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Nanopore sequencing of IPNV vp2 gene in Peruvian Andean trout (Oncorhynchus mykiss) cultures.

Tapia, Stephanie; Orellana, Joseph; Duran, Yerson; Rodriguez, Jose; Angulo, Derly; Dominguez-Mendoza, Luz; Grabiel, Sandra; Silva, Jose; Caballero, Romina; Zapata, Katherine; Gómez, Muriel; Tataje-Lavanda, Luis; Velazco, Rodolfo.

Microbiol Resour Announc ; 13(9): e0019024, 2024 Sep 10.

Artículo en Inglés | MEDLINE | ID: mdl-39162459

RESUMEN

Nanopore sequencing of the infectious pancreatic necrosis virus (IPNV) vp2 gene from Andean trout cultures in Peru reveals genogroups 1 and 5. This insight aids in understanding strain diversity and pathogenicity, vital for effective disease surveillance, and control measures in aquaculture.

Whole genome sequencing of nine Vibrio parahaemolyticus strains encoding (Pir) toxin-like genes from shrimp cultures in northern Peru using Oxford Nanopore technology.

Tapia-Chirinos, Stephanie; Salcedo-Mejia, Luis Alberto; Domínguez-Mendoza, Luz; Nuñure-Ortega, Jeferson; Ramos-Espinoza, Fernando; Gómez-Sánchez, Muriel; Tataje-Lavanda, Luis; Velazco-Peña, Rodolfo.

Microbiol Resour Announc ; 13(3): e0051123, 2024 Mar 12.

Artículo en Inglés | MEDLINE | ID: mdl-38345394

RESUMEN

Nine Peruvian isolates of Vibrio parahaemolyticus were characterized through sequencing, revealing the presence of simple sequence repeat, Pir toxin-like genes, and genes associated with antibiotic resistance, toxic components, and transposable elements. These findings expand our understanding of the genetic diversity, disease resistance, and virulence in cultivated shrimp populations in Peru.

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