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1.
PLoS One ; 16(7): e0252246, 2021.
Artículo en Inglés | MEDLINE | ID: mdl-34260613

RESUMEN

Bombyx mori, a monophagous insect, prefers leaves of the certain species of Morus more than others. The preference has been attributed to morphological and anatomical features and biochemical compounds. In the present manuscript a comparison has been made among the transcriptome of leaves of the two preferred cultivated varieties and three wild types species. While assembling, high quality transcriptomes of five genotypes were constructed with a total of 100930, 151245, 89724, 181761 and 102908 transcripts from ML, MN, MS, K2 and V1 samples respectively. Further, to compare them, orthologs were identified from these assembled transcriptome. A total of 22462, 23413, 23685, 24371, 18362, 22326, 20058, 18049, 17567 and 20518 clusters of orthologs were found in one to one comparison in KvsN, KvsL, KvsS, KvsV, LvsN, LvsS, LvsV, NvsS, NvsV, and SvsV respectively. 4236 orthologs with algebraic connectivity of 1.0 were then used to compare and to find out differentially expressed transcripts from all the genotypes. A total of 1037 transcripts expressed that include some of the important morphology, anatomy and biochemical pathways regulating transcription factors (AP2/ERFs and C2H2 Zinc fingers) and signalling components were identified to express differentially. Further, these transcriptomes were used find out markers (SSR) and variants and a total of 1101013, 537245, 970877, 310437, 675772, 338400, 581189, 751477, 514999 and 257107 variants including SNP, MNP, Insertions and deletions were found in one to one comparisons. Taken together, our data could be highly useful for mulberry community worldwide as it could be utilized in mulberry breeding programs.


Asunto(s)
Perfilación de la Expresión Génica , Morus/genética , Hojas de la Planta/genética , Animales , Bombyx , Genotipo , Fitomejoramiento
2.
Plant Cell Rep ; 40(11): 2151-2171, 2021 Nov.
Artículo en Inglés | MEDLINE | ID: mdl-33997916

RESUMEN

KEY MESSAGE: MiWRKY53 is expressed in response to various stresses and hormones. Although it is localized in the nucleus, it shows no transcriptional activation. Role of SA-mediated plant defence response is demonstrated. WRKY transcription factors are one the largest gene families in plants involved in almost every process in plants including development, physiological processes, and stress response. Salicylic acid (SA) is key regulator of biotic stress against various pathogens in plants acting via its multiple mechanisms to induce defence response. Herein, we have identified and functionally validated WRKY53 from mulberry (Morus indica var. K2). MiWRKY53 expressed differentially in response to different stress and hormonal treatments. MiWRKY53 belongs to group III of WKRY gene family, localized in nucleus, and lacks transcriptional activation activity in yeast. Hormone responsive behaviour of MiWRKY53 Arabidopsis overexpression (OE) transgenics preferentially was noted in root growth assay in response to Salicylic acid (SA). Arabidopsis overexpression plants also displayed alteration in leaf phenotype having wider leaves than the wild-type plants. PR-1 transcripts were higher in MiWRKY53 Arabidopsis OE plants and they displayed resistance towards biotrophic pathogen Pseudomonas syringae PstDC3000. MiWRKY53 Mulberry OE transgenics also depicted SA-responsive behaviour. Several hormones and stress-related cis-acting elements were also identified in the 1.2-Kb upstream regulatory region (URR) of MiWRKY53. Functional characterization of full-length promoter region revealed that it is induced by SA and further analysis of deletion constructs helped in the identification of minimal promoter responsible for its inducibility by SA. Altogether, the findings from this study point towards the SA preferential behaviour of MiWRKY53 and its function as regulator of plant defence response through SA-mediated mechanisms.


