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1.
Infect Genet Evol ; 81: 104235, 2020 07.
Artículo en Inglés | MEDLINE | ID: mdl-32035245

RESUMEN

BACKGROUND: In the recent past (1997-2012), Northern Ireland in the United Kingdom suffered an outbreak of Brucella abortus, which at its height affected over 200 cattle herds. Initially, isolates were characterized using multi-locus variable number tandem repeats analysis (MLVA). While informative in this setting, hyper-variability in some loci limited the resolution necessary to infer fine-scale disease transmission networks. Consequently, we applied whole-genome sequencing to isolates from this outbreak to evaluate higher resolution markers for disease epizootiology. RESULTS: Phylogenetic analysis revealed that the B. abortus outbreak in Northern Ireland was caused by two distinct pathogen lineages. One contained isolates consistent with the 1997-2012 outbreak being linked to a previous endemic infection thought eradicated. The dominant second lineage exhibited little genetic diversity throughout the recrudescent outbreak, with limited population sub-structure evident. This finding was inconsistent with prior MLVA molecular characterizations that suggested the presence of seven clonal complexes. Spatio-temporal modeling revealed a significant association of pairwise SNP differences between isolates and geographic distances. However, effect sizes were very small due to reduced pathogen diversity. CONCLUSIONS: Genome sequence data suggested that hyper-variability in some MLVA loci contributed to an overestimate of pathogen diversity in the most recent outbreak. The low diversity observed in our genomic dataset made it inappropriate to apply phylodynamic methods to these data. We conclude that maintaining data repositories of genome sequence data will be invaluable for source attribution/epizootiological inference should recrudescence ever re-occur. However genomic epizootiological methods may have limited utility in some settings, such as when applied to recrudescent/re-emergent infections of slowly-evolving bacterial pathogens.


Asunto(s)
Brucella abortus/genética , Brucelosis Bovina/epidemiología , Brucelosis Bovina/microbiología , Animales , Bovinos , Brotes de Enfermedades , Variación Genética/genética , Genómica/métodos , Genotipo , Ganado/genética , Ganado/microbiología , Repeticiones de Minisatélite/genética , Epidemiología Molecular/métodos , Tipificación de Secuencias Multilocus/métodos , Irlanda del Norte/epidemiología , Filogenia , Polimorfismo de Nucleótido Simple/genética , Secuenciación Completa del Genoma/métodos
2.
Aust Health Rev ; 42(1): 59-65, 2018 Feb.
Artículo en Inglés | MEDLINE | ID: mdl-28104042

RESUMEN

Objective The aim of the present study was to audit the current use of medical records to determine completeness and concordance with other sources of medical information. Methods Medical records for 40 patients from each of five Melbourne major metropolitan hospitals were randomly selected (n=200). A quantitative audit was performed for detailed patient information and medical record keeping, as well as data collection, storage and utilisation. Using each hospital's current online clinical database, scanned files and paperwork available for each patient audited, the reviewers sourced as much relevant information as possible within a 30-min time allocation from both the record and the discharge summary. Results Of all medical records audited, 82% contained medical and surgical history, allergy information and patient demographics. All audited discharge summaries lacked at least one of the following: demographics, medication allergies, medical and surgical history, medications and adverse drug event information. Only 49% of records audited showed evidence the discharge summary was sent outside the institution. Conclusions The quality of medical data captured and information management is variable across hospitals. It is recommended that medical history documentation guidelines and standardised discharge summaries be implemented in Australian healthcare services. What is known about this topic? Australia has a complex health system, the government has approved funding to develop a universal online electronic medical record system and is currently trialling this in an opt-out style in the Napean Blue Mountains (NSW) and in Northern Queensland. The system was originally named the personally controlled electronic health record but has since been changed to MyHealth Record (2016). In Victoria, there exists a wide range of electronic health records used to varying degrees, with some hospitals still relying on paper-based records and many using scanned medical records. This causes inefficiencies in the recall of patient information and can potentially lead to incidences of adverse drug events. What does this paper add? This paper supports the concept of a shared medical record system using 200 audited patient records across five Victorian metropolitan hospitals, comparing the current information systems in place for healthcare practitioners to retrieve data. This research identifies the degree of concordance between these sources of information and in doing so, areas for improvement. What are the implications for practitioners? Implications of this research are the improvements in the quality, storage and accessibility of medical data in Australian healthcare systems. This is a relevant issue in the current Australian environment where no guidelines exist across the board in medical history documentation or in the distribution of discharge summaries to other healthcare providers (general practitioners, etc).


