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1.
Int J Gen Med ; 16: 3219-3227, 2023.
Artículo en Inglés | MEDLINE | ID: mdl-37546240

RESUMEN

Objective: This study aimed to observe the impact of the hospital-community-family integrated nursing paradigm on the compliance, psychological state, and blood lipid levels in patients with hyperlipidemia pancreatitis (HLP). Methods: Totally 66 HLP patients treated in our institution between June 2018 and June 2021 were randomized to Exp group and Con group. The Exp group received the hospital-community-family integrated nursing mode, whereas Con group adopted conventional nursing. Outcome measures included patient compliance, mental state, and blood cholesterol levels. Results: Patients with integrated nursing exhibited markedly higher compliance than those with conventional nursing, as evinced by higher scores of compliance behavior, compliance awareness, medication attitude, and treatment attitude (P < 0.05). Integrated nursing offered more potent mitigation of negative emotions of patients than conventional nursing (P < 0.05). Integrated nursing resulted in better enhanced quality of life of patients versus conventional nursing (P < 0.05). Superior blood lipid amelioration was observed in patients after integration nursing versus those after conventional nursing, demonstrated by a higher serum high-density lipoprotein (HDL) level, and lower levels of triglycerides (TG), cholesterol (TC), and low-density lipoprotein (LDL) (P < 0.05). Patients were more satisfied with integrated nursing (96.97%) than conventional nursing (72.73%), suggesting a high patient acceptance of the nursing mode (P < 0.05). Conclusion: The hospital-community-family integrated nursing model provides a viable alternative to enhance HLP patients' compliance and optimize their psychological state and blood lipid levels, demonstrating good potential for clinical promotion.

2.
Acad Radiol ; 26(2): 147-153, 2019 02.
Artículo en Inglés | MEDLINE | ID: mdl-29908978

RESUMEN

RATIONALE AND OBJECTIVES: This study aimed to preliminarily investigate the feasibility of intravoxel incoherent motion (IVIM) theory in the differential diagnosis of benign and malignant thyroid nodules. MATERIALS AND METHODS: Forty-five patients with 56 confirmed thyroid nodules underwent preoperative routine magnetic resonance imaging and IVIM diffusion-weighted imaging. The histopathologic diagnosis was confirmed by surgery. Apparent diffusion coefficient (ADC), perfusion fraction f, diffusivity D, and pseudo-diffusivity D* were quantified. Independent samples t test of IVIM-derived metrics were conducted between benign and malignant nodules. Receiver-operating characteristic analyses were performed to determine the optimal thresholds as well as the sensitivity and specificity for differentiating. RESULTS: Significant intergroup difference was observed in ADC, D, D*, and f (p < 0.001). Malignant tumors featured significantly lower ADC, D and D* values and a higher f value than that of benign nodules. The ADC, D, and D* could distinguish the benign from malignant thyroid nodules, and parameter f differentiate the malignant tumors from benign nodules. The values of the area under the curve for parameter ADC, D, and D* were 0.784 (p = 0.001), 0.795 (p = 0.001), and 0.850 (p < 0.001), separately, of which the area under the curve of f value was the maximum for identifying the malignant from benign nodules, which was 0.841 (p < 0.001). CONCLUSION: This study suggested that ADC and IVIM-derived metrics, including D, D*, and f, could potentially serve as noninvasive predictors for the preoperative differentiating of thyroid nodules, and f value performed best in identifying the malignant from benign nodules among these parameters.


Asunto(s)
Imagen de Difusión por Resonancia Magnética/métodos , Glándula Tiroides/diagnóstico por imagen , Nódulo Tiroideo , Adulto , Diagnóstico Diferencial , Estudios de Factibilidad , Femenino , Humanos , Aumento de la Imagen/métodos , Masculino , Persona de Mediana Edad , Cuidados Preoperatorios/métodos , Sensibilidad y Especificidad , Nódulo Tiroideo/diagnóstico , Nódulo Tiroideo/patología
3.
J Cell Sci ; 126(Pt 1): 186-95, 2013 Jan 01.
Artículo en Inglés | MEDLINE | ID: mdl-23038776

RESUMEN

Deleted in colorectal cancer (DCC) is a receptor for the axon guidance cues netrin-1 and draxin. The interactions between these guidance cues and DCC play a key role in the development of the nervous system. In the present study, we reveal the crystal structure of the N-terminal four Ig-like domains of DCC. The molecule folds into a horseshoe-like configuration. We demonstrate that this horseshoe conformation of DCC is required for guidance-cue-mediated axonal attraction. Structure-based mutations that disrupt the DCC horseshoe indeed impair its function. A comparison of the DCC horseshoe with previously described horseshoe structures has revealed striking conserved structural features and important sequence signatures. Using these signatures, a genome-wide search allows us to predict the N-terminal horseshoe arrangement in a number of other cell surface receptors, nearly all of which function in the nervous system. The N-terminal horseshoe appears to be evolutionally selected as a platform for neural receptors.


