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Chem Biol ; 22(8): 1018-29, 2015 Aug 20.
Artículo en Inglés | MEDLINE | ID: mdl-26235055

RESUMEN

The terminal reductase (R) domain from the non-ribosomal peptide synthetase (NRPS) module MxaA in Stigmatella aurantiaca Sga15 catalyzes a non-processive four-electron reduction to produce the myxalamide family of secondary metabolites. Despite widespread use in nature, a lack of structural and mechanistic information concerning reductive release from polyketide synthase (PKS) and NRPS assembly lines principally limits our ability to redesign R domains with altered or improved activity. Here we report crystal structures for MxaA R, both in the absence and, for the first time, in the presence of the NADPH cofactor. Molecular dynamics simulations were employed to provide a deeper understanding of this domain and further identify residues critical for structural integrity, substrate binding, and catalysis. Aggregate computational and structural findings provided a basis for mechanistic investigations and, in the process, delivered a rationally altered variant with improved activity toward highly reduced substrates.


Asunto(s)
Alcoholes/química , Péptido Sintasas/química , Sintasas Poliquetidas/química , Sintasas Poliquetidas/metabolismo , Alcoholes/síntesis química , Alcoholes/metabolismo , Simulación por Computador , Cristalografía por Rayos X , Simulación de Dinámica Molecular , NADP/química , NADP/metabolismo , Oxidorreductasas/metabolismo , Péptido Sintasas/análisis , Péptido Sintasas/metabolismo , Polienos/química , Ingeniería de Proteínas , Estructura Terciaria de Proteína , Stigmatella aurantiaca/enzimología , Stigmatella aurantiaca/metabolismo
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