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1.
Phys Rev E Stat Nonlin Soft Matter Phys ; 75(1 Pt 2): 016308, 2007 Jan.
Artículo en Inglés | MEDLINE | ID: mdl-17358254

RESUMEN

We investigate the vorticity dynamics in a turbulent vortex using scattering of acoustic waves. Two ultrasonic beams are adjusted to probe simultaneously two spatial scales in a given volume of the flow, thus allowing a dual channel recording of the dynamics of coherent vorticity structures. Our results show that this allows one to measure the average energy transfer time between different spatial length scales, and that such transfer goes faster at smaller scales.

2.
Genet. mol. res. (Online) ; Genet. mol. res. (Online);5(1): 169-181, Mar. 31, 2006. ilus, graf, tab
Artículo en Inglés | LILACS | ID: lil-449135

RESUMEN

Slippage is an important sequencing problem that can occur in EST projects. However, very few studies have addressed this. We propose three new methods to detect slippage artifacts: arithmetic mean method, geometric mean method, and echo coverage method. Each method is simple and has two different strategies for processing sequences: suffix and subsequence. Using the 291,689 EST sequences produced in the SUCEST project, we performed comparative tests between our proposed methods and the SUCEST method. The subsequence strategy is better than the suffix strategy, because it is not anchored at the end of the sequence, so it is more flexible to find slippage at the beginning of the EST. In a comparison with the SUCEST method, the advantage of our methods is that they do not discard the majority of the sequences marked as slippage, but instead only remove the slipped artifact from the sequence. Based on our tests the echo coverage method with subsequence strategy shows the best compromise between slippage detection and ease of calibration.


Asunto(s)
Humanos , Análisis de Secuencia de ADN/métodos , Etiquetas de Secuencia Expresada , Modelos Genéticos , Saccharum/genética , Técnicas Genéticas , Reordenamiento Génico , Replicación del ADN
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