Asunto(s)
Receptores de Superficie Celular/química , Receptores de Superficie Celular/metabolismo , Células Receptoras Sensoriales/metabolismo , Proteínas Supresoras de Tumor/química , Proteínas Supresoras de Tumor/metabolismo , Animales , Axones , Células Cultivadas , Cromatografía en Gel , Cristalografía por Rayos X , Receptor DCC , Embrión de Mamíferos/citología , Inmunohistoquímica , Inmunoprecipitación , Ratones , Ratones Noqueados , Peso Molecular , Estructura Terciaria de Proteína , Células Receptoras Sensoriales/química
4.
FASEB J ; 26(8): 3412-20, 2012 Aug.
Artículo en Inglés | MEDLINE | ID: mdl-22601780

RESUMEN

Developmental endothelial cell locus-1 (Del-1) glycoprotein is secreted by endothelial cells and a subset of macrophages. Del-1 plays a regulatory role in vascular remodeling and functions in innate immunity through interaction with integrin α(V)ß(3). Del-1 contains 3 epidermal growth factor (EGF)-like repeats and 2 discoidin-like domains. An Arg-Gly-Asp (RGD) motif in the second EGF domain (EGF2) mediates adhesion by endothelial cells and phagocytes. We report the crystal structure of its 3 EGF domains. The RGD motif of EGF2 forms a type II' ß turn at the tip of a long protruding loop, dubbed the RGD finger. Whereas EGF2 and EGF3 constitute a rigid rod via an interdomain calcium ion binding site, the long linker between EGF1 and EGF2 lends considerable flexibility to EGF1. Two unique O-linked glycans and 1 N-linked glycan locate to the opposite side of EGF2 from the RGD motif. These structural features favor integrin binding of the RGD finger. Mutagenesis data confirm the importance of having the RGD motif at the tip of the RGD finger. A database search for EGF domain sequences shows that this RGD finger is likely an evolutionary insertion and unique to the EGF domain of Del-1 and its homologue milk fat globule-EGF 8.


Asunto(s)
Secuencias de Aminoácidos , Proteínas Portadoras/química , Integrinas/metabolismo , Oligopéptidos/química , Proteínas de Unión al Calcio , Proteínas Portadoras/metabolismo , Moléculas de Adhesión Celular , Factor de Crecimiento Epidérmico/química , Fucosa/metabolismo , Glicosilación , Células HEK293 , Humanos , Modelos Moleculares , Estructura Terciaria de Proteína
5.
Front Immunol ; 2: 5, 2011.
Artículo en Inglés | MEDLINE | ID: mdl-22566796

RESUMEN

The αß T cell receptor (TCR) is a multimeric complex whose ß chain plays a crucial role in thymocyte development as well as antigen recognition by mature T lymphocytes. We report here crystal structures of individual ß subunits, termed N15ß (Vß5.2Dß2Jß2.6Cß2) and N30ß (Vß13Dß1Jß1.1Cß2), derived from two αß TCRs specific for the immunodominant vesicular stomatitis virus octapeptide (VSV-8) bound to the murine H-2K(b) MHC class I molecule. The crystal packing of the N15ß structure reveals a homodimer formed through two Vß domains. The Vß/Vß module is topologically very similar to the Vα/Vß module in the N15αß heterodimer. By contrast, in the N30ß structure, the Vß domain's external hydrophobic CFG face is covered by the neighboring molecule's Cß domain. In conjunction with systematic investigation of previously published TCR single-subunit structures, we identified several conserved residues forming a concave hydrophobic patch at the center of the CFG outer face of the Vß and other V-type Ig-like domains. This hydrophobic patch is shielded from solvent exposure in the crystal packing, implying that it is unlikely to be thermodynamically stable if exposed on the thymocyte surface. Accordingly, we propose a dimeric pre-TCR model distinct from those suggested previously by others and discuss its functional and structural implications.