Asunto(s)
Morus/fisiología , Proteínas de Plantas/genética , Ácido Salicílico/metabolismo , Factores de Transcripción/genética , Arabidopsis/genética , Arabidopsis/microbiología , Resistencia a la Enfermedad/genética , Regulación de la Expresión Génica de las Plantas/efectos de los fármacos , Morus/genética , Enfermedades de las Plantas/genética , Enfermedades de las Plantas/microbiología , Reguladores del Crecimiento de las Plantas/farmacología , Proteínas de Plantas/metabolismo , Plantas Modificadas Genéticamente , Regiones Promotoras Genéticas , Pseudomonas syringae/patogenicidad , Ácido Salicílico/farmacología , Estrés Fisiológico , Factores de Transcripción/metabolismo , Levaduras/genética
3.
Genes (Basel) ; 8(9)2017 Aug 25.
Artículo en Inglés | MEDLINE | ID: mdl-28841197

RESUMEN

Auxin Response Factors (ARFs) are at the core of the regulation mechanism for auxin-mediated responses, along with AUX/IAA proteins.They are critical in the auxin-mediated control of various biological responses including development and stress. A wild mulberry species genome has been sequenced and offers an opportunity to investigate this important gene family. A total of 17 ARFs have been identified from mulberry (Morus notabilis) which show a wide range of expression patterns. Of these 17 ARFs, 15 have strong acidic isoelectric point (pI) values and a molecular mass ranging from 52 kDa to 101 kDa. The putative promoters of these ARFs harbour cis motifs related to light-dependent responses, various stress responses and hormone regulations suggestive of their multifactorial regulation. The gene ontology terms for ARFs indicate their role in flower development, stress, root morphology and other such development and stress mitigation related activities. Conserved motif analysis showed the presence of all typical domains in all but four members that lack the PB1 domain and thus represent truncated ARFs. Expression analysis of these ARFs suggests their preferential expression in tissues ranging from leaf, root, winter bud, bark and male flowers. These ARFs showed differential expression in the leaf tissue of M. notabilis, Morus laevigata and Morus serrata. Insights gained from this analysis have implications in mulberry improvement programs.

4.
Sci Rep ; 6: 30794, 2016 08 01.
Artículo en Inglés | MEDLINE | ID: mdl-27477686

RESUMEN

Mulberry is known to be sensitive to several biotic and abiotic stresses, which in turn have a direct impact on the yield of silk, because it is the sole food source for the silk worm. WRKYs are a family of transcription factors, which play an important role in combating various biotic and abiotic stresses. In this study, we identified 54 genes with conserved WRKY motifs in the Morus notabilis genome. Motif searches coupled with a phylogenetic analysis revealed seven sub-groups as well as the absence of members of Group Ib in mulberry. Analyses of the 2K upstream region in addition to a gene ontology terms enrichment analysis revealed putative functions of mulberry WRKYs under biotic and abiotic stresses. An RNA-seq-based analysis showed that several of the identified WRKYs have shown preferential expression in the leaf, bark, root, male flower, and winter bud of M. notabilis. Finally, expression analysis by qPCR under different stress and hormone treatments revealed genotype-specific responses. Taken together, our results briefs about the genome-wide identification of WRKYs as well as their differential response to stresses and hormones. Importantly, these data can also be utilized to identify potential molecular targets for conferring tolerance to various stresses in mulberry.


Asunto(s)
Evolución Molecular , Genoma de Planta , Morus/genética , Proteínas de Plantas/genética , Análisis de Secuencia de ADN , Factores de Transcripción/genética , Secuencias de Aminoácidos , Estudio de Asociación del Genoma Completo
5.
Org Med Chem Lett ; 3(1): 4, 2013 Mar 04.
Artículo en Inglés | MEDLINE | ID: mdl-23497605

RESUMEN

BACKGROUND: Glycosmis is a genus of evergreen glabrous shrub and distributed all over India. It possesses various medicinal properties and is used in indigenous medicine for cough, rheumatism, anemia, and jaundice. Glycosmis arborea is a rich source of alkaloids, terpenoids, coumarins, as well as flavonoids. RESULTS: The chemical investigation of methanol fraction of the leaves of G. arborea led to the isolation of one new flavone C-glycoside along with three known flavanoids, named as 5,7-dihydroxy-2-[4-hydroxy-3-(methoxy methyl) phenyl]-6-C-ß-d-glucopyranosyl flavone (4), 5,7,4'-trihydroxy-3'-methoxy flavone (1), 5,4'-dihydroxy-3'-methoxy-7-O-ß-d-glucupyranosyl flavanone (2), and 5,4'-dihydroxy-3'-methoxy-7-O-(α-l-rhamnosyl-(1‴→6‴)-ß-d-glucopyranosyl) flavanone (3), respectively. The structures of all compounds were elucidated with the help of nuclear magnetic resonance spectrometry. Pure compounds and fractions were evaluated for pest antifeedant and antimicrobial activity. CONCLUSION: Four compounds were isolated from the leaves of G. arborea. Among them, compound 4 showed significant antimicrobial activity.

