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1.
Dalton Trans ; 51(41): 15816-15829, 2022 Oct 25.
Artículo en Inglés | MEDLINE | ID: mdl-36189684

RESUMEN

High-level computational data for standard gas phase enthalpies of formation, entropies, and heat capacities are reported for 116 compounds of boron. A comparison of the results with extant experimental and computational benchmark values reveals important trends and clear outliers. Recommendations are made to revise some of the key quantities, such as the enthalpies of formation of orthoboric acid, trimethylthioborate, and triphenylborane, the last of which is found to be considerably in error. The uncertainties associated with the experimental values are found to exceed those of high-level calculations by a clear margin, prompting the redetermination of Benson group additivity contributions for boron-based groups on purely computational grounds. The applicability of the established group contribution values is demonstrated by estimating thermochemical data for large organoboron compounds that cannot be treated with high-level quantum chemical methods and comparing the results with existing experimental and computational values.

3.
J Phys Chem A ; 126(10): 1729-1742, 2022 Mar 17.
Artículo en Inglés | MEDLINE | ID: mdl-35254831

RESUMEN

A high-level composite quantum chemical method, W1X-1, is used herein to calculate the gas-phase standard enthalpy of formation, entropy, and heat capacity of 159 organosilicon compounds. The results set a new benchmark in the field that allows, for the first time, an in-depth assessment of existing experimental data on standard enthalpies of formation, enabling the identification of important trends and possible outliers. The calculated thermochemical data are used to determine Benson group additivity contributions for 60 Benson groups and group pairs involving silicon. These values allow fast and accurate estimation of thermochemical parameters of organosilicon compounds of varying complexity, and the data acquired are used to assess the reliability of experimental work of Voronkov et al. that has been repeatedly criticized by Becerra and Walsh. Recent results from other computational investigations in the field are also carefully discussed through the prism of reported advancements.

4.
Molecules ; 24(13)2019 Jul 08.
Artículo en Inglés | MEDLINE | ID: mdl-31288375

RESUMEN

Ureido-N-iso-propyl,N'-4-(3-pyridin-2-one)pyrimidine (1) and its 2-methoxy pyridine derivative (1Me) has been designed and prepared. The conformational equilibrium in urea moiety and tautomerism in the pyrimidine part have been investigated by variable temperature and 1H NMR titrations as well as DFT quantum chemical calculations. The studied compounds readily associate by triple hydrogen bonding with 2-aminonaphthyridine (A) and/or 2,6-bis(acetylamino)pyridine (B). In 1, the proton is forced to 1,3-tautomeric shift upon stimuli and keeps it position, even when one of the partners in the complex was replaced by another molecule. The observed tautomerism controlled by conformational state (kinetic trapping effect) opens new possibilities in molecular sensing that are based on the fact that reverse reaction is not preferred.


Asunto(s)
Pirimidinas/síntesis química , Urea/análogos & derivados , Urea/síntesis química , Catálisis , Enlace de Hidrógeno , Isomerismo , Cinética , Conformación Molecular , Protones , Teoría Cuántica , Temperatura , Termodinámica
5.
J Comput Chem ; 40(3): 572-580, 2019 Jan 30.
Artículo en Inglés | MEDLINE | ID: mdl-30575086

RESUMEN

Composite quantum chemical methods W1X-1 and CBS-QB3 are used to calculate the gas phase standard enthalpy of formation, entropy, and heat capacity of 38 phosphines and phosphine oxides for which reliable experimental thermochemical information is limited or simply nonexistent. For alkyl phosphines and phosphine oxides, the W1X-1, and CBS-QB3 results are mutually consistent and in excellent agreement with available G3X values and empirical data. In the case of aryl-substituted species, different computational methods show more variation, with G3X enthalpies being furthest from experimental values. The calculated thermochemical data are subsequently used to determine Benson group additivity contributions for 24 Benson groups and group pairs involving phosphorus, thereby allowing fast and accurate estimations of thermochemical data of many organophosphorus compounds of any complexity. Such data are indispensable, for example, in chemical process design or estimating potential hazards of new chemical compounds. © 2018 Wiley Periodicals, Inc.