6.
Proc Natl Acad Sci U S A ; 106(43): 18345-50, 2009 Oct 27.
Artículo en Inglés | MEDLINE | ID: mdl-19805116

RESUMEN

The activity of integrin LFA-1 (alpha(L)beta(2)) to its ligand ICAM-1 is regulated through the conformational changes of its ligand-binding domain, the I domain of alpha(L) chain, from an inactive, low-affinity closed form (LA), to an intermediate-affinity form (IA), and then finally, to a high-affinity open form (HA). A ligand-mimetic human monoclonal antibody AL-57 (activated LFA-1 clone 57) was identified by phage display to specifically recognize the affinity-upregulated I domain. Here, we describe the crystal structures of the Fab fragment of AL-57 in complex with IA, as well as in its unligated form. We discuss the structural features conferring AL-57's strong selectivity for the high affinity, open conformation of the I domain. The AL-57-binding site overlaps the ICAM-1 binding site on the I domain. Furthermore, an antibody Asp mimics an ICAM Glu by forming a coordination to the metal-ion dependent adhesion site (MIDAS). The structure also reveals better shape complementarity and a more hydrophobic interacting interface in AL-57 binding than in ICAM-1 binding. The results explain AL-57's antagonistic mimicry of LFA-1's natural ligands, the ICAM molecules.


Asunto(s)
Anticuerpos/química , Antígeno-1 Asociado a Función de Linfocito/química , Imitación Molecular , Anticuerpos/inmunología , Cristalografía por Rayos X , Humanos , Ligandos , Antígeno-1 Asociado a Función de Linfocito/inmunología , Modelos Moleculares , Estructura Cuaternaria de Proteína , Estructura Terciaria de Proteína , Ubiquitina/metabolismo
7.
FASEB J ; 23(8): 2735-40, 2009 Aug.
Artículo en Inglés | MEDLINE | ID: mdl-19332643

RESUMEN

Volatile anesthetics (VAs), such as isoflurane, induce a general anesthetic state by binding to specific targets (i.e., ion channels) in the central nervous system (CNS). Simultaneously, VAs modulate immune functions, possibly via direct interaction with alternative targets on leukocytes. One such target, the integrin lymphocyte function-associated antigen-1 (LFA-1), has been shown previously to be inhibited by isoflurane. A better understanding of the mechanism by which isoflurane alters protein function requires the detailed information about the drug-protein interaction at an atomic level. Here, we describe the crystal structure of the LFA-1 ligand-binding domain (I domain) in complex with isoflurane at 1.6 A. We discovered that isoflurane binds to an allosteric cavity previously implicated as critical for the transition of LFA-1 from the low- to the high-affinity state. The isoflurane binding site in the I domain involves an array of amphiphilic interactions, thereby resembling a "common anesthetic binding motif" previously predicted for authentic VA binding sites. These results suggest that the allosteric modulation of protein function by isoflurane, as demonstrated for the integrin LFA-1, might represent a unified mechanism shared by the interactions of volatile anesthetics with targets in the CNS.


Asunto(s)
Anestésicos por Inhalación/química , Anestésicos por Inhalación/farmacología , Isoflurano/química , Isoflurano/farmacología , Antígeno-1 Asociado a Función de Linfocito/química , Antígeno-1 Asociado a Función de Linfocito/efectos de los fármacos , Apoferritinas/química , Sitios de Unión , Cristalografía por Rayos X , Técnicas In Vitro , Modelos Biológicos , Modelos Moleculares , Neuroinmunomodulación/efectos de los fármacos , Estructura Terciaria de Proteína , Estereoisomerismo
8.
Mol Cell ; 31(3): 432-7, 2008 Aug 08.
Artículo en Inglés | MEDLINE | ID: mdl-18691975

RESUMEN

Integrins are cell surface receptors that transduce signals bidirectionally across the plasma membrane. The key event of integrin signaling is the allosteric regulation between its ligand-binding site and the C-terminal helix (alpha7) of integrin's inserted (I) domain. A significant axial movement of the alpha7 helix is associated with the open, active conformation of integrins. We describe the crystal structure of an engineered high-affinity I domain from the integrin alpha(L)beta(2) (LFA-1) alpha subunit in complex with the N-terminal two domains of ICAM-5, an adhesion molecule expressed in telencephalic neurons. The finding that the alpha7 helix swings out and inserts into a neighboring I domain in an upside-down orientation in the crystals implies an intrinsically unusual mobility of this helix. This remarkable feature allows the alpha7 helix to trigger integrin's large-scale conformational changes with little energy penalty. It serves as a mechanistic example of how a weakly bound adhesion molecule works in signaling.


