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1.
Genet Mol Res ; 15(3)2016 Aug 12.
Artículo en Inglés | MEDLINE | ID: mdl-27525934

RESUMEN

The domesticated apple (Malus x domestica Borkh.) is a major fruit crop of temperate regions of the world. 'Fuji' apple (Ralls Genet x Delicious), a famous apple cultivar in Korea, has been very popular since its promotion in Japan in 1958. 'Fuji' and its bud mutant cultivars possess variable levels of genetic diversity. Nonetheless, the phenotypes of each group, which are classified into the bud mutation groups: early season, fruiting spur, and coloring, are similar. Despite attempts to identify these bud mutation cultivars, molecular markers, which were developed before the emergence of next-generation sequencing technology, have not been able to distinguish each cultivar easily. In this study, we adopted the resequencing technique using the 'Golden Delicious' (Grimes Golden x Unknown) apple genome as a reference. SNPs (single nucleotide polymorphisms) and InDels (insertions or deletions) of 'Fuji' apple and its bud mutant cultivar were detected and SNPs and unique InDels distinct to each cultivar were identified. Data from this study may be used to identify bud mutant cultivars of 'Fuji' apples and be useful for further breeding of apples.


Asunto(s)
Frutas/genética , Malus/genética , ADN de Plantas/genética , Regulación de la Expresión Génica de las Plantas , Genes de Plantas , Estudios de Asociación Genética , Secuenciación de Nucleótidos de Alto Rendimiento , Mutación INDEL , Fitomejoramiento , Proteínas de Plantas/genética , Polimorfismo de Nucleótido Simple , Análisis de Secuencia de ADN
2.
Ann Rheum Dis ; 67(10): 1480-7, 2008 Oct.
Artículo en Inglés | MEDLINE | ID: mdl-17998215

RESUMEN

OBJECTIVES: MUC5B contains sulfated and sialylated oligosaccharides that sequester water required for moisturising the oral mucosa. Xerostomia, in patients with Sjögren syndrome, is generally associated with reduced quantities, rather than altered properties, of saliva. Here, we determined the amount of MUC5B (mRNA and protein) as well as sulfation levels in salivary glands of patients with normal or altered unstimulated salivary flow. Localisation of MUC5B and sulfated MUC5B, as well as total levels sulfated groups were determined and compared with acini basal lamina disorganisation. PATIENTS AND METHODS: In all, 18 patients with normal or altered unstimulated salivary flow and 16 controls were studied. MUC5B mRNA and protein were evaluated in salivary glands by semiquantitative RT-PCR and Western blot analysis. MUC5B sulfation was determined by Western blotting. MUC5B and sulfo-Lewis(a) antigen localisation were assessed by immunohistochemistry. The total amount of sulfated oligosaccharides was determined microdensitometrically. RESULTS: No significant differences were detected in MUC5B mRNA and protein levels between controls and patients, while sulfo-Lewis(a) antigen levels were lower in patients. The number of sulfo-Lewis(a) positive mucous acini was reduced in patients but no correlation was observed between lower levels of sulfation and unstimulated salivary flow. Microdensitometric data confirmed the presence of reduced sulfated oligosaccharides levels in mucous acini from patients with highly disorganised basal lamina. CONCLUSION: Disorganisation of the basal lamina observed in patients with Sjögren syndrome may lead to dedifferentiation of acinar mucous cells and, as a consequence, alter sulfation of MUC5B. These changes are suggested to represent a novel mechanism that may explain xerostomia in these patients.


Asunto(s)
Mucinas/metabolismo , Síndrome de Sjögren/metabolismo , Xerostomía/metabolismo , Adulto , Densitometría , Femenino , Expresión Génica , Humanos , Antígenos del Grupo Sanguíneo de Lewis , Persona de Mediana Edad , Mucina 5B , Mucinas/genética , Oligosacáridos/metabolismo , ARN Mensajero/genética , Glándulas Salivales/metabolismo , Salivación , Sulfatos/metabolismo
3.
Ann Rheum Dis ; 65(2): 178-83, 2006 Feb.
Artículo en Inglés | MEDLINE | ID: mdl-16014676