Asunto(s)
Documentación/métodos , Documentación/normas , Registros Electrónicos de Salud/normas , Centros Médicos Académicos , Adolescente , Adulto , Anciano , Anciano de 80 o más Años , Femenino , Hospitales , Humanos , Internet , Masculino , Auditoría Médica , Registros Médicos , Persona de Mediana Edad , Control de Calidad , Victoria , Adulto Joven
5.
PLoS One ; 10(9): e0136721, 2015.
Artículo en Inglés | MEDLINE | ID: mdl-26325586

RESUMEN

BACKGROUND: Brucellosis is the most common bacterial zoonoses worldwide. Bovine brucellosis caused by Brucella abortus has far reaching animal health and economic impacts at both the local and national levels. Alongside traditional veterinary epidemiology, the use of molecular typing has recently been applied to inform on bacterial population structure and identify epidemiologically-linked cases of infection. Multi-locus variable number tandem repeat VNTR analysis (MLVA) was used to investigate the molecular epidemiology of a well-characterised Brucella abortus epidemic in Northern Ireland involving 387 herds between 1991 and 2012. RESULTS: MLVA identified 98 unique B. abortus genotypes from disclosing isolates in the 387 herds involved in the epidemic. Clustering algorithms revealed the relatedness of many of these genotypes. Combined with epidemiological information on chronology of infection and geographic location, these genotype data helped to identify 7 clonal complexes which underpinned the outbreak over the defined period. Hyper-variability of some VNTR loci both within herds and individual animals led to detection of multiple genotypes associated with single outbreaks. However with dense sampling, these genotypes could still be associated with specific clonal complexes thereby permitting inference of epidemiological links. MLVA- based epidemiological monitoring data were congruent with an independent classical veterinary epidemiology study carried out in the same territory. CONCLUSIONS: MLVA is a useful tool in ongoing disease surveillance of B. abortus outbreaks, especially when combined with accurate epidemiological information on disease tracings, geographical clustering of cases and chronology of infection.


Asunto(s)
Brucella abortus/genética , Brucelosis Bovina/epidemiología , Animales , Brucelosis Bovina/microbiología , Bovinos , Femenino , Genotipo , Repeticiones de Minisatélite/genética , Epidemiología Molecular , Irlanda del Norte/epidemiología , Análisis Espacio-Temporal
6.
JAMA ; 313(3): 231-3, 2015 Jan 20.
Artículo en Inglés | MEDLINE | ID: mdl-25602983
9.
Risk Anal ; 29(2): 159-70, 2009 Feb.
Artículo en Inglés | MEDLINE | ID: mdl-19144069

RESUMEN

Computational models support environmental regulatory activities by providing the regulator an ability to evaluate available knowledge, assess alternative regulations, and provide a framework to assess compliance. But all models face inherent uncertainties because human and natural systems are always more complex and heterogeneous than can be captured in a model. Here, we provide a summary discussion of the activities, findings, and recommendations of the National Research Council's Committee on Regulatory Environmental Models, a committee funded by the U.S. Environmental Protection Agency to provide guidance on the use of computational models in the regulatory process. Modeling is a difficult enterprise even outside the potentially adversarial regulatory environment. The demands grow when the regulatory requirements for accountability, transparency, public accessibility, and technical rigor are added to the challenges. Moreover, models cannot be validated (declared true) but instead should be evaluated with regard to their suitability as tools to address a specific question. The committee concluded that these characteristics make evaluation of a regulatory model more complex than simply comparing measurement data with model results. The evaluation also must balance the need for a model to be accurate with the need for a model to be reproducible, transparent, and useful for the regulatory decision at hand. Meeting these needs requires model evaluation to be applied over the "life cycle" of a regulatory model with an approach that includes different forms of peer review, uncertainty analysis, and extrapolation methods than those for nonregulatory models.