Asunto(s)
Antígeno CD11a/química , Antígeno CD11a/metabolismo , Moléculas de Adhesión Celular/metabolismo , Proteínas Mutantes/química , Proteínas Mutantes/metabolismo , Regulación Alostérica , Animales , Células CHO , Moléculas de Adhesión Celular/química , Cricetinae , Cricetulus , Cristalografía por Rayos X , Modelos Moleculares , Unión Proteica , Estructura Secundaria de Proteína , Estructura Terciaria de Proteína
9.
FASEB J ; 22(10): 3638-47, 2008 Oct.
Artículo en Inglés | MEDLINE | ID: mdl-18614582

RESUMEN

The threat of a pandemic outbreak of influenza virus A H5N1 has become a major concern worldwide. The nucleoprotein (NP) of the virus binds the RNA genome and acts as a key adaptor between the virus and the host cell. It, therefore, plays an important structural and functional role and represents an attractive drug target. Here, we report the 3.3-A crystal structure of H5N1 NP, which is composed of a head domain, a body domain, and a tail loop. Our structure resolves the important linker segments (residues 397-401, 429-437) that connect the tail loop with the remainder of the molecule and a flexible, basic loop (residues 73-91) located in an arginine-rich groove surrounding Arg150. Using surface plasmon resonance, we found the basic loop and arginine-rich groove, but mostly a protruding element containing Arg174 and Arg175, to be important in RNA binding by NP. We also used our crystal structure to build a ring-shaped assembly of nine NP subunits to model the miniribonucleoprotein particle previously visualized by electron microscopy. Our study of H5N1 NP provides insight into the oligomerization interface and the RNA-binding groove, which are attractive drug targets, and it identifies the epitopes that might be used for universal vaccine development.


Asunto(s)
Subtipo H5N1 del Virus de la Influenza A/química , Vacunas contra la Influenza , Nucleoproteínas/química , Proteínas del Núcleo Viral/química , Secuencia de Aminoácidos , Antivirales/química , Antivirales/farmacología , Cristalografía por Rayos X , Diseño de Fármacos , Subtipo H5N1 del Virus de la Influenza A/efectos de los fármacos , Subtipo H5N1 del Virus de la Influenza A/inmunología , Vacunas contra la Influenza/química , Vacunas contra la Influenza/inmunología , Datos de Secuencia Molecular , Nucleoproteínas/efectos de los fármacos , Nucleoproteínas/inmunología , Conformación Proteica , ARN/química , Proteínas del Núcleo Viral/efectos de los fármacos , Proteínas del Núcleo Viral/inmunología
10.
J Mol Biol ; 381(5): 1213-23, 2008 Sep 19.
Artículo en Inglés | MEDLINE | ID: mdl-18602404

RESUMEN

The extracellular matrix protein F-spondin mediates axon guidance during neuronal development. Its N-terminal domain, termed the reelin-N domain, is conserved in F-spondins, reelins, and other extracellular matrix proteins. In this study, a recombinant human reelin-N domain has been expressed, purified, and shown to bind heparin. The crystal structure of the reelin-N domain resolved to 2.0 A reveals a variant immunoglobulin-like fold and potential heparin-binding sites. Substantial conformational variations even in secondary structure are observed between the two chemically identical reelin-N domains in one crystallographic asymmetric unit. The variations may result from extensive, highly specific interactions across the interface of the two reelin-N domains. The calculated values of buried surface area and the interface's shape complementarity are consistent with the formation of a weak dimer. The homophilic asymmetric dimer can potentially offer advantages in binding to ligands such as glycosaminoglycans, which may, in turn, bridge the two reelin-N domains and stabilize the dimer.