RESUMEN

OBJECTIVE: To study the expression of laminin and type IV collagen as biomarkers of the organisation of the basal lamina of acini and ducts in labial salivary glands from patients with Sjögren's syndrome, and to relate this organisation to inflammatory cell invasion of acini and ducts. METHODS: Immunohistochemistry for laminin and type IV collagen was undertaken on sections of labial salivary glands from 30 patients with Sjögren's syndrome, 10 control subjects, and 24 controls with chronic sialoadenitis. Immunohistochemistry reaction, alterations to cell morphology, and the presence of inflammatory cells in acini and ducts were evaluated and scored using a semiquantitative method. RESULTS: Changes in the expression of laminin and type IV collagen in the basal lamina of acini and ducts of labial salivary glands from patients with Sjögren's syndrome were more pronounced than in labial salivary glands from control groups. A remarkable characteristic was the disorganisation of the basal lamina in the labial salivary glands in Sjögren's syndrome. The pattern of immunoreactivity of the basal lamina of other structures (for example, blood vessels) did not change. In Sjögren's syndrome, invasion of cytotoxic T lymphocytes was only observed in acini and ducts which had a disorganised basal lamina. CONCLUSIONS: The high state of disorganisation of the basal lamina of acini and ducts could allow invasion of cytotoxic T lymphocytes in Sjögren's syndrome, contributing to cell death and ductal hyperplasia.


Asunto(s)
Membrana Basal/patología , Labio , Glándulas Salivales Menores/patología , Síndrome de Sjögren/patología , Adulto , Membrana Basal/inmunología , Biomarcadores/análisis , Estudios de Casos y Controles , Enfermedad Crónica , Colágeno Tipo IV/análisis , Femenino , Humanos , Inmunohistoquímica/métodos , Laminina/análisis , Masculino , Persona de Mediana Edad , Conductos Salivales/inmunología , Conductos Salivales/patología , Glándulas Salivales Menores/inmunología , Sialadenitis/inmunología , Sialadenitis/patología , Síndrome de Sjögren/inmunología , Linfocitos T Citotóxicos/inmunología
4.
J Pediatr ; 139(1): 100-4, 2001 Jul.
Artículo en Inglés | MEDLINE | ID: mdl-11445801

RESUMEN

OBJECTIVE: The objective was to investigate the role of Helicobacter pylori infection in iron-deficiency anemia (IDA) of pubescent athletes. STUDY DESIGN: Blood sampling and a questionnaire survey were performed on 440 regular high school students and 220 athletes of a physical education high school. Hemoglobin, serum iron, total iron-binding capacity, ferritin, and immunoglobulin G antibody to H. pylori were measured to compare the prevalence of IDA and H. pylori infection in the groups. Nutritional analysis and a questionnaire survey for socioeconomic status were undertaken to compare and control for other risk factors that might influence IDA and H. pylori infection in the groups. In those with IDA coexistent with H. pylori infection, we also determined whether IDA can be managed by H pylori eradication. RESULTS: The prevalence rates of IDA, H pylori infection, and H. pylori -associated IDA in female athletes were higher than in the control group. The relative risk of IDA was 2.9 (95% CI, 1.5 to 5.6) for those with H. pylori infection. Athletes who exhibited H. pylori -associated IDA showed significant increases in hemoglobin, iron, and ferritin levels after H. pylori eradication. The subjects in the control group who were treated orally with iron alone showed no significant changes. CONCLUSION: Adolescent female athletes may have development of H. pylori -associated IDA, which can be managed by H. pylori eradication.


Asunto(s)
Anemia Ferropénica/microbiología , Infecciones por Helicobacter/complicaciones , Helicobacter pylori , Deportes , Adolescente , Anemia Ferropénica/epidemiología , Estudios de Casos y Controles , Quimioterapia Combinada , Femenino , Infecciones por Helicobacter/tratamiento farmacológico , Infecciones por Helicobacter/epidemiología , Humanos , Masculino , Estado Nutricional , Prevalencia , Factores de Riesgo , Factores Socioeconómicos , Encuestas y Cuestionarios
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