RESUMEN
The potential energy surface of 1-H-pyrrolo[3,2-b]pyridine-3-yl acetic acid has been investigated via RIIF/6-31G* calculations. The stationary points and reaction paths for syn orientation of the COOH group were determined and are compared with those of the derivatives of 3-indole acetic acid, which act as plant growth hormones. 1-H-pyrrolo[3,2-b]pyridine-3-yl acetic acid forms a kinetically stable conformer with a strong intramolecular hydrogen bond, in which the COOH group is in anti orientation. The influence of this hydrogen bond on bond lengths and vibration frequencies is described.
Asunto(s)
Acetatos/química , Piridinas/química , Fenómenos Biofísicos , Biofisica , Enlace de Hidrógeno , Ácidos Indolacéticos/química , Ligandos , Modelos QuímicosRESUMEN
The potential energy surface of the neutral form ofγ-aminobutyric acid was investigated by means of ab-initio 4-31 G SCF calculations. Geometries, energies, and selected wave numbers of all 62 symmetry unique local minima are reported. Intramolecular interactions and all reactions, which involve the intramolecular hydrogen bond, are discussed and compared with those present in the homologuesß-alanine and glycine.
RESUMEN
The potential energy surfaces of variousω-amino acids,ω-hydroxy acids, andω-amino alcohols have been investigated by ab-initio RHF calculations in the recent years. In order to find a common scheme for these molecules an energy function was developed, in which the energy is defined as a function of only those dihedral angles that are essential for the description of the nuclear framework. A least square fit procedure is performed to yield the parameters. Minimum geometries with unfavourable contributions are sorted out, as long as the correlation coefficient is below a predefined threshhold. The differences between the given (quantum chemical) and the estimated energies are small for minimum geometries which were used to fit the parameters, and larger for those which have been omitted in the fit. For conformers with intramolecular hydrogen bonding these energy differences turn out to be in the range of the interaction energy predicted for the H-bond contribution. The method can therefore be used as a semi-quantitative measure of the influence of additional interactions to the conformational energy.