Asunto(s)
Moléculas de Adhesión Celular Neuronal/química , Proteínas de la Matriz Extracelular/química , Heparina/metabolismo , Proteínas del Tejido Nervioso/química , Serina Endopeptidasas/química , Secuencia de Aminoácidos , Sitios de Unión , Cristalografía por Rayos X , Dimerización , Humanos , Datos de Secuencia Molecular , Unión Proteica , Estructura Secundaria de Proteína , Estructura Terciaria de Proteína , Proteína Reelina , Alineación de Secuencia , Propiedades de Superficie
11.
Ying Yong Sheng Tai Xue Bao ; 19(3): 494-8, 2008 Mar.
Artículo en Chino | MEDLINE | ID: mdl-18533515

RESUMEN

To make clear whether Mongolian pine (Pinus sylvestris var. mongolica) plantation is limited by soil phosphorus (P) supply in southeast Horqin sand land and to find out the best leaf indicator of soil P supply, the concentrations of total P, inorganic P and organic P in the needles of different age of P. sylvestris var. mongolica and the soil available P were analyzed. The results showed that in the study area, soil available P was rather low (0.12-0.63 mg x kg(-1)), and had significant correlations with the inorganic P (cPi) and total P (cPt) concentrations in the current-year needles of P. sylvestris var. mongolica. The significant correlation between soil available P and needle cPt derived from the significant correlation between cPi and cPt. Compared with cPt, cPi could reflect the level of soil P supply more accurately and directly.


Asunto(s)
Ecosistema , Fósforo/análisis , Pinus/metabolismo , Hojas de la Planta/metabolismo , Suelo/análisis , China , Clima Desértico , Compuestos Orgánicos/análisis , Compuestos Orgánicos/metabolismo , Fósforo/química , Fósforo/metabolismo , Pinus/crecimiento & desarrollo , Hojas de la Planta/crecimiento & desarrollo
12.
J Biol Chem ; 283(7): 3932-41, 2008 Feb 15.
Artículo en Inglés | MEDLINE | ID: mdl-18065761

RESUMEN

Through its interactions with proteins and proteoglycans, thrombospondin-1 (TSP-1) functions at the interface of the cell membrane and the extracellular matrix to regulate matrix structure and cellular phenotype. We have previously determined the structure of the high affinity heparin-binding domain of TSP-1, designated TSPN-1, in association with the synthetic heparin, Arixtra. To establish that the binding of TSPN-1 to Arixtra is representative of the association with naturally occurring heparins, we have determined the structures of TSPN-1 in complex with heparin oligosaccharides containing eight (dp8) and ten (dp10) subunits, by x-ray crystallography. We have found that dp8 and dp10 bind to TSPN-1 in a manner similar to Arixtra and that dp8 and dp10 induce the formation of trans and cis TSPN-1 dimers, respectively. In silico docking calculations partnered with our crystal structures support the importance of arginine residues in positions 29, 42, and 77 in binding sulfate groups of the dp8 and dp10 forms of heparin. The ability of several TSPN-1 domains to bind to glycosaminoglycans simultaneously probably increases the affinity of binding through multivalent interactions. The formation of cis and trans dimers of the TSPN-1 domain with relatively short segments of heparin further enhances the ability of TSP-1 to participate in high affinity binding to glycosaminoglycans. Dimer formation may also involve TSPN-1 domains from two separate TSP-1 molecules. This association would enable glycosaminoglycans to cluster TSP-1.


Asunto(s)
Heparina/química , Trombospondina 1/metabolismo , Cromatografía en Gel , Cristalización , Cristalografía por Rayos X , Dimerización , Humanos , Modelos Moleculares , Conformación Proteica , Proteínas Recombinantes/química , Proteínas Recombinantes/metabolismo , Trombospondina 1/química
13.
J Mol Biol ; 373(2): 401-11, 2007 Oct 19.
Artículo en Inglés | MEDLINE | ID: mdl-17850815

RESUMEN

Cell adhesion mediated by type I cadherins involves homophilic "trans" interactions that are thought to be brought about by a strand exchange mechanism involving the N-terminal extracellular domain. Here, we present the high-resolution crystal structure of the N-terminal two domains of human E-cadherin. Comparison of this structure with other type I cadherin structures reveals features that are likely to be critical to facilitate dimerization by strand exchange as well as dimer flexibility. We integrate this structural knowledge to provide a model for type I cadherin adhesive interactions. Intra-molecular docking of the conserved N-terminal "adhesion arm" into the acceptor pocket in monomeric E-cadherin appears largely identical to inter-molecular docking of the adhesion arm in adhesive trans dimers. A strained conformation of the adhesion arm in the monomer, however, may create an equilibrium between "open" and "closed" forms that primes the cadherin for formation of adhesive interactions, which are then stabilized by additional dimer-specific contacts. By contrast, in type II cadherins, strain in the adhesion arm appears absent and a much larger surface area is involved in trans adhesion, which may compensate the activation energy required to peel off the intra-molecularly docked arm. It seems that evolution has selected slightly different adhesion mechanisms for type I and type II cadherins.