6.
Steroids ; 117: 90-96, 2017 01.
Artículo en Inglés | MEDLINE | ID: mdl-27425639

RESUMEN

Supramolecular characteristics of two spermine amides of betulinic acid (1 and 2) were studied by measuring and evaluating their UV-VIS-NIR spectra in aqueous acetonitrile and DOSY-NMR spectra in tetradeuteromethanol, accompanied by atomic force microscopy (AFM) images, scanning electron microscopy (SEM) micrographs, and transmission electron microscopy (TEM) micrographs. Fibrous supramolecular self-assembly of 1 and 2 was observed by AFM images, as well as by the SEM and TEM micrographs. Bathochromic shifts of the absorbance maximum at 870nm to 1015-970nm in the UV-VIS-NIR spectra were observed with increasing water content in the acetonitrile/water systems, indicating formation of fibrous J-type aggregates. Variable temperature DOSY-NMR spectral measurement showed non-linear dependence that also suggests self-assembly behavior of the studied systems. Chiral supramolecular structures were formed by self-assembling due to the chirality of the monomeric molecules. Application of aqueous media during self-assembly procedures is an important factor in the development of targeted drug delivery systems.


Asunto(s)
Amidas/química , Espermina/química , Triterpenos/química , Espectroscopía de Resonancia Magnética , Microscopía de Fuerza Atómica , Microscopía Electroquímica de Rastreo , Microscopía Electrónica de Transmisión , Estructura Molecular , Triterpenos Pentacíclicos , Ácido Betulínico
7.
Gels ; 2(1)2016 Mar 02.
Artículo en Inglés | MEDLINE | ID: mdl-30674141

RESUMEN

Caffeine (a stimulant) and ethanol (a depressant) may have opposite effects in our body, but under in vitro conditions they can "gel" together. Caffeine, being one of the widely used stimulants, continued to surprise the scientific community with its unprecedented biological, medicinal and physicochemical properties. Here, we disclose the supramolecular self-assembly of anhydrous caffeine in a series of alcoholic and aromatic solvents, rendering a highly entangled microcrystalline network facilitating the encapsulation of the solvents as illustrated using direct imaging, microscopy analysis and NMR studies.

8.
Beilstein J Org Chem ; 11: 2105-16, 2015.
Artículo en Inglés | MEDLINE | ID: mdl-26664631

RESUMEN

The association of substituted benzoates and naphthyridine dianions was used to study the complexation of dibutyltriuret. The title molecule is the simplest molecule able to form two intramolecular hydrogen bonds. The naphthyridine salt was used to break two intramolecular hydrogen bonds at a time while with the use of substituted benzoates the systematic approach to study association was achieved. Both, titrations and variable temperature measurements shed the light on the importance of conformational equilibrium and its influence on association in solution. Moreover, the associates were observed by mass spectrometry. The DFT-based computations for complexes and single bond rotational barriers supports experimental data and helps understanding the properties of multiply hydrogen bonded complexes.

9.
J Syst Chem ; 6(1): 2, 2015.
Artículo en Inglés | MEDLINE | ID: mdl-25904989

RESUMEN

Vitalism was abandoned already for a long time ago, yet the impression that animate beings differ in some fundamental way from inanimate objects continues to thrive. Here, we argue that scale free patterns, found throughout nature, present convincing evidence that this demarcation is only imaginary. Therefore, all systems ought to be regarded alike, i.e., all are consuming free energy in least time. This way evolutionary processes can be understood as a series of changes from one state to another, so that flows of energy themselves naturally select those ways and means, such as species and societies or gadgets and galaxies to consume free energy in the least time in quest of attaining thermodynamic balance in respective surroundings. This holistic worldview, albeit an accurate account of nature, was shelved soon after its advent at the turn of the 18th century, because the general tenet did not meet that time expectations of a deterministic law, but now it is time to reconsider the old universal imperative against observations rather than expectations.

10.
J Org Chem ; 80(4): 2072-80, 2015 Feb 20.
Artículo en Inglés | MEDLINE | ID: mdl-25633740

RESUMEN

A series of 1-benzoylmethyleneisoquinoline difluoroborates were synthesized, and their photophysical properties were determined. The effect of the substituent and benzoannulation on their properties was investigated to make a comparison with recently published results focused on related quinolines. The photophysical properties of isoquinoline derivatives differ from those of quinolines, and the most pronounced differences are found for the fluorescence quantum yields. Both experimental and theoretical approaches were used to explain the observed photophysical properties.

