículo en Inglés | MEDLINE | ID: mdl-8621571

RESUMEN

Enzymatic and electron transfer activities have been studied by polarized absorption spectroscopy in single crystals of both binary and ternary complexes of methylamine dehydrogenase (MADH) with its redox partners. Within the crystals, MADH oxidizes methylamine, and the electrons are passed from the reduced tryptophan tryptophylquinone (TTQ) cofactor to the copper of amicyanin and to the heme of cytochrome c551i via amicyanin. The equilibrium distribution of electrons among the cofactors, and the rate of heme reduction after reaction with substrate, are both dependent on pH. The presence of copper in the ternary complex is not absolutely required for electron transfer from TTQ to heme, but its presence greatly enhances the rate of electron flow to the heme.


Asunto(s)
Proteínas Bacterianas/química , Grupo Citocromo c/química , Indolquinonas , Oxidorreductasas actuantes sobre Donantes de Grupo CH-NH/química , Estructura Secundaria de Proteína , Proteínas Bacterianas/metabolismo , Sitios de Unión , Cobre , Cristalización , Grupo Citocromo c/metabolismo , Transporte de Electrón , Hemo , Sustancias Macromoleculares , Modelos Estructurales , Oxidorreductasas actuantes sobre Donantes de Grupo CH-NH/metabolismo , Quinonas/metabolismo , Espectrofotometría/métodos , Triptófano/análogos & derivados , Triptófano/metabolismo
19.
Biochemistry ; 35(6): 1872-80, 1996 Feb 13.
Artículo en Inglés | MEDLINE | ID: mdl-8639669

RESUMEN

The equilibrium distribution of catalytic intermediates formed in the reaction of L-serine with the tryptophan synthase alpha 2 beta 2-complex from Salmonella typhimurium has been investigated by absorption and fluorescence spectroscopy as a function of pH, temperature, and alpha-subunit ligands. The novel result of this study is that the equilibrium between the two major catalytic species, the external aldimine and the alpha-aminoacrylate, is modulated by the ionization of two groups with apparent pK values of 7.8 +/- 0.3 and 10.3 +/- 0.2. Protonation of these groups stabilizes the alpha-aminoacrylate Schiff base by an estimated 100-fold with respect to the external aldimine. Furthermore, the formation of the alpha-aminoacrylate from the external aldimine is an endothermic process. Temperature slightly affects the apparent pK values but remarkably influences the amplitude of the phase associated with the ionization of each group. At 20 degrees C, each phase accounts for nearly half of the titration. Since the isolated beta 2-dimer does not exhibit a pH-dependent distribution of intermediates, the alpha-beta-subunit interactions seem critical to the onset of this functional property of the beta-subunit. The modulation of intersubunit interactions by the alpha-subunit ligands DL-alpha-glycerol 3-phosphate and phosphate leads to significant changes in the pH-dependent distribution of intermediates. At saturating concentrations of either of these alpha-subunit ligands, the alpha-aminoacrylate Schiff base is the predominant species over a wide pH range while the apparent pK values of the groups that control the equilibrium are not significantly affected. The pH-dependent interconversion of catalytic intermediates here reported has not been previously detected because phosphate buffers have usually been employed in the studies of this enzyme. Our findings are discussed in the light of a model in which specific protein conformations are associated with the external aldimine and the alpha-aminoacrylate Schiff bases, the latter being stabilized by temperature, protons, and alpha-subunit ligands.


Asunto(s)
Triptófano Sintasa/metabolismo , Regulación Alostérica , Concentración de Iones de Hidrógeno , Ligandos , Conformación Proteica , Protones , Fosfato de Piridoxal/metabolismo , Salmonella typhimurium/enzimología , Bases de Schiff/química , Bases de Schiff/metabolismo , Serina/metabolismo , Temperatura , Triptófano Sintasa/química
20.
J Biol Chem ; 271(7): 3627-32, 1996 Feb 16.
Artículo en Inglés | MEDLINE | ID: mdl-8631972

RESUMEN

Oxygen binding to homodimeric Scapharca inaequivalvis hemoglobin (HbI) crystals has been investigated by single-crystal polarized absorption microspectrophotometry. The saturation curve, characterized by a Hill coefficient nH = 1.45 and an oxygen pressure at half saturation p50 = 4.8 torr, at 15 degrees C, shows that HbI in the crystalline state retains positive cooperativity in ligand binding. This finding will permit the correlation of the oxygen-linked conformational changes in the crystal with the expression of cooperativity. Polarized absorption spectra of deoxy-HbI, oxy-HbI, and oxidized HbI crystals indicate that oxygenation does not induce heme reorientation, whereas oxidation does. Lattice interactions prevent the dissociation of oxidized dimers that occurs in solution and stabilize an equilibrium distribution of pentacoordinate and hexacoordinate high spin species.


Asunto(s)
Hemoglobinas/metabolismo , Oxihemoglobinas/metabolismo , Animales , Bivalvos , Cristalización , Hemoglobinas/química , Hemoglobinas/aislamiento & purificación , Concentración de Iones de Hidrógeno , Cinética , Sustancias Macromoleculares , Concentración Osmolar , Oxidación-Reducción , Oxígeno , Oxihemoglobinas/química , Oxihemoglobinas/aislamiento & purificación , Soluciones , Espectrofotometría
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