Asunto(s)
Cadherinas/química , Adhesión Celular , Cristalografía por Rayos X , Dimerización , Humanos , Modelos Biológicos , Modelos Moleculares , Conformación Proteica , Estructura Terciaria de Proteína , Relación Estructura-Actividad
14.
Nature ; 449(7161): 487-91, 2007 Sep 27.
Artículo en Inglés | MEDLINE | ID: mdl-17721508

RESUMEN

The Dscam gene gives rise to thousands of diverse cell surface receptors thought to provide homophilic and heterophilic recognition specificity for neuronal wiring and immune responses. Mutually exclusive splicing allows for the generation of sequence variability in three immunoglobulin ecto-domains, D2, D3 and D7. We report X-ray structures of the amino-terminal four immunoglobulin domains (D1-D4) of two distinct Dscam isoforms. The structures reveal a horseshoe configuration, with variable residues of D2 and D3 constituting two independent surface epitopes on either side of the receptor. Both isoforms engage in homo-dimerization coupling variable domain D2 with D2, and D3 with D3. These interactions involve symmetric, antiparallel pairing of identical peptide segments from epitope I that are unique to each isoform. Structure-guided mutagenesis and swapping of peptide segments confirm that epitope I, but not epitope II, confers homophilic binding specificity of full-length Dscam receptors. Phylogenetic analysis shows strong selection of matching peptide sequences only for epitope I. We propose that peptide complementarity of variable residues in epitope I of Dscam is essential for homophilic binding specificity.


Asunto(s)
Proteínas de Drosophila/química , Proteínas de Drosophila/metabolismo , Drosophila melanogaster , Empalme Alternativo , Secuencia de Aminoácidos , Animales , Sitios de Unión , Moléculas de Adhesión Celular , Cristalografía por Rayos X , Dimerización , Proteínas de Drosophila/genética , Drosophila melanogaster/química , Drosophila melanogaster/genética , Exones , Modelos Moleculares , Datos de Secuencia Molecular , Isoformas de Proteínas/química , Isoformas de Proteínas/genética , Isoformas de Proteínas/metabolismo , Estructura Cuaternaria de Proteína , Estructura Terciaria de Proteína , Relación Estructura-Actividad , Especificidad por Sustrato
15.
Structure ; 14(1): 33-42, 2006 Jan.
Artículo en Inglés | MEDLINE | ID: mdl-16407063

RESUMEN

The N-terminal domain of thrombospondin-1 (TSPN-1) mediates the protein's interaction with (1) glycosaminoglycans, calreticulin, and integrins during cellular adhesion, (2) low-density lipoprotein receptor-related protein during uptake and clearance, and (3) fibrinogen during platelet aggregation. The crystal structure of TSPN-1 to 1.8 A resolution is a beta sandwich with 13 antiparallel beta strands and 1 irregular strand-like segment. Unique structural features of the N- and C-terminal regions, and the disulfide bond location, distinguish TSPN-1 from the laminin G domain and other concanavalin A-like lectins/glucanases superfamily members. The crystal structure of the complex of TSPN-1 with heparin indicates that residues R29, R42, and R77 in an extensive positively charged patch at the bottom of the domain specifically associate with the sulfate groups of heparin. The TSPN-1 structure and identified adjacent linker region provide a structural framework for the analysis of the TSPN domain of various molecules, including TSPs, NELLs, many collagens, TSPEAR, and kielin.


