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1.
Entropy (Basel) ; 26(8)2024 Jul 26.
Artículo en Inglés | MEDLINE | ID: mdl-39202102

RESUMEN

The formation of congestion on an urban road network is a key issue for the development of sustainable mobility in future smart cities. In this work, we propose a reductionist approach by studying the stationary states of a simple transport model using a random process on a graph, where each node represents a location and the link weights give the transition rates to move from one node to another, representing the mobility demand. Each node has a maximum flow rate and a maximum load capacity, and we assume that the average incoming flow equals the outgoing flow. In the approximation of the single-step process, we are able to analytically characterize the traffic load distribution on the single nodes using a local maximum entropy principle. Our results explain how congested nodes emerge as the total traffic load increases, analogous to a percolation transition where the appearance of a congested node is an independent random event. However, using numerical simulations, we show that in the more realistic case of synchronous dynamics for the nodes, entropic forces introduce correlations among the node states and favor the clustering of empty and congested nodes. Our aim is to highlight the universal properties of congestion formation and, in particular, to understand the role of traffic load fluctuations as a possible precursor of congestion in a transport network.

2.
IEEE Trans Neural Netw Learn Syst ; 30(11): 3326-3337, 2019 11.
Artículo en Inglés | MEDLINE | ID: mdl-30951479

RESUMEN

Long short-term memory (LSTM) networks have recently shown remarkable performance in several tasks that are dealing with natural language generation, such as image captioning or poetry composition. Yet, only few works have analyzed text generated by LSTMs in order to quantitatively evaluate to which extent such artificial texts resemble those generated by humans. We compared the statistical structure of LSTM-generated language to that of written natural language, and to those produced by Markov models of various orders. In particular, we characterized the statistical structure of language by assessing word-frequency statistics, long-range correlations, and entropy measures. Our main finding is that while both LSTM- and Markov-generated texts can exhibit features similar to real ones in their word-frequency statistics and entropy measures, LSTM-texts are shown to reproduce long-range correlations at scales comparable to those found in natural language. Moreover, for LSTM networks, a temperature-like parameter controlling the generation process shows an optimal value-for which the produced texts are closest to real language-consistent across different statistical features investigated.


Asunto(s)
Cadenas de Markov , Memoria a Largo Plazo , Procesamiento de Lenguaje Natural , Redes Neurales de la Computación , Humanos
3.
Sci Rep ; 8(1): 15817, 2018 10 25.
Artículo en Inglés | MEDLINE | ID: mdl-30361485

RESUMEN

Biologists have long sought a way to explain how statistical properties of genetic sequences emerged and are maintained through evolution. On the one hand, non-random structures at different scales indicate a complex genome organisation. On the other hand, single-strand symmetry has been scrutinised using neutral models in which correlations are not considered or irrelevant, contrary to empirical evidence. Different studies investigated these two statistical features separately, reaching minimal consensus despite sustained efforts. Here we unravel previously unknown symmetries in genetic sequences, which are organized hierarchically through scales in which non-random structures are known to be present. These observations are confirmed through the statistical analysis of the human genome and explained through a simple domain model. These results suggest that domain models which account for the cumulative action of mobile elements can explain simultaneously non-random structures and symmetries in genetic sequences.


Asunto(s)
Secuencia de Bases/genética , Algoritmos , Cromosomas Humanos Par 1/genética , Humanos , Modelos Genéticos , Estadística como Asunto
4.
Philos Trans A Math Phys Eng Sci ; 374(2063)2016 03 13.
Artículo en Inglés | MEDLINE | ID: mdl-26857665

RESUMEN

We perform a statistical study of the distances between successive occurrences of a given dinucleotide in the DNA sequence for a number of organisms of different complexity. Our analysis highlights peculiar features of the CG dinucleotide distribution in mammalian DNA, pointing towards a connection with the role of such dinucleotide in DNA methylation. While the CG distributions of mammals exhibit exponential tails with comparable parameters, the picture for the other organisms studied (e.g. fish, insects, bacteria and viruses) is more heterogeneous, possibly because in these organisms DNA methylation has different functional roles. Our analysis suggests that the distribution of the distances between CG dinucleotides provides useful insights into characterizing and classifying organisms in terms of methylation functionalities.


Asunto(s)
Metilación de ADN , Modelos Genéticos , Nucleótidos/genética , Animales , Humanos
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