11.
Magn Reson Chem ; 53(4): 256-60, 2015 Apr.
Artículo en Inglés | MEDLINE | ID: mdl-25631685

RESUMEN

Herein, we present the results obtained from our studies on supramolecular self-assembly and molecular mobility of low-molecular-weight gelators (LMWGs) in organic solvents using pulsed field gradient (PFG) diffusion ordered spectroscopy (DOSY) NMR. A series of concentration-dependent DOSY NMR experiments were performed on selected LMWGs to determine the critical gelation concentration (CGC) as well as to understand the behaviour of the gelator molecules in the gel state. In addition, variable-temperature DOSY NMR experiments were performed to determine the gel-to-sol transition. The PFG NMR experiments performed as a function of gradient strength were further analyzed using monoexponential DOSY processing, and the results were compared with the automated Bayesian DOSY transformation to obtain 2D plots. Our results provide useful information on the stepwise self-assembly of small molecules leading to gelation. We believe that the results obtained from these experiments are applicable in determining the CGC and gel melting temperatures of supramolecular gels.


Asunto(s)
Colatos/síntesis química , Geles/síntesis química , Colatos/química , Geles/química , Espectroscopía de Resonancia Magnética , Estructura Molecular , Peso Molecular
12.
Chemistry ; 19(39): 12978-81, 2013 Sep 23.
Artículo en Inglés | MEDLINE | ID: mdl-24038302

RESUMEN

1-2-3 gel! Subcomponent self-assembly is introduced as a new design route towards multistimuli-responsive metallogels. It offers a rapid and facile access to supramolecular gels and allows to design smart materials with diverse functional and structural properties by simply exchanging one (or more) of the components. Herein, the exchange of the metal ions is emphasized (see scheme).

13.
J Org Chem ; 78(15): 7582-93, 2013 Aug 02.
Artículo en Inglés | MEDLINE | ID: mdl-23845101

RESUMEN

Association of four N-(pyridin-2-yl),N'-R(1)-ureas (R(1) = ethyl, n-butyl, phenyl, and tert-butyl) with substituted 2-amino-1,8-naphthyridines and benzoates were studied by (1)H NMR spectroscopic titrations and quantum chemical calculations. The benzoates and 2-amino-1,8-naphthyridines were selected as representatives of double and triple hydrogen bonding counterparts, respectively. The classical substituent effect on the association was studied. A prerequisite and a crucial step for the complex formation was the breaking of the intramolecular hydrogen bond in urea derivatives. The QTAIM calculation method was employed to explain the hydrogen bonding within complexes. In the case of benzoates carrying an electron-donating substituent the experimental findings were explained by the formation of two complexes. These observations were rationalized by the electronic repulsions between atoms in a close proximity and further verified by calculations. Single-crystal X-ray diffraction was used to confirm the structure of studied ureas in the crystalline state. These results are in line with the solution studies of self-association of ureas.


Asunto(s)
Benzoatos/química , Naftiridinas/química , Teoría Cuántica , Urea/química , Enlace de Hidrógeno , Espectroscopía de Resonancia Magnética , Estructura Molecular , Urea/análogos & derivados
14.
Org Biomol Chem ; 11(28): 4585-90, 2013 Jul 28.
Artículo en Inglés | MEDLINE | ID: mdl-23774968

RESUMEN

Receptor 1, composed of two deoxycholic acid moieties appended to a Zn-salophen complex, was prepared, characterized and tested for anion binding by (1)H NMR and UV-vis spectroscopic techniques. While in polar DMSO, 1 is able to bind phosphate (K = ∼700 M(-1)), the addition of water severely diminishes the association. In a 1 : 9 water-DMSO mixture, the binding constant K is only ca. 20 M(-1). Notably, in an aqueous solution of CTABr micelles (CTABr 10 mM, cmc = ∼1 mM), the zinc-salophen conjugate 1, due to its two non-polar bile-acid moieties, becomes solubilized and, most importantly, it almost completely recovers its binding ability towards phosphate, displaying a remarkable affinity (K = ∼450 M(-1)) in water.

