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1.
Front Microbiol ; 7: 234, 2016.
Artículo en Inglés | MEDLINE | ID: mdl-27014192

RESUMEN

Distinct distribution patterns of members of the major bacterial clades SAR11, SAR86, and Actinobacteria were observed across a transect from the Marquesas islands through the ultra-oligotrophic South Pacific Gyre into the Chilean upwelling using 16S rRNA gene sequencing and RNA-DNA fingerprinting. Three different Actinobacteria sequence clusters belonging to "Candidatus Actinomarinidae" were localized in the western half of the transect, one was limited to the gyre deep chlorophyll maximum (DCM) and sequences affiliated to the OCS155 clade were unique to the upwelling. The structure of the surface bacterial community was highly correlated with water mass and remained similar across the whole central gyre (1300 nautical miles). The surface hyperoligotrophic gyre was dominated (>70% of all sequences) by highly diverse SAR11 and SAR86 operational taxonomic units and these communities were significantly different from those in the DCM. Analysis of 16S rRNA fingerprints generated from RNA allowed insights into the potential activity of assigned bacterial groups. SAR11 and Prochlorococcus showed the highest potential activity in all water masses except for the upwelling, accounting together for 65% of the total bacterial 16S rRNA in the gyre surface waters in equal proportions whereas the contribution of SAR11 decreased significantly at the DCM.

2.
Water Res ; 47(2): 558-68, 2013 Feb 01.
Artículo en Inglés | MEDLINE | ID: mdl-23164217

RESUMEN

The complexity of Reverse Osmosis (RO) membrane fouling phenomenon has been widely studied and several factors influencing it have been reported by many researchers. This original study involves the investigation of two different fouling profiles produced at a seawater RO desalination plant installed on a floating mobile barge. The plant was moved along the coastline of the Red Sea in Saudi Arabia. The two locations where the barge was anchored showed different water quality. At the second location, two modules were harvested. One of the modules was pre-fouled by inorganics during plant operation at the previous site while the other was installed at the second site. Fouled membranes were subjected to a wide range of chemical and microbiological characterization procedures. Drastically different fouling patterns were observed in the two membranes which indicates the influence of source water quality on membrane surface modification and on fouling of RO membranes.


Asunto(s)
Incrustaciones Biológicas , Membranas Artificiales , Agua de Mar/química , Purificación del Agua/instrumentación , Calidad del Agua , Recursos Hídricos/análisis , Abastecimiento de Agua/análisis , Biopelículas/crecimiento & desarrollo , Incrustaciones Biológicas/prevención & control , Cromatografía de Gases y Espectrometría de Masas , Bacterias Gramnegativas/clasificación , Bacterias Gramnegativas/crecimiento & desarrollo , Bacterias Gramnegativas/aislamiento & purificación , Bacterias Gramnegativas/fisiología , Bacterias Grampositivas/clasificación , Bacterias Grampositivas/crecimiento & desarrollo , Bacterias Grampositivas/aislamiento & purificación , Bacterias Grampositivas/fisiología , Océano Índico , Espectroscopía de Resonancia Magnética , Microscopía Electrónica de Transmisión de Rastreo , Tipificación Molecular , Ósmosis , Arabia Saudita , Agua de Mar/microbiología , Espectrometría por Rayos X , Espectroscopía Infrarroja por Transformada de Fourier , Propiedades de Superficie
3.
Plant J ; 64(1): 26-37, 2010 Oct.
Artículo en Inglés | MEDLINE | ID: mdl-20659279

RESUMEN

As the shoot apex produces most of the cells that comprise the aerial part of the plant, perfect orchestration between cell division rates and fate specification is essential for normal organ formation and plant development. However, the inter-dependence of cell-cycle machinery and meristem-organizing genes is still poorly understood. To investigate this mechanism, we specifically inhibited the cell-cycle machinery in the shoot apex by expression of a dominant negative allele of the A-type cyclin-dependent kinase (CDK) CDKA;1 in meristematic cells. A decrease in the cell division rate within the SHOOT MERISTEMLESS domain of the shoot apex dramatically affected plant growth and development. Within the meristem, a subset of cells was driven into the differentiation pathway, as indicated by premature cell expansion and onset of endo-reduplication. Although the meristem structure and expression patterns of the meristem identity genes were maintained in most plants, the reduced CDK activity caused splitting of the meristem in some plants. This phenotype correlated with the level of expression of the dominant negative CDKA;1 allele. Therefore, we propose a threshold model in which the effect of the cell-cycle machinery on meristem organization is determined by the level of CDK activity.