Asunto(s)
Fragmentos de Péptidos/química , Polisacáridos/síntesis química , Trombospondina 1/química , Secuencia de Aminoácidos , Sitios de Unión , Concanavalina A/química , Cristalización , Cristalografía por Rayos X , Fondaparinux , Humanos , Datos de Secuencia Molecular , Estructura Secundaria de Proteína , Estructura Terciaria de Proteína , Alineación de Secuencia , Homología Estructural de Proteína
16.
Immunity ; 23(6): 661-71, 2005 Dec.
Artículo en Inglés | MEDLINE | ID: mdl-16356863

RESUMEN

The crystal structure of a recombinant mouse single chain CD8alphabeta ectodomains at 2.4 A resolution reveals paired immunoglobulin variable region-like domains with a striking resemblance to CD8alphaalpha in size, shape, and surface electrostatic potential of complementarity-determining regions (CDR), despite <20% sequence identity between the CD8alpha and CD8beta subunits. Unlike the CD8alpha subunit(s) in the heterodimer or homodimer, the CDR1 loop of CD8beta tilts away from its corresponding CDR2 and CDR3 loops. Consistent with this observation, independent mutational studies reveal that alanine substitutions of residues in the CDR1 loop of CD8beta have no effect on CD8alphabeta coreceptor function, whereas mutations in CD8beta CDR2 and CDR3 loops abolish CD8alphabeta coreceptor activity. The implications of these findings and additional CD8alpha mutational studies for CD8alphabeta- versus CD8alphaalpha-MHCI binding are discussed.


Asunto(s)
Antígenos CD8/química , Antígenos CD8/genética , Modelos Moleculares , Secuencia de Aminoácidos , Animales , Antígenos CD8/metabolismo , Cristalización , Análisis Mutacional de ADN , Dimerización , Ratones , Datos de Secuencia Molecular , Alineación de Secuencia , Análisis de Secuencia de ADN , Electricidad Estática
17.
Proc Natl Acad Sci U S A ; 102(9): 3366-71, 2005 Mar 01.
Artículo en Inglés | MEDLINE | ID: mdl-15728350

RESUMEN

Within the Ig superfamily (IgSF), intercellular adhesion molecules (ICAMs) form a subfamily that binds the leukocyte integrin alphaLbeta2. We report a 1.65-A-resolution crystal structure of the ICAM-3 N-terminal domain (D1) in complex with the inserted domain, the ligand-binding domain of alphaLbeta2. This high-resolution structure and comparisons among ICAM subfamily members establish that the binding of ICAM-3 D1 onto the inserted domain represents a common docking mode for ICAM subfamily members. The markedly different off-rates of ICAM-1, -2, and -3 appear to be determined by the hydrophobicity of residues that surround a metal coordination bond in the alphaLbeta2-binding interfaces. Variation in composition of glycans on the periphery of the interfaces influences on-rate.


Asunto(s)
Antígenos CD/metabolismo , Antígeno-1 Asociado a Función de Linfocito/metabolismo , Secuencia de Aminoácidos , Antígenos CD/química , Sitios de Unión , Moléculas de Adhesión Celular , Antígeno-1 Asociado a Función de Linfocito/química , Modelos Moleculares , Datos de Secuencia Molecular , Homología de Secuencia de Aminoácido , Resonancia por Plasmón de Superficie
18.
J Mol Biol ; 345(5): 1099-110, 2005 Feb 04.
Artículo en Inglés | MEDLINE | ID: mdl-15644207

RESUMEN

Cytotoxic T lymphocyte (CTL) responses against influenza A virus in C57BL/6 mice are dominated by a small number of viral peptides among many that are capable of binding to major histocompatibility complex (MHC) class I molecules. The basis of this limited immune recognition is unknown. Here, we present X-ray structures of MHC class I molecules in complex with two immunodominant epitopes (PA(224-233)/D(b) and PB1(703-711)/K(b)) and one non-immunogenic epitope (HA(468-477)/D(b)) of the influenza A virus. The immunodominant peptides are each characterized by a bulge at the C terminus, lifting P6 and P7 residues out of the MHC groove, presenting featured structural elements to T-cell receptors (TCRs). Immune recognition of PA(224-233)/D(b) will focus largely on the exposed P7 arginine residue. In contrast, the non-immunogenic HA(468-477) peptide lacks prominent features in this C-terminal bulge. In the K(b)-bound PB1(703-711) epitope, the bulge results from a non-canonical binding motif, such that the mode of presentation of this peptide strongly resembles that of D(b)-bound peptides. Given that PA(224-233)/D(b), PB1(703-711)/K(b) and the previously defined NP(366-374)/D(b) epitopes dominate the primary response to influenza A virus in C57BL/6 mice, our findings indicate that residues of the C-terminal bulge are important in selection of the immunodominant CTL repertoire.