6.
Acta Crystallogr C ; 69(Pt 1): 87-9, 2013 Jan.
Artículo en Inglés | MEDLINE | ID: mdl-23282922

RESUMEN

Asarinin, C(20)H(18)O(6), was isolated as a racemate from the shrub Zanthoxylum alatum. Both forms of the enantiomerically pure substance, (+)- and (-)-asarinin, have been the subject of a total of five previous structure determinations that are essentially identical except for the absolute stereochemistry. However, there seems to be some confusion in the literature concerning these structure determinations of asarinin and also those of its stereoisomer sesamin. The molecular structure of racemic asarinin differs from that of the pure enantiomers in the orientation of one ring system. In the packing of the racemate, molecules are linked by C-H...O interactions to form ribbons parallel to [101].


Asunto(s)
Dioxoles/química , Medicamentos Herbarios Chinos/química , Lignanos/química , Zanthoxylum/química , Cristalografía por Rayos X , Dioxoles/aislamiento & purificación , Medicamentos Herbarios Chinos/aislamiento & purificación , Enlace de Hidrógeno , Lignanos/aislamiento & purificación , Estructura Molecular , Estereoisomerismo
7.
J Nat Med ; 67(1): 137-42, 2013 Jan.
Artículo en Inglés | MEDLINE | ID: mdl-22456894

RESUMEN

From the roots of Hemidesmus indicus, one new condensed phenylpropanoid glucoside and three new pregnenolone glycosides, named hemidesmosides A-C, were isolated along with one known related compound, plocoside A.


Asunto(s)
Glicósidos/química , Hemidesmus/química , Raíces de Plantas/química , Pregnanos/química , Saponinas/química
8.
Nat Prod Res ; 25(18): 1680-6, 2011 Oct.
Artículo en Inglés | MEDLINE | ID: mdl-21756197

RESUMEN

The essential oil of Premna latifolia Roxb. was obtained by hydrodistillation of fresh leaves of the plant having an oil yield of 0.05%, both non-polar and essential oil were analysed by GC and GC-MS. Hexane fraction of the leaves of P. latifolia was transesterified and analysed by GC and GC-MS, 40 non-polar components were identified comprising 89.3%. The most abundant fatty acid constituents were hexadecanoic acid (25.04%), 8,11,14-docosatrienoic acid (13.62%), octadecanoic acid (6.82%), 9,12-octadecadienoic acid (4.19%) and 29 components were investigated in the essential oil which comprises 78.1%. The most abundant oil constituents were 1-octen-3-ol (35.69%), terpendiol II (7.19%), δ-guaiene (7.49%) 2-undecanone (4.80%) and α-pinene (3.27%). Different extracts were also tested against polyphagous crop pest Spodoptera litura for antifeedant activity. Essential oil showed maximum growth reduction of 56.83% followed by chloroform extract of 43.93%.


Asunto(s)
Ácidos Grasos/análisis , Aceites Volátiles/análisis , Hojas de la Planta/química , Verbenaceae/química , Animales , Cromatografía de Gases , Cromatografía de Gases y Espectrometría de Masas , Hexanos , India , Larva/efectos de los fármacos , Larva/crecimiento & desarrollo , Aceites Volátiles/farmacología , Ácido Palmítico/análisis , Ácido Palmítico/aislamiento & purificación , Spodoptera/efectos de los fármacos , Spodoptera/crecimiento & desarrollo , Ácidos Esteáricos/análisis , Ácidos Esteáricos/aislamiento & purificación
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