Asunto(s)
Proteínas de Arabidopsis/metabolismo , Arabidopsis/enzimología , Ciclo Celular , Quinasas Ciclina-Dependientes/metabolismo , Meristema/crecimiento & desarrollo , Brotes de la Planta/citología , Secuencias de Aminoácidos , Arabidopsis/genética , Arabidopsis/crecimiento & desarrollo , División Celular , Regulación del Desarrollo de la Expresión Génica , Regulación de la Expresión Génica de las Plantas , Meristema/citología , Brotes de la Planta/crecimiento & desarrollo , Plantas Modificadas Genéticamente/enzimología , Plantas Modificadas Genéticamente/genética , Plantas Modificadas Genéticamente/crecimiento & desarrollo , Regiones Promotoras Genéticas
4.
Plant Cell ; 17(6): 1723-36, 2005 Jun.
Artículo en Inglés | MEDLINE | ID: mdl-15863515

RESUMEN

Exit from the mitotic cell cycle and initiation of cell differentiation frequently coincides with the onset of endoreduplication, a modified cell cycle during which DNA continues to be duplicated in the absence of mitosis. Although the mitotic cell cycle and the endoreduplication cycle share much of the same machinery, the regulatory mechanisms controlling the transition between both cycles remain poorly understood. We show that the A-type cyclin-dependent kinase CDKA;1 and its specific inhibitor, the Kip-related protein, KRP2 regulate the mitosis-to-endocycle transition during Arabidopsis thaliana leaf development. Constitutive overexpression of KRP2 slightly above its endogenous level only inhibited the mitotic cell cycle-specific CDKA;1 kinase complexes, whereas the endoreduplication cycle-specific CDKA;1 complexes were unaffected, resulting in an increase in the DNA ploidy level. An identical effect on the endoreduplication cycle could be observed by overexpressing KRP2 exclusively in mitotically dividing cells. In agreement with a role for KRP2 as activator of the mitosis-to-endocycle transition, KRP2 protein levels were more abundant in endoreduplicating than in mitotically dividing tissues. We illustrate that KRP2 protein abundance is regulated posttranscriptionally through CDK phosphorylation and proteasomal degradation. KRP2 phosphorylation by the mitotic cell cycle-specific CDKB1;1 kinase suggests a mechanism in which CDKB1;1 controls the level of CDKA;1 activity through regulating KRP2 protein abundance. In accordance with this model, KRP2 protein levels increased in plants with reduced CDKB1;1 activity. Moreover, the proposed model allowed a dynamical simulation of the in vivo observations, validating the sufficiency of the regulatory interactions between CDKA;1, KRP2, and CDKB1;1 in fine-tuning the mitosis-to-endocycle transition.


Asunto(s)
Proteínas de Arabidopsis/metabolismo , Arabidopsis/enzimología , Proteínas de Ciclo Celular/metabolismo , Ciclo Celular/genética , Quinasas Ciclina-Dependientes/metabolismo , Mitosis/genética , Hojas de la Planta/enzimología , Arabidopsis/genética , Arabidopsis/crecimiento & desarrollo , Proteínas de Arabidopsis/genética , Proteínas de Ciclo Celular/genética , Quinasas Ciclina-Dependientes/genética , Regulación Enzimológica de la Expresión Génica/genética , Regulación de la Expresión Génica de las Plantas/genética , Sustancias Macromoleculares/metabolismo , Fosforilación , Hojas de la Planta/genética , Hojas de la Planta/crecimiento & desarrollo , Ploidias , Complejo de la Endopetidasa Proteasomal/metabolismo , Procesamiento Proteico-Postraduccional/genética , Regulación hacia Arriba/genética
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