Asunto(s)
Medición de Riesgo , Conservación de los Recursos Naturales , Toma de Decisiones , Exposición a Riesgos Ambientales , Humanos , Modelos Teóricos , Formulación de Políticas , Probabilidad , Reproducibilidad de los Resultados , Programas Informáticos , Estados Unidos , United States Environmental Protection Agency
10.
MCN Am J Matern Child Nurs ; 33(5): 315-9, 2008.
Artículo en Inglés | MEDLINE | ID: mdl-18758336

RESUMEN

PURPOSE: To examine the impact of various breastfeeding outcomes of three cohorts receiving different methods of prenatal breastfeeding education. METHODS: Retrospective cohort design with patients attending a breastfeeding education class at an Army medical center. Controls were matched for sponsor rank, marital status, and smoking status. One hundred ninety-four mothers who expressed intent to breastfeed received breastfeeding education as follows: (a) a class that used video demonstration and group teaching by a lactation consultant, (b) a new mothers' support group with one-on-one teaching prenatally and weekly meetings postpartum, taught by a lactation consultant and a pediatrician, and (c) a control group educated at prenatal visits only. Descriptive statistics, chi-square, ANOVA, unpaired t test, and logistic regression were used to analyze the data. RESULTS: Women who attended prenatal breastfeeding classes had significantly increased breastfeeding at 6 months when compared to controls (p = .01). There was no significant difference in rates between types of classes offered (p = .45). CLINICAL IMPLICATIONS: Prenatal breastfeeding education can influence the amount of time women breastfeed. All providers of prenatal care should consider offering such classes in order to improve breastfeeding rates.


Asunto(s)
Lactancia Materna/estadística & datos numéricos , Madres/educación , Educación del Paciente como Asunto/organización & administración , Atención Prenatal/organización & administración , Análisis de Varianza , Lactancia Materna/psicología , Distribución de Chi-Cuadrado , Femenino , Conocimientos, Actitudes y Práctica en Salud , Promoción de la Salud/organización & administración , Humanos , Intención , Modelos Logísticos , Madres/psicología , Madres/estadística & datos numéricos , Enfermeras Clínicas/organización & administración , Investigación en Evaluación de Enfermería , Evaluación de Resultado en la Atención de Salud , Atención Posnatal/organización & administración , Embarazo , Evaluación de Programas y Proyectos de Salud , Estudios Retrospectivos , Grupos de Autoayuda/organización & administración , Apoyo Social , Factores de Tiempo , Grabación de Cinta de Video
11.
J Expo Sci Environ Epidemiol ; 17 Suppl 2: S97-105, 2007 Dec.
Artículo en Inglés | MEDLINE | ID: mdl-18079771

RESUMEN

In December 2006, the U.S. Environmental Protection Agency (EPA) sponsored a 2-day workshop on "Interpretation of Epidemiologic Studies of Multipollutant Exposure and Health Effects" in Chapel Hill, NC. The final session at this workshop was devoted to assessing the biological plausibility of epidemiological findings with regard to criteria air pollutants. The presentations and the panel contributions of this last session primarily focused on controlled exposure studies and led to wide-ranging discussions, some of which were provocative. The panel summary provides some guidance to future evaluations of the biological plausibility of the epidemiological reports on criteria pollutants and is intended to stimulate thinking, without drawing any definitive conclusions. This paper does not approach, nor was it intended to approach, the more formal analytical approach such as that used in EPA's development of its Science Assessment Document for the criteria pollutants.


Asunto(s)
Contaminación del Aire/análisis , Exposición a Riesgos Ambientales/análisis , Salud Ambiental/métodos , Estudios Epidemiológicos , Proyectos de Investigación , Contaminación del Aire/efectos adversos , Contaminación del Aire/prevención & control , Interpretación Estadística de Datos , Exposición a Riesgos Ambientales/efectos adversos , Exposición a Riesgos Ambientales/prevención & control , Salud Ambiental/legislación & jurisprudencia , Salud Ambiental/normas , Humanos , Modelos Biológicos , North Carolina , Investigación/tendencias , Medición de Riesgo , Estados Unidos , United States Environmental Protection Agency
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