15.
Biomacromolecules ; 14(5): 1547-54, 2013 May 13.
Artículo en Inglés | MEDLINE | ID: mdl-23506469

RESUMEN

The classic nanocomposite approach aims at percolation of low fraction of exfoliated individual reinforcing nanoscale elements within a polymeric matrix. By contrast, many of the mechanically excellent biological nanocomposites involve self-assembled and space-filled structures of hard reinforcing and soft toughening domains, with high weight fraction of reinforcements. Here we inspect a new concept toward mimicking such structures by studying whether percolation of intercalated domains consisting of alternating rigid and reinforcing, and soft rubbery domains could allow a transition to a reinforced state. Toward that, we present the functionalization of rigid native cellulose nanocrystals (CNCs) by esterification with a dense hydrocarbon chain brush containing cross-linkable double bonds. Composite films with 0-80 wt % of such modified CNCs (mCNCs) within a poly(butadiene) (PBD) rubber matrix were prepared via cross-linking by UV-light initiated thiol-ene click reaction. Transmission electron microscopy showed structures at two length scales, where the mCNCs and PBD form domains having internal aligned self-assemblies of alternating hard mCNCs and soft PBD with periodicity of ca. 40 nm, and where additional PBD connects such domains. Increasing the weight fraction of mCNCs causes an uncommon abrupt transition from PBD-dominated soft materials to significantly reinforced mCNC-dominated mechanical properties, suggesting that the intercalated self-assembled mCNC/PBD domains percolate in PBD upon passing 30-35 wt % of mCNCs. Maximum stress of 16 MPa at mCNC fraction of 80 wt % was obtained. The mechanical properties of the composites show exceptional insensitivity to air humidity. The shown simple concept of percolative intercalated nanocomposites suggests searching for more general biomimetic compositions involving several deformation mechanisms for improved mechanical properties.


Asunto(s)
Butadienos/química , Celulosa/química , Química Clic , Elastómeros/química , Nanocompuestos/química , Nanopartículas/química , Celulosa/ultraestructura , Microscopía Electrónica de Rastreo , Nanocompuestos/ultraestructura , Nanopartículas/ultraestructura , Compuestos de Sulfhidrilo/química , Propiedades de Superficie , Resistencia a la Tracción , Rayos Ultravioleta
16.
Molecules ; 18(4): 3745-59, 2013 Mar 25.
Artículo en Inglés | MEDLINE | ID: mdl-23529034

RESUMEN

In this work, a steroidal gelator containing an imine bond was synthesized, and its gelation behavior as well as a sensitivity of its gels towards acids was investigated. It was shown that the gels were acid-responsive, and that the gelator molecules could be prepared either by a conventional synthesis or directly in situ during the gel forming process. The gels prepared by both methods were studied and it was found that they had very similar macro- and microscopic properties. Furthermore, the possibility to use the gels as carriers for aromatic drugs such as 5-chloro-8-hydroxyquinoline, pyrazinecarboxamide, and antipyrine was investigated and the prepared two-component gels were studied with regard to their potential applications in drug delivery, particularly in a pH-controlled drug release.


Asunto(s)
Sistemas de Liberación de Medicamentos/métodos , Geles/química , Cloroquinolinoles/química , Preparaciones de Acción Retardada , Concentración de Iones de Hidrógeno , Espectroscopía de Resonancia Magnética
17.
Int J Mol Sci ; 14(3): 4444-60, 2013 Feb 25.
Artículo en Inglés | MEDLINE | ID: mdl-23439552