Asunto(s)
Epítopos de Linfocito T/química , Antígenos H-2/química , Antígenos H-2/inmunología , Epítopos Inmunodominantes/química , Virus de la Influenza A/inmunología , Receptores de Antígenos de Linfocitos T/inmunología , Linfocitos T Citotóxicos/inmunología , Secuencia de Aminoácidos , Animales , Sitios de Unión , Cristalografía por Rayos X , Virus de la Influenza A/química , Ratones , Modelos Moleculares , Datos de Secuencia Molecular , Estructura Terciaria de Proteína , Receptores de Antígenos de Linfocitos T/química , Propiedades de Superficie
19.
Mol Cell ; 14(2): 269-76, 2004 Apr 23.
Artículo en Inglés | MEDLINE | ID: mdl-15099525

RESUMEN

We have determined the 3.0 A crystal structure of the three C-terminal domains 3-5 (D3-D5) of ICAM-1. Combined with the previously known N-terminal two-domain structure (D1D2), a model of an entire ICAM-1 extracellular fragment has been constructed. This model should represent a general architecture of other ICAM family members, particularly ICAM-3 and ICAM-5. The observed intimate dimerization interaction at D4 and a stiff D4-D5 stem-like architecture provide a good structural explanation for the existence of preformed ICAM-1 cis dimers on the cell membrane. Together with another dimerization interface at D1, a band-like one-dimensional linear cluster of ICAM-1 on an antigen-presenting cell (APC) surface can be envisioned, which might explain the formation of an immunological synapse between an activated T cell and APC which is critical for T cell receptor signaling.


Asunto(s)
Membrana Celular/metabolismo , Molécula 1 de Adhesión Intercelular/química , Secuencia de Aminoácidos , Animales , Sitios de Unión , Células CHO , Membrana Celular/química , Secuencia Conservada , Cricetinae , Cricetulus , Cristalografía por Rayos X , Dimerización , Disulfuros , Glicosilación , Interacciones Hidrofóbicas e Hidrofílicas , Integrinas/metabolismo , Modelos Moleculares , Datos de Secuencia Molecular , Estructura Secundaria de Proteína , Estructura Terciaria de Proteína , Homología de Secuencia de Aminoácido
20.
Nature ; 424(6951): 969-74, 2003 Aug 21.
Artículo en Inglés | MEDLINE | ID: mdl-12931195

RESUMEN

Basement membranes are fundamental to tissue organization and physiology in all metazoans. The interaction between laminin and nidogen is crucial to the assembly of basement membranes. The structure of the interacting domains reveals a six-bladed Tyr-Trp-Thr-Asp (YWTD) beta-propeller domain in nidogen bound to laminin epidermal-growth-factor-like (LE) modules III3-5 in laminin (LE3-5). Laminin LE module 4 binds to an amphitheatre-shaped surface on the pseudo-6-fold axis of the beta-propeller, and LE module 3 binds over its rim. A Phe residue that shutters the water-filled central aperture of the beta-propeller, the rigidity of the amphitheatre, and high shape complementarity enable the construction of an evolutionarily conserved binding surface for LE4 of unprecedentedly high affinity for its small size. Hypermorphic mutations in the Wnt co-receptor LRP5 (refs 6-9) suggest that a similar YWTD beta-propeller interface is used to bind ligands that function in developmental pathways. A related interface, but shifted off-centre from the pseudo-6-fold axis and lacking the shutter over the central aperture, is used in the low-density lipoprotein receptor for an intramolecular interaction that is regulated by pH in receptor recycling.


Asunto(s)
Laminina/química , Laminina/metabolismo , Glicoproteínas de Membrana/química , Glicoproteínas de Membrana/metabolismo , Fragmentos de Péptidos/metabolismo , Secuencias de Aminoácidos , Secuencia de Aminoácidos , Animales , Membrana Basal , Sitios de Unión , Línea Celular , Secuencia Conservada , Humanos , Concentración de Iones de Hidrógeno , Laminina/genética , Glicoproteínas de Membrana/genética , Ratones , Modelos Moleculares , Datos de Secuencia Molecular , Mutación , Fragmentos de Péptidos/química , Fragmentos de Péptidos/genética , Estructura Terciaria de Proteína , Alineación de Secuencia
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