RESUMEN

1H and 13C NMR spectra of eleven 2-phenacylbenzoxazoles (ketimine form) show that their CDCl(3)-solutions contains also (Z)-2-(benzo[d]oxazol-2-yl)-1-phenylethenols (enolimine form). Intramolecular hydrogen bonding in the latter tautomer was found to be significantly weaker than that one in respective (Z)-2-(2-hydroxy-2-phenylvinyl)pyridines. Integrals of the 1H NMR signals were used to evaluate the molar ratio of the tautomers. Strong electron-donating substituents were found to stabilize the ketimine tautomer. pK(T) (negative logarithm of the equilibrium constant, K(T) = [ketimine]/[enolimine]) was found to be linearly dependent on the Hammett substituent constant σ. The results of the MP2 ab initio calculations reveal enolimine including an intramolecular OH…N hydrogen bond to be the most stable form both with electron-donor and electron-acceptor substituents. The stability of ketimines is an intermediate of those found for enolimines and enaminones i.e., (E)-2-(benzo[d]oxazol-2(3H)-ylidene)-1-phenylethanones. 13C CPMAS NMR spectral data reveal that in the crystalline state the ketimine tautomer is predominant in p-NMe(2) substituted congener. On the other hand, enolimine forms were detected there when the substituent has less electron-donating character or when it is an electron-acceptor by character.

18.
J Mater Chem B ; 1(45): 6201-6212, 2013 Dec 07.
Artículo en Inglés | MEDLINE | ID: mdl-32261693

RESUMEN

Recently, investigation of hydrogels has gained ever increasing attention mostly because of their biomedical and pharmaceutical properties, and novel hydrogelators are constantly studied to find functional applications. Bisphosphonates (BPs) are well-known compounds applicable in different fields but are mostly used in clinics as drugs for bone-related diseases. In this study, a novel class of BP-hydrogelators together with a BP-organogelator was found, and the gelating abilities of the compounds were studied. Several techniques to analyze the structure and the properties of the formed gels were used, including solid state 13C and 31P CPMAS and solution state NMR spectroscopy, IR spectroscopy, PXRD, thermoanalysis, as well as SEM.

19.
J Phys Chem A ; 117(1): 252-6, 2013 Jan 10.
Artículo en Inglés | MEDLINE | ID: mdl-23252343

RESUMEN

The series of nine 2-benzoylmethylenequinoline difluoroborates have been synthesized and characterized by multinuclear magnetic resonance, X-ray diffraction (XRD), and computational methods. The through-space spin-spin couplings between (19)F and (1)H/(13)C nuclei have been observed in solution. The NMR chemical shifts have been correlated to the Hammett substituent constants. The crystal structures of six compounds have been solved by XRD. For two derivatives the X-ray wave function refinement was performed to evaluate the character of bonds in the NBF(2)O moiety by topological and integrated bond descriptors.

20.
J Org Chem ; 77(21): 9609-19, 2012 Nov 02.
Artículo en Inglés | MEDLINE | ID: mdl-23020688

RESUMEN

Intermolecular interactions of ten 2-acylamino and 2,4-bis(acylamino)pyrimidines (7 of which are previously unknown) have been investigated by X-ray structural, quantum chemical (DFT), and NMR spectral methods. Especially the concentration dependencies of the (1)H NMR chemical shifts and titrations with other molecules capable of multiple hydrogen bonding provided useful information regarding their association via triple or quadruple hydrogen bonding, which is controlled by the conformational preferences of 2-acylamino- and 2,4-bis(acylamino)pyrimidines. On comparison of the properties of 2-acylamino- and 2,4-bis(acylamino)pyrimidines with the corresponding pyridines, an additional nitrogen in the heterocyclic ring is the crucial factor in explaining the stability of various conformers and dimers of pyrimidines. Computational modeling of their dimerization (self-association) and heteroassociation supports the experimental findings. The substituent effects in 2-acylamino- and 2,4-bis(acylamino)pyrimidines are discussed via inter- and intramolecular terms. The subtle balance between several structural factors and their influence on the aggregation of studied pyrimidines was confirmed also by variable-temperature NMR and NOE experiments. X-ray structures of 2-methyl- and 2-adamantyl-CONH-pyrimidines revealed very different intermolecular interactions, showing the importance of the substituent size on the self-assembly process. As a whole NMR spectral, X-ray structural, and computational data of 2-acylamino- and 2,4-bis(acylamino)pyrimidines can be interpreted in terms of multiple intra-/intermolecular interactions.


Asunto(s)
Pirimidinas/química , Cristalografía por Rayos X , Enlace de Hidrógeno , Espectroscopía de Resonancia Magnética , Conformación Molecular , Teoría Cuántica , Difracción